RLG00000030794

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
N/A
Physical Location & Seq
Forward (+)
67662902 .. 67663961
1060 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030794

Sequence Viewer

Length: 972 bp
ATGATTGTAGCAGAAACTGCCTCGACGATTGTAACTGTCTCGTCGCTGTTATATTTAATGGGGGCTGCATTGATAAGAAGAAACTGCCACTCTCGAATGGAAGGCAAGACTGGAATTCATACGGCAAGGCTCTCATCAAAATCTGATGCTTTTGAGAATCCTGTATCTCGAGATTCATACACAGAAAAGAAAGATCAGAAAACTCTCATCTTAGTTGGAGCACTCCTTCTAGGTAGCTCTGTGTTTCTCAACTTCCTATTTCTTGCAGCAATTGCTTTGCTTGTTTTCTATACATACCAAAAAACAAATAGGGTTATCACTAGCACATCCAGTATTTTGGAAGCAAATCTACGCTCTTTTACTTACAAAGAGCTTGAACAAGCCACAGATGGTTTCAGAGAAGAACTTGGAAGAAGGGCTTTTGGCACTGTGTATAAGGGAATCAAATCATCTGTAAGCTCCACAAGCTATGTGGCAATCAAGAAGTTGGACAAGGTGGCAAGGGCAAATAAACTCATAGTCTATGAGTTTATGAGTAATGGAACACTGGCTAGCTTTCTGTTTGGGATTTCAAGGCCTGATTGGAACAAACGAATCCAAATTGCTTTTGGCATTTCAAGAGGGCTGATATACTTACACCATGAGTGTAGCACTCAGATCATCCACTGTTATATCAAACCCCCCAACATACTTCTCGATGATTCATTCACAGCAAGGATTTCGGATTTCAGATTGGCAAAGCTTCTGCTAAGTGATCAAACTCGGACTCATACAGTCATTAGAGGGACCAGAGGGTATGTTGCACCAGAATGGTTCAGAAATACTCCAGTTACTGCAAAGGTTGATGCTTACATTTATGGGGTGATGCTGCTGGAGATTATATGTTGCAGGAAGAGCCTCGAAATGGAAAGGGAAAATAAAGAAGAAAAGATACTGACTGGGTTTACGATTGCTACAAGCAAAGGAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

324

Amino Acids

36.31

Weight (kDa)

9.5

Isoelectric Point (pI)

28.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 169 - 300 1.9e-19 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 171 - 311 2.2e-23 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 114
AfiI CCNNNNNNNGG 1 cut(s) 904
AgsI TTSAA 3 cut(s) 377, 573, 618
AluBI AGCT 6 cut(s) 237, 373, 459, 468, 555, 742
AluI AGCT 6 cut(s) 237, 373, 459, 468, 555, 742
Alw21I GWGCWC 1 cut(s) 223
Alw26I GTCTC 1 cut(s) 43
AlwNI CAGNNNCTG 2 cut(s) 17, 833
Ama87I CYCGRG 1 cut(s) 168
AoxI GGCC 1 cut(s) 575
ApeKI GCWGC 3 cut(s) 65, 266, 868
ApoI RAATTY 1 cut(s) 114
AspS9I GGNCC 1 cut(s) 786
AsuHPI GGTGA 1 cut(s) 874
AsuNHI GCTAGC 1 cut(s) 551
AvaI CYCGRG 1 cut(s) 168
AvaII GGWCC 1 cut(s) 786
BarI GAAGNNNNNNTAC 4 cut(s) 333, 365, 915, 947
Bbv12I GWGCWC 1 cut(s) 223
BbvI GCAGC 3 cut(s) 52, 278, 855
BccI CCATC 1 cut(s) 383
BceAI ACGGC 1 cut(s) 138
BcgI CGANNNNNNTGC 2 cut(s) 702, 736
BclI TGATCA 1 cut(s) 754
BcoDI GTCTC 1 cut(s) 43
BfaI CTAG 3 cut(s) 230, 321, 552
BisI GCNGC 3 cut(s) 66, 267, 869
BlsI GCNGC 3 cut(s) 67, 268, 870
Bme18I GGWCC 1 cut(s) 786
BmeT110I CYCGRG 1 cut(s) 168
BmgT120I GGNCC 1 cut(s) 786
BmiI GGNNCC 1 cut(s) 787
BmrI ACTGGG 1 cut(s) 948
BmsI GCATC 3 cut(s) 136, 835, 855
BmtI GCTAGC 1 cut(s) 555
BmuI ACTGGG 1 cut(s) 948
BpmI CTGGAG 2 cut(s) 810, 893
Bsc4I CCNNNNNNNGG 1 cut(s) 904
Bse1I ACTGG 5 cut(s) 115, 330, 552, 827, 943
BseGI GGATG 2 cut(s) 326, 660
BseLI CCNNNNNNNGG 1 cut(s) 904
BseMII CTCAG 1 cut(s) 668
BseNI ACTGG 5 cut(s) 115, 330, 552, 827, 943
BseXI GCAGC 3 cut(s) 52, 278, 855
BshFI GGCC 1 cut(s) 577
BsiHKAI GWGCWC 1 cut(s) 223
BsiHKCI CYCGRG 1 cut(s) 168
BslFI GGGAC 1 cut(s) 799
BslI CCNNNNNNNGG 1 cut(s) 904
BsmAI GTCTC 1 cut(s) 43
BsmFI GGGAC 1 cut(s) 799
BsnI GGCC 1 cut(s) 577
BsoBI CYCGRG 1 cut(s) 168
Bsp1286I GDGCHC 1 cut(s) 223
Bsp143I GATC 3 cut(s) 193, 657, 754
BspANI GGCC 1 cut(s) 577
BspCNI CTCAG 1 cut(s) 667
BspLI GGNNCC 1 cut(s) 787
BspOI GCTAGC 1 cut(s) 555
BspQI GCTCTTC 1 cut(s) 887
BsrI ACTGG 5 cut(s) 115, 330, 552, 827, 943
BssMI GATC 3 cut(s) 193, 657, 754
Bst4CI ACNGT 4 cut(s) 37, 430, 668, 775
Bst6I CTCTTC 1 cut(s) 887
BstAPI GCANNNNNTGC 2 cut(s) 17, 272
BstC8I GCNNGC 1 cut(s) 553
BstDEI CTNAG 3 cut(s) 211, 654, 749
BstF5I GGATG 2 cut(s) 326, 660
BstKTI GATC 3 cut(s) 196, 660, 757
BstMAI GTCTC 1 cut(s) 43
BstMBI GATC 3 cut(s) 193, 657, 754
BstMWI GCNNNNNNNGC 4 cut(s) 17, 272, 465, 894
BstV1I GCAGC 3 cut(s) 52, 278, 855
BstXI CCANNNNNNTGG 1 cut(s) 337
BsuRI GGCC 1 cut(s) 577
BtsCI GGATG 2 cut(s) 326, 660
BtsIMutI CAGTG 3 cut(s) 426, 545, 664
Cac8I GCNNGC 1 cut(s) 553
CaiI CAGNNNCTG 2 cut(s) 17, 833
Cfr13I GGNCC 1 cut(s) 786
CspCI CAANNNNNGTGG 2 cut(s) 453, 488
CviAII CATG 1 cut(s) 641
DdeI CTNAG 3 cut(s) 211, 654, 749
DpnI GATC 3 cut(s) 195, 659, 756
DpnII GATC 3 cut(s) 193, 657, 754
Eam1104I CTCTTC 1 cut(s) 887
EarI CTCTTC 1 cut(s) 887
Eco147I AGGCCT 1 cut(s) 577
Eco47I GGWCC 1 cut(s) 786
Eco88I CYCGRG 1 cut(s) 168
EcoRI GAATTC 1 cut(s) 114
FaeI CATG 1 cut(s) 644
FalI AAGNNNNNCTT 2 cut(s) 403, 435
FaqI GGGAC 1 cut(s) 799
FatI CATG 1 cut(s) 640
FbaI TGATCA 1 cut(s) 754
Fnu4HI GCNGC 3 cut(s) 66, 267, 869
FokI GGATG 2 cut(s) 313, 647
Fsp4HI GCNGC 3 cut(s) 66, 267, 869
FspBI CTAG 3 cut(s) 230, 321, 552
GluI GCNGC 3 cut(s) 66, 267, 869
GsuI CTGGAG 2 cut(s) 810, 893
HaeIII GGCC 1 cut(s) 577
Hin1II CATG 1 cut(s) 644
HindIII AAGCTT 1 cut(s) 740
HinfI GANTC 6 cut(s) 157, 173, 441, 594, 701, 766
HphI GGTGA 1 cut(s) 874
Hpy166II GTNNAC 1 cut(s) 945
Hpy188I TCNGA 8 cut(s) 145, 198, 398, 657, 724, 731, 765, 818
Hpy188III TCNNGA 6 cut(s) 93, 168, 170, 481, 618, 695
Hpy8I GTNNAC 1 cut(s) 945
Hpy99I CGWCG 2 cut(s) 28, 46
HpyAV CCTTC 3 cut(s) 95, 236, 408
HpyCH4III ACNGT 4 cut(s) 37, 430, 668, 775
HpyCH4V TGCA 5 cut(s) 68, 266, 803, 836, 888
HpyF10VI GCNNNNNNNGC 4 cut(s) 17, 272, 465, 894
HpyF3I CTNAG 3 cut(s) 211, 654, 749
Hsp92II CATG 1 cut(s) 644
Ksp22I TGATCA 1 cut(s) 754
Kzo9I GATC 3 cut(s) 193, 657, 754
LguI GCTCTTC 1 cut(s) 887
LmnI GCTCC 2 cut(s) 218, 464
Lsp1109I GCAGC 3 cut(s) 52, 278, 855
LweI GCATC 3 cut(s) 136, 835, 855
MaeI CTAG 3 cut(s) 230, 321, 552
MaeIII GTNAC 2 cut(s) 31, 829
MalI GATC 3 cut(s) 195, 659, 756
MboI GATC 3 cut(s) 193, 657, 754
MboII GAAGA 5 cut(s) 90, 413, 423, 904, 935
MfeI CAATTG 1 cut(s) 270
MhlI GDGCHC 1 cut(s) 223
MluCI AATT 3 cut(s) 114, 270, 600
MlyI GAGTC 1 cut(s) 760
MmeI TCCRAC 2 cut(s) 196, 468
MnlI CCTC 5 cut(s) 31, 614, 776, 785, 908
MseI TTAA 2 cut(s) 56, 970
MslI CAYNNNNRTG 1 cut(s) 808
MunI CAATTG 1 cut(s) 270
MwoI GCNNNNNNNGC 4 cut(s) 17, 272, 465, 894
NdeII GATC 3 cut(s) 193, 657, 754
NheI GCTAGC 1 cut(s) 551
NlaIII CATG 1 cut(s) 644
NlaIV GGNNCC 1 cut(s) 787
PaeR7I CTCGAG 1 cut(s) 168
PceI AGGCCT 1 cut(s) 577
PciSI GCTCTTC 1 cut(s) 887
PfeI GAWTC 5 cut(s) 157, 173, 441, 594, 701
PkrI GCNGC 3 cut(s) 67, 268, 870
PleI GAGTC 1 cut(s) 760
PpsI GAGTC 1 cut(s) 760
PspN4I GGNNCC 1 cut(s) 787
PspPI GGNCC 1 cut(s) 786
PstNI CAGNNNCTG 2 cut(s) 17, 833
RseI CAYNNNNRTG 1 cut(s) 808
SapI GCTCTTC 1 cut(s) 887
SaqAI TTAA 2 cut(s) 56, 970
SatI GCNGC 3 cut(s) 66, 267, 869
Sau3AI GATC 3 cut(s) 193, 657, 754
Sau96I GGNCC 1 cut(s) 786
SchI GAGTC 1 cut(s) 760
SduI GDGCHC 1 cut(s) 223
SetI ASST 9 cut(s) 235, 239, 375, 461, 470, 498, 557, 744, 843
SfaNI GCATC 3 cut(s) 136, 835, 855
Sfr274I CTCGAG 1 cut(s) 168
SinI GGWCC 1 cut(s) 786
SlaI CTCGAG 1 cut(s) 168
SmiMI CAYNNNNRTG 1 cut(s) 808
SmlI CTYRAG 1 cut(s) 168
SmoI CTYRAG 1 cut(s) 168
Sse9I AATT 3 cut(s) 114, 270, 600
SseBI AGGCCT 1 cut(s) 577
SspMI CTAG 3 cut(s) 230, 321, 552
StuI AGGCCT 1 cut(s) 577
TaaI ACNGT 4 cut(s) 37, 430, 668, 775
TaqI TCGA 5 cut(s) 23, 94, 169, 696, 900
TasI AATT 3 cut(s) 114, 270, 600
TfiI GAWTC 5 cut(s) 157, 173, 441, 594, 701
Tru1I TTAA 2 cut(s) 56, 970
Tru9I TTAA 2 cut(s) 56, 970
TscAI CASTG 3 cut(s) 433, 552, 671
TseI GCWGC 3 cut(s) 65, 266, 868
TspDTI ATGAA 3 cut(s) 107, 165, 693
TspRI CASTG 3 cut(s) 433, 552, 671
VpaK11BI GGWCC 1 cut(s) 786
XapI RAATTY 1 cut(s) 114
XcmI CCANNNNNNNNNTGG 2 cut(s) 469, 605
XhoI CTCGAG 1 cut(s) 168
XspI CTAG 3 cut(s) 230, 321, 552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.