RLG00000029179

Receptor protein kinase-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
N/A
Physical Location & Seq
Reverse (-)
34123056 .. 34123888
833 bp
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UTR
Exon/CDS
Intron
RLM00000029179

Sequence Viewer

Length: 405 bp
ATGGAAGTGAATGAGAAGTGTGATGTTTATAGCTTTGGAGTGGTGACATTGGAGACTGTTATGAGAAGACATCCTGGAGATCTTCTCTCATCTGTATCTTCGGGGGCGTGTTCTTCATCATCATTGTCAACTGCATTACCAGCCCATCAAATGCCAGTTGTGGTTTTTTTTGACCAGCGCATTTCCCGTCCTACAGGAGAAGTTGTCTCTGTTGTGAAGATTCCTATCATCCCTCCAAAAGAAAGCAATTTTCTCCCCCAATTCCAGATTGCCCTGAACTTGGCCCTCTCCTTCTCCCTCAGCTCCGTCTTCACCTCTGCCAACCTCATCGTCGCCGCTGCCTCCGCCTCCGCCTCCGGCTCTCTCCACCGTGCTGTCACCTCCGCCATCACTTGCCTCCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

135

Amino Acids

14.13

Weight (kDa)

6.89

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 336, 345, 351, 384
AfiI CCNNNNNNNGG 1 cut(s) 280
AjnI CCWGG 1 cut(s) 73
AluBI AGCT 2 cut(s) 33, 303
AluI AGCT 2 cut(s) 33, 303
Alw26I GTCTC 2 cut(s) 47, 211
AoxI GGCC 1 cut(s) 282
ApeKI GCWGC 1 cut(s) 338
AspLEI GCGC 1 cut(s) 180
AspS9I GGNCC 1 cut(s) 283
AsuHPI GGTGA 3 cut(s) 55, 304, 370
BbsI GAAGAC 2 cut(s) 73, 301
BbvCI CCTCAGC 1 cut(s) 299
BbvI GCAGC 1 cut(s) 325
BccI CCATC 2 cut(s) 153, 395
BciT130I CCWGG 1 cut(s) 75
BcoDI GTCTC 2 cut(s) 47, 211
BfmI CTRYAG 1 cut(s) 192
BglII AGATCT 1 cut(s) 79
BisI GCNGC 2 cut(s) 336, 339
BlsI GCNGC 2 cut(s) 337, 340
Bme1390I CCNGG 1 cut(s) 75
BmgT120I GGNCC 1 cut(s) 283
BmrFI CCNGG 1 cut(s) 75
BpiI GAAGAC 2 cut(s) 73, 301
BplI GAGNNNNNCTC 2 cut(s) 69, 101
BpmI CTGGAG 1 cut(s) 96
Bpu10I CCTNAGC 1 cut(s) 299
BsaBI GATNNNNATC 1 cut(s) 224
BsaXI ACNNNNNCTCC 2 cut(s) 189, 219
Bsc4I CCNNNNNNNGG 1 cut(s) 280
Bse1I ACTGG 1 cut(s) 155
Bse8I GATNNNNATC 1 cut(s) 224
BseBI CCWGG 1 cut(s) 75
BseGI GGATG 2 cut(s) 70, 228
BseJI GATNNNNATC 1 cut(s) 224
BseLI CCNNNNNNNGG 1 cut(s) 280
BseMII CTCAG 1 cut(s) 313
BseNI ACTGG 1 cut(s) 155
BseXI GCAGC 1 cut(s) 325
BshFI GGCC 1 cut(s) 284
BsiSI CCGG 1 cut(s) 357
BslI CCNNNNNNNGG 1 cut(s) 280
BsmAI GTCTC 2 cut(s) 47, 211
BsnI GGCC 1 cut(s) 284
Bsp143I GATC 1 cut(s) 79
BspACI CCGC 4 cut(s) 336, 345, 351, 384
BspANI GGCC 1 cut(s) 284
BspCNI CTCAG 1 cut(s) 312
BsrI ACTGG 1 cut(s) 155
BssMI GATC 1 cut(s) 79
Bst2UI CCWGG 1 cut(s) 75
Bst4CI ACNGT 2 cut(s) 58, 371
BstDEI CTNAG 1 cut(s) 299
BstF5I GGATG 2 cut(s) 70, 228
BstHHI GCGC 1 cut(s) 180
BstKTI GATC 1 cut(s) 82
BstMAI GTCTC 2 cut(s) 47, 211
BstMBI GATC 1 cut(s) 79
BstMWI GCNNNNNNNGC 2 cut(s) 140, 344
BstNI CCWGG 1 cut(s) 75
BstSCI CCNGG 1 cut(s) 73
BstSFI CTRYAG 1 cut(s) 192
BstV1I GCAGC 1 cut(s) 325
BstV2I GAAGAC 2 cut(s) 73, 301
BstX2I RGATCY 1 cut(s) 79
BstYI RGATCY 1 cut(s) 79
BsuRI GGCC 1 cut(s) 284
BtsCI GGATG 2 cut(s) 70, 228
CfoI GCGC 1 cut(s) 180
Cfr13I GGNCC 1 cut(s) 283
CviJI RGCY 5 cut(s) 33, 143, 284, 303, 360
CviKI_1 RGCY 5 cut(s) 33, 143, 284, 303, 360
DdeI CTNAG 1 cut(s) 299
DpnI GATC 1 cut(s) 81
DpnII GATC 1 cut(s) 79
EciI GGCGGA 3 cut(s) 334, 340, 373
EcoRII CCWGG 1 cut(s) 73
FaiI YATR 2 cut(s) 30, 62
Fnu4HI GCNGC 2 cut(s) 336, 339
FokI GGATG 2 cut(s) 57, 215
Fsp4HI GCNGC 2 cut(s) 336, 339
GlaI GCGC 1 cut(s) 179
GluI GCNGC 2 cut(s) 336, 339
GsuI CTGGAG 1 cut(s) 96
HaeIII GGCC 1 cut(s) 284
HapII CCGG 1 cut(s) 357
HhaI GCGC 1 cut(s) 180
Hin6I GCGC 1 cut(s) 178
HinP1I GCGC 1 cut(s) 178
HincII GTYRAC 1 cut(s) 129
HindII GTYRAC 1 cut(s) 129
HinfI GANTC 1 cut(s) 220
HpaII CCGG 1 cut(s) 357
HphI GGTGA 3 cut(s) 55, 304, 370
Hpy166II GTNNAC 1 cut(s) 129
Hpy188III TCNNGA 1 cut(s) 265
Hpy8I GTNNAC 1 cut(s) 129
Hpy99I CGWCG 1 cut(s) 335
HpyAV CCTTC 1 cut(s) 301
HpyCH4III ACNGT 2 cut(s) 58, 371
HpyCH4V TGCA 1 cut(s) 134
HpyF10VI GCNNNNNNNGC 2 cut(s) 140, 344
HpyF3I CTNAG 1 cut(s) 299
HspAI GCGC 1 cut(s) 178
Kzo9I GATC 1 cut(s) 79
LmnI GCTCC 1 cut(s) 308
LpnPI CCDG 9 cut(s) 60, 87, 153, 168, 180, 188, 278, 287, 370
Lsp1109I GCAGC 1 cut(s) 325
MaeIII GTNAC 2 cut(s) 43, 376
MalI GATC 1 cut(s) 81
MboI GATC 1 cut(s) 79
MboII GAAGA 6 cut(s) 74, 78, 90, 105, 229, 301
MflI RGATCY 1 cut(s) 79
MluCI AATT 2 cut(s) 247, 260
MnlI CCTC 9 cut(s) 243, 296, 308, 325, 335, 352, 358, 364, 391
MseI TTAA 1 cut(s) 403
MspA1I CMGCKG 1 cut(s) 338
MspI CCGG 1 cut(s) 357
MspR9I CCNGG 1 cut(s) 75
MvaI CCWGG 1 cut(s) 75
MwoI GCNNNNNNNGC 2 cut(s) 140, 344
NdeII GATC 1 cut(s) 79
NmuCI GTSAC 2 cut(s) 43, 376
PfeI GAWTC 1 cut(s) 220
PfoI TCCNGGA 1 cut(s) 73
PkrI GCNGC 2 cut(s) 337, 340
Psp6I CCWGG 1 cut(s) 73
PspGI CCWGG 1 cut(s) 73
PspPI GGNCC 1 cut(s) 283
PsuI RGATCY 1 cut(s) 79
SaqAI TTAA 1 cut(s) 403
SatI GCNGC 2 cut(s) 336, 339
Sau3AI GATC 1 cut(s) 79
Sau96I GGNCC 1 cut(s) 283
ScrFI CCNGG 1 cut(s) 75
SetI ASST 5 cut(s) 35, 305, 317, 327, 383
SfcI CTRYAG 1 cut(s) 192
Sse9I AATT 2 cut(s) 247, 260
SsiI CCGC 4 cut(s) 336, 345, 351, 384
StyD4I CCNGG 1 cut(s) 73
TaaI ACNGT 2 cut(s) 58, 371
TasI AATT 2 cut(s) 247, 260
TauI GCSGC 1 cut(s) 338
TfiI GAWTC 1 cut(s) 220
Tru1I TTAA 1 cut(s) 403
Tru9I TTAA 1 cut(s) 403
TseFI GTSAC 2 cut(s) 43, 376
TseI GCWGC 1 cut(s) 338
Tsp45I GTSAC 2 cut(s) 43, 376
TspDTI ATGAA 1 cut(s) 105
TspGWI ACGGA 1 cut(s) 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.