RLG00000034119

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
N/A
Physical Location & Seq
Reverse (-)
37029973 .. 37034776
4804 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034119

Sequence Viewer

Length: 672 bp
ATGGCGCATGAAATGGCTAATAAGGTTTTAATGCCCATTGCCTGTAAAGTAATGGGTCGAGCCCTTGTCACTCATGTATTTATGCTTGTGTTAACCAAATTTGTTGGTATTGCAGCAGAGGCAAACAACATGGATTATATTTCCCTAAAGATTCTGATGCAAGCGTGGGACATAACCCACCCAGGTTCAGATCCTTGTGCTCATGGCAGGAAAGGCATGGGTTTGAAAGGGCTGCTACCCAGCAATATCCAGTTGTTGTCCAAGCTAGAGACTCTGGATATGAGTAATAATACTTTTGAAGTGTCAGAAGTTCCTGATTGGTTTTCAATCTTGCAGTTCTTGAAGACAATAATGATGGAGAGCACACGGCTTCAGGGACAAGTTTTTCAAGCCCTATTTGGCTTTTACAATTCGCAGACAGTAGAGCTTAAGGAGTGCACCCACAGTTTTTCAGAAGCAAATGATACTGGTTCCGGGGATGATGAAAAGGGAGGGATTGAGTTCAAAGCTGAGGTTGAGCTGCTTTCAAGGGTACTTGTTGGTTTTTGTTTGGAGCAAGATGAACAAATATTGGTATACGAGTATGTTCCAGATGGTAACTTGATGGATAGTCTTTCAGGAAGAGTTGCGCGTGCTCAGGGTCTTCATGATCAGGCTCCATACCGAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

224

Amino Acids

24.83

Weight (kDa)

4.96

Isoelectric Point (pI)

32.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 576
AccII CGCG 1 cut(s) 631
AclWI GGATC 1 cut(s) 185
AcsI RAATTY 1 cut(s) 98
AcuI CTGAAG 1 cut(s) 356
AfaI GTAC 1 cut(s) 534
AflII CTTAAG 1 cut(s) 428
AgsI TTSAA 7 cut(s) 226, 299, 327, 343, 389, 505, 528
AjnI CCWGG 1 cut(s) 181
AluBI AGCT 4 cut(s) 265, 427, 509, 520
AluI AGCT 4 cut(s) 265, 427, 509, 520
Alw21I GWGCWC 4 cut(s) 202, 365, 440, 637
Alw26I GTCTC 1 cut(s) 263
Alw44I GTGCAC 1 cut(s) 436
AlwI GGATC 1 cut(s) 185
ApaLI GTGCAC 1 cut(s) 436
ApeKI GCWGC 3 cut(s) 113, 232, 520
ApoI RAATTY 1 cut(s) 98
AspLEI GCGC 2 cut(s) 7, 631
AsuC2I CCSGG 1 cut(s) 475
BaeGI GKGCMC 1 cut(s) 440
BanII GRGCYC 1 cut(s) 64
BbsI GAAGAC 2 cut(s) 350, 635
Bbv12I GWGCWC 4 cut(s) 202, 365, 440, 637
BbvCI CCTCAGC 1 cut(s) 510
BbvI GCAGC 3 cut(s) 125, 219, 507
BccI CCATC 3 cut(s) 349, 587, 598
BceAI ACGGC 1 cut(s) 383
BciT130I CCWGG 1 cut(s) 183
BclI TGATCA 1 cut(s) 649
BcnI CCSGG 1 cut(s) 475
BcoDI GTCTC 1 cut(s) 263
BfaI CTAG 1 cut(s) 266
BfrI CTTAAG 1 cut(s) 428
BisI GCNGC 3 cut(s) 114, 233, 521
BlsI GCNGC 3 cut(s) 115, 234, 522
Bme1390I CCNGG 2 cut(s) 183, 475
BmiI GGNNCC 2 cut(s) 472, 657
BmrFI CCNGG 2 cut(s) 183, 475
BmsI GCATC 1 cut(s) 147
BpiI GAAGAC 2 cut(s) 350, 635
Bpu10I CCTNAGC 2 cut(s) 510, 636
BpuMI CCSGG 1 cut(s) 475
BsaJI CCNNGG 2 cut(s) 181, 474
Bse1I ACTGG 2 cut(s) 250, 472
Bse3DI GCAATG 1 cut(s) 36
BseBI CCWGG 1 cut(s) 183
BseDI CCNNGG 2 cut(s) 181, 474
BseGI GGATG 1 cut(s) 484
BseMI GCAATG 1 cut(s) 36
BseMII CTCAG 2 cut(s) 501, 650
BseNI ACTGG 2 cut(s) 250, 472
BseSI GKGCMC 1 cut(s) 440
BseXI GCAGC 3 cut(s) 125, 219, 507
BseYI CCCAGC 1 cut(s) 239
Bsh1236I CGCG 1 cut(s) 631
BsiHKAI GWGCWC 4 cut(s) 202, 365, 440, 637
BsiSI CCGG 1 cut(s) 474
BslFI GGGAC 2 cut(s) 182, 390
BsmAI GTCTC 1 cut(s) 263
BsmFI GGGAC 2 cut(s) 182, 390
Bsp1286I GDGCHC 5 cut(s) 64, 202, 365, 440, 637
Bsp143I GATC 2 cut(s) 190, 649
BspCNI CTCAG 2 cut(s) 502, 649
BspFNI CGCG 1 cut(s) 631
BspHI TCATGA 1 cut(s) 646
BspLI GGNNCC 2 cut(s) 472, 657
BspPI GGATC 1 cut(s) 185
BspTI CTTAAG 1 cut(s) 428
BsrDI GCAATG 1 cut(s) 36
BsrI ACTGG 2 cut(s) 250, 472
BssECI CCNNGG 2 cut(s) 181, 474
BssMI GATC 2 cut(s) 190, 649
BssNAI GTATAC 1 cut(s) 577
Bst1107I GTATAC 1 cut(s) 577
Bst2UI CCWGG 1 cut(s) 183
Bst4CI ACNGT 2 cut(s) 421, 446
Bst6I CTCTTC 1 cut(s) 616
BstAFI CTTAAG 1 cut(s) 428
BstC8I GCNNGC 2 cut(s) 162, 633
BstDEI CTNAG 2 cut(s) 510, 636
BstF5I GGATG 1 cut(s) 484
BstFNI CGCG 1 cut(s) 631
BstHHI GCGC 2 cut(s) 7, 631
BstKTI GATC 2 cut(s) 193, 652
BstMAI GTCTC 1 cut(s) 263
BstMBI GATC 2 cut(s) 190, 649
BstMWI GCNNNNNNNGC 2 cut(s) 119, 213
BstNI CCWGG 1 cut(s) 183
BstSCI CCNGG 2 cut(s) 181, 473
BstSLI GKGCMC 1 cut(s) 440
BstUI CGCG 1 cut(s) 631
BstV1I GCAGC 3 cut(s) 125, 219, 507
BstV2I GAAGAC 2 cut(s) 350, 635
BstX2I RGATCY 1 cut(s) 190
BstYI RGATCY 1 cut(s) 190
BstZ17I GTATAC 1 cut(s) 577
BtsCI GGATG 1 cut(s) 484
Cac8I GCNNGC 2 cut(s) 162, 633
CciI TCATGA 1 cut(s) 646
CfoI GCGC 2 cut(s) 7, 631
Csp6I GTAC 1 cut(s) 533
CviAII CATG 6 cut(s) 8, 74, 130, 203, 217, 647
CviQI GTAC 1 cut(s) 533
DdeI CTNAG 2 cut(s) 510, 636
DpnI GATC 2 cut(s) 192, 651
DpnII GATC 2 cut(s) 190, 649
Eam1104I CTCTTC 1 cut(s) 616
EarI CTCTTC 1 cut(s) 616
Eco24I GRGCYC 1 cut(s) 64
Eco57I CTGAAG 1 cut(s) 356
EcoRII CCWGG 1 cut(s) 181
EcoT38I GRGCYC 1 cut(s) 64
FaeI CATG 6 cut(s) 11, 77, 133, 206, 220, 650
FaqI GGGAC 2 cut(s) 182, 390
FatI CATG 6 cut(s) 7, 73, 129, 202, 216, 646
FbaI TGATCA 1 cut(s) 649
FblI GTMKAC 1 cut(s) 576
Fnu4HI GCNGC 3 cut(s) 114, 233, 521
FokI GGATG 1 cut(s) 491
FriOI GRGCYC 1 cut(s) 64
Fsp4HI GCNGC 3 cut(s) 114, 233, 521
FspBI CTAG 1 cut(s) 266
GlaI GCGC 2 cut(s) 6, 630
GluI GCNGC 3 cut(s) 114, 233, 521
GsaI CCCAGC 1 cut(s) 243
HapII CCGG 1 cut(s) 474
HhaI GCGC 2 cut(s) 7, 631
Hin1II CATG 6 cut(s) 11, 77, 133, 206, 220, 650
Hin6I GCGC 2 cut(s) 5, 629
HinP1I GCGC 2 cut(s) 5, 629
HincII GTYRAC 1 cut(s) 93
HindII GTYRAC 1 cut(s) 93
HinfI GANTC 2 cut(s) 151, 271
HpaI GTTAAC 1 cut(s) 93
HpaII CCGG 1 cut(s) 474
Hpy166II GTNNAC 3 cut(s) 93, 438, 577
Hpy188I TCNGA 4 cut(s) 156, 190, 307, 454
Hpy188III TCNNGA 6 cut(s) 275, 314, 340, 590, 618, 647
Hpy8I GTNNAC 3 cut(s) 93, 438, 577
HpyCH4III ACNGT 2 cut(s) 421, 446
HpyCH4V TGCA 4 cut(s) 113, 160, 334, 438
HpyF10VI GCNNNNNNNGC 2 cut(s) 119, 213
HpyF3I CTNAG 2 cut(s) 510, 636
Hsp92II CATG 6 cut(s) 11, 77, 133, 206, 220, 650
HspAI GCGC 2 cut(s) 5, 629
Ksp22I TGATCA 1 cut(s) 649
KspAI GTTAAC 1 cut(s) 93
Kzo9I GATC 2 cut(s) 190, 649
LmnI GCTCC 2 cut(s) 553, 661
Lsp1109I GCAGC 3 cut(s) 125, 219, 507
LweI GCATC 1 cut(s) 147
MaeI CTAG 1 cut(s) 266
MaeIII GTNAC 2 cut(s) 67, 596
MalI GATC 2 cut(s) 192, 651
MboI GATC 2 cut(s) 190, 649
MboII GAAGA 3 cut(s) 355, 633, 635
MflI RGATCY 1 cut(s) 190
MhlI GDGCHC 5 cut(s) 64, 202, 365, 440, 637
MluCI AATT 2 cut(s) 98, 409
MlyI GAGTC 1 cut(s) 265
MnlI CCTC 3 cut(s) 112, 485, 505
MseI TTAA 3 cut(s) 29, 92, 429
MspCI CTTAAG 1 cut(s) 428
MspI CCGG 1 cut(s) 474
MspR9I CCNGG 2 cut(s) 183, 475
MvaI CCWGG 1 cut(s) 183
MvnI CGCG 1 cut(s) 631
MwoI GCNNNNNNNGC 2 cut(s) 119, 213
NciI CCSGG 1 cut(s) 475
NdeII GATC 2 cut(s) 190, 649
NlaIII CATG 6 cut(s) 11, 77, 133, 206, 220, 650
NlaIV GGNNCC 2 cut(s) 472, 657
NmuCI GTSAC 1 cut(s) 67
PagI TCATGA 1 cut(s) 646
PfeI GAWTC 1 cut(s) 151
PkrI GCNGC 3 cut(s) 115, 234, 522
PleI GAGTC 1 cut(s) 265
PpsI GAGTC 1 cut(s) 265
Psp6I CCWGG 1 cut(s) 181
PspFI CCCAGC 1 cut(s) 239
PspGI CCWGG 1 cut(s) 181
PspN4I GGNNCC 2 cut(s) 472, 657
PsuI RGATCY 1 cut(s) 190
RsaI GTAC 1 cut(s) 534
RsaNI GTAC 1 cut(s) 533
SaqAI TTAA 3 cut(s) 29, 92, 429
SatI GCNGC 3 cut(s) 114, 233, 521
Sau3AI GATC 2 cut(s) 190, 649
SchI GAGTC 1 cut(s) 265
ScrFI CCNGG 2 cut(s) 183, 475
SduI GDGCHC 5 cut(s) 64, 202, 365, 440, 637
SetI ASST 7 cut(s) 27, 187, 267, 429, 511, 516, 522
SfaNI GCATC 1 cut(s) 147
SmlI CTYRAG 1 cut(s) 428
SmoI CTYRAG 1 cut(s) 428
Sse9I AATT 2 cut(s) 98, 409
SspI AATATT 1 cut(s) 570
SspMI CTAG 1 cut(s) 266
StyD4I CCNGG 2 cut(s) 181, 473
TaaI ACNGT 2 cut(s) 421, 446
TaqI TCGA 1 cut(s) 58
TasI AATT 2 cut(s) 98, 409
TfiI GAWTC 1 cut(s) 151
Tru1I TTAA 3 cut(s) 29, 92, 429
Tru9I TTAA 3 cut(s) 29, 92, 429
TseFI GTSAC 1 cut(s) 67
TseI GCWGC 3 cut(s) 113, 232, 520
Tsp45I GTSAC 1 cut(s) 67
TspDTI ATGAA 4 cut(s) 24, 498, 576, 635
Vha464I CTTAAG 1 cut(s) 428
VneI GTGCAC 1 cut(s) 436
XapI RAATTY 1 cut(s) 98
XmiI GTMKAC 1 cut(s) 576
XspI CTAG 1 cut(s) 266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.