RLG00000035692
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
N/A
Physical Location & Seq
Reverse (-)
70318247 .. 70319295
1049 bp
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UTR
Exon/CDS
Intron
RLM00000035692

Sequence Viewer

Length: 960 bp
ATGGTGAATCATTTTGCCCAAGAATTCAAGAGGAAGAACAATAAGGACCTTAGCAATAATCTTAGTGCATTGAGGAGATTGAGGACATCTTGTGAGAGAGCAAAGAGGACACTCTCTTCGATTGCTCAAACCACAATTGTTATTGATTCTTTATTCGAGGATATTGACTTTTACACCGAAATAACCAGAGCAGAATTTGAGGAGCTCAATATGGATCTCTTCAAAACATGTTTGGAGCCTGTGAAGAAGTGTTTGTCAGATGCTAAAATGGACAAGATGGTTGTTCTTATCAGTGGTTCTACTAGAATTCCAGAGGTACAACAGCTATTGCAGAACTTTTTTAACGGTAGGGAACTTTGCAAGAGCATCAATCCTGATGAAGTAGTTGCATATGGGGCCGCCGTGCAGTCTGCAATCTTGGACGGTGAGGTTGAGAAGGTCAATAACTTGCTGTTGTGGATGTCACTCCACTTTCCCTCGGTGTGGAGACAAGGTGTGACTGTTAATGTGTATGAGGGCGAAAGAACAAAAGTCCAAGAAAACATGTTGTTGGGTACGTTTGAGCTTTCAGGCTTCCATCCTGCTCCTAGGGGTGTACCTCAGATTAATGTTAGCTTTACGATTGAGGTCAATGGAATTTTAAATGTCTCTGCCGAGGAAAAGCAATCAAGTAAGAAGAATAACATCACAATCAAACATAACAAGGGTGCGCTATCTAAGCACGAAATCCAGGAGATGATAAGGGAGGCAGAGAAGTTCAAGTTAGAGGACAAGAAATATAATGAGAAAGTAGAGGCTAAGGTTGCATTGGAAATTTATGCAAATGATATGAAGAACATAGTTTCTGAGCCCTCAAAAGAGTCAAAGCTCAATGGAAAGGCGAAGAAGAGAATCTTAACTGCGGTTGAAAATGTCATTTGGTGGCTTGAGGTGAACCAAGATGCTGAATGTGATGAATAA
Functional Annotation

Protein Analysis

320

Amino Acids

36.39

Weight (kDa)

6.09

Isoelectric Point (pI)

47.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 1 - 152 3e-47 Hsp70 protein
HSP70 PF00012 163 - 313 6e-35 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 399, 902
AclWI GGATC 1 cut(s) 222
AcsI RAATTY 5 cut(s) 23, 194, 306, 636, 813
AfaI GTAC 3 cut(s) 318, 556, 597
AfiI CCNNNNNNNGG 1 cut(s) 483
AflIII ACRYGT 2 cut(s) 227, 543
AgsI TTSAA 4 cut(s) 28, 223, 760, 908
AjnI CCWGG 1 cut(s) 729
AluBI AGCT 5 cut(s) 205, 325, 565, 615, 868
AluI AGCT 5 cut(s) 205, 325, 565, 615, 868
Alw21I GWGCWC 1 cut(s) 207
Alw26I GTCTC 2 cut(s) 481, 652
AlwI GGATC 1 cut(s) 222
AoxI GGCC 1 cut(s) 396
ApoI RAATTY 5 cut(s) 23, 194, 306, 636, 813
ArsI GACNNNNNNTTYG 2 cut(s) 100, 132
AseI ATTAAT 1 cut(s) 606
AspA2I CCTAGG 1 cut(s) 587
AspLEI GCGC 1 cut(s) 712
AspS9I GGNCC 2 cut(s) 46, 396
AsuHPI GGTGA 3 cut(s) 16, 437, 943
AvaII GGWCC 1 cut(s) 46
AvrII CCTAGG 1 cut(s) 587
BanII GRGCYC 2 cut(s) 207, 852
Bbv12I GWGCWC 1 cut(s) 207
BccI CCATC 2 cut(s) 271, 585
BceAI ACGGC 1 cut(s) 386
BciT130I CCWGG 1 cut(s) 731
BcoDI GTCTC 2 cut(s) 481, 652
BfaI CTAG 2 cut(s) 303, 588
BisI GCNGC 1 cut(s) 399
BlnI CCTAGG 1 cut(s) 587
BlsI GCNGC 1 cut(s) 400
Bme1390I CCNGG 1 cut(s) 731
Bme18I GGWCC 1 cut(s) 46
BmgT120I GGNCC 2 cut(s) 46, 396
BmiI GGNNCC 2 cut(s) 237, 397
BmrFI CCNGG 1 cut(s) 731
BmsI GCATC 3 cut(s) 250, 375, 931
Bpu10I CCTNAGC 2 cut(s) 50, 798
BpuEI CTTGAG 1 cut(s) 947
BsaJI CCNNGG 3 cut(s) 477, 587, 654
BsaXI ACNNNNNCTCC 2 cut(s) 478, 508
Bsc4I CCNNNNNNNGG 1 cut(s) 483
BseBI CCWGG 1 cut(s) 731
BseDI CCNNGG 3 cut(s) 477, 587, 654
BseGI GGATG 2 cut(s) 465, 577
BseLI CCNNNNNNNGG 1 cut(s) 483
BseMII CTCAG 2 cut(s) 614, 837
BseRI GAGGAG 2 cut(s) 88, 215
BsgI GTGCAG 1 cut(s) 425
BshFI GGCC 1 cut(s) 398
BsiHKAI GWGCWC 1 cut(s) 207
BslI CCNNNNNNNGG 1 cut(s) 483
BsmAI GTCTC 2 cut(s) 481, 652
BsnI GGCC 1 cut(s) 398
Bsp1286I GDGCHC 2 cut(s) 207, 852
Bsp143I GATC 1 cut(s) 214
BspACI CCGC 2 cut(s) 399, 902
BspANI GGCC 1 cut(s) 398
BspCNI CTCAG 2 cut(s) 613, 838
BspLI GGNNCC 2 cut(s) 237, 397
BspPI GGATC 1 cut(s) 222
BssECI CCNNGG 3 cut(s) 477, 587, 654
BssMI GATC 1 cut(s) 214
BssT1I CCWWGG 1 cut(s) 587
Bst2UI CCWGG 1 cut(s) 731
Bst4CI ACNGT 3 cut(s) 347, 425, 502
Bst6I CTCTTC 3 cut(s) 121, 224, 881
BstDEI CTNAG 6 cut(s) 50, 62, 600, 717, 798, 846
BstF5I GGATG 2 cut(s) 465, 577
BstHHI GCGC 1 cut(s) 712
BstKTI GATC 1 cut(s) 217
BstMAI GTCTC 2 cut(s) 481, 652
BstMBI GATC 1 cut(s) 214
BstMWI GCNNNNNNNGC 3 cut(s) 395, 718, 803
BstNI CCWGG 1 cut(s) 731
BstNSI RCATGY 2 cut(s) 231, 547
BstSCI CCNGG 1 cut(s) 729
BstX2I RGATCY 1 cut(s) 214
BstYI RGATCY 1 cut(s) 214
BsuRI GGCC 1 cut(s) 398
BtsCI GGATG 2 cut(s) 465, 577
BtsIMutI CAGTG 1 cut(s) 298
CfoI GCGC 1 cut(s) 712
Cfr13I GGNCC 2 cut(s) 46, 396
Csp6I GTAC 3 cut(s) 317, 555, 596
CviAII CATG 2 cut(s) 228, 544
CviQI GTAC 3 cut(s) 317, 555, 596
DdeI CTNAG 6 cut(s) 50, 62, 600, 717, 798, 846
DpnI GATC 1 cut(s) 216
DpnII GATC 1 cut(s) 214
DraI TTTAAA 1 cut(s) 642
Eam1104I CTCTTC 3 cut(s) 121, 224, 881
EarI CTCTTC 3 cut(s) 121, 224, 881
Ecl136II GAGCTC 1 cut(s) 205
Eco130I CCWWGG 1 cut(s) 587
Eco24I GRGCYC 2 cut(s) 207, 852
Eco47I GGWCC 1 cut(s) 46
Eco53kI GAGCTC 1 cut(s) 205
EcoICRI GAGCTC 1 cut(s) 205
EcoO109I RGGNCCY 1 cut(s) 46
EcoRI GAATTC 2 cut(s) 23, 306
EcoRII CCWGG 1 cut(s) 729
EcoT14I CCWWGG 1 cut(s) 587
EcoT38I GRGCYC 2 cut(s) 207, 852
ErhI CCWWGG 1 cut(s) 587
FaeI CATG 2 cut(s) 231, 547
FalI AAGNNNNNCTT 2 cut(s) 878, 910
FatI CATG 2 cut(s) 227, 543
FauNDI CATATG 1 cut(s) 391
Fnu4HI GCNGC 1 cut(s) 399
FokI GGATG 2 cut(s) 472, 564
FriOI GRGCYC 2 cut(s) 207, 852
Fsp4HI GCNGC 1 cut(s) 399
FspBI CTAG 2 cut(s) 303, 588
GlaI GCGC 1 cut(s) 711
GluI GCNGC 1 cut(s) 399
HaeIII GGCC 1 cut(s) 398
HhaI GCGC 1 cut(s) 712
Hin1II CATG 2 cut(s) 231, 547
Hin6I GCGC 1 cut(s) 710
HinP1I GCGC 1 cut(s) 710
HinfI GANTC 4 cut(s) 7, 146, 860, 891
HphI GGTGA 3 cut(s) 16, 437, 943
Hpy166II GTNNAC 2 cut(s) 596, 934
Hpy188I TCNGA 3 cut(s) 259, 603, 847
Hpy188III TCNNGA 3 cut(s) 28, 311, 374
Hpy8I GTNNAC 2 cut(s) 596, 934
HpyAV CCTTC 1 cut(s) 430
HpyCH4III ACNGT 3 cut(s) 347, 425, 502
HpyCH4IV ACGT 1 cut(s) 557
HpyCH4V TGCA 8 cut(s) 68, 331, 360, 389, 406, 413, 806, 821
HpyF10VI GCNNNNNNNGC 3 cut(s) 395, 718, 803
HpyF3I CTNAG 6 cut(s) 50, 62, 600, 717, 798, 846
HpySE526I ACGT 1 cut(s) 557
Hsp92II CATG 2 cut(s) 231, 547
HspAI GCGC 1 cut(s) 710
Kzo9I GATC 1 cut(s) 214
LmnI GCTCC 3 cut(s) 202, 235, 589
LpnPI CCDG 8 cut(s) 199, 252, 324, 387, 555, 594, 716, 743
LweI GCATC 3 cut(s) 250, 375, 931
MaeI CTAG 2 cut(s) 303, 588
MaeII ACGT 1 cut(s) 557
MaeIII GTNAC 2 cut(s) 462, 496
MalI GATC 1 cut(s) 216
MboI GATC 1 cut(s) 214
MboII GAAGA 8 cut(s) 46, 108, 211, 256, 688, 844, 895, 898
MfeI CAATTG 1 cut(s) 135
MflI RGATCY 1 cut(s) 214
MhlI GDGCHC 2 cut(s) 207, 852
MluCI AATT 6 cut(s) 23, 135, 194, 306, 636, 813
MlyI GAGTC 1 cut(s) 869
MseI TTAA 5 cut(s) 342, 504, 606, 641, 896
MspR9I CCNGG 1 cut(s) 731
MunI CAATTG 1 cut(s) 135
MvaI CCWGG 1 cut(s) 731
MwoI GCNNNNNNNGC 3 cut(s) 395, 718, 803
NdeI CATATG 1 cut(s) 391
NdeII GATC 1 cut(s) 214
NlaIII CATG 2 cut(s) 231, 547
NlaIV GGNNCC 2 cut(s) 237, 397
NmeAIII GCCGAG 1 cut(s) 679
NmuCI GTSAC 2 cut(s) 462, 496
NspI RCATGY 2 cut(s) 231, 547
PciI ACATGT 2 cut(s) 227, 543
PfeI GAWTC 3 cut(s) 7, 146, 891
PfoI TCCNGGA 1 cut(s) 729
PkrI GCNGC 1 cut(s) 400
PleI GAGTC 1 cut(s) 868
PpsI GAGTC 1 cut(s) 868
PpuMI RGGWCCY 1 cut(s) 46
PscI ACATGT 2 cut(s) 227, 543
PshBI ATTAAT 1 cut(s) 606
Psp124BI GAGCTC 1 cut(s) 207
Psp5II RGGWCCY 1 cut(s) 46
Psp6I CCWGG 1 cut(s) 729
PspGI CCWGG 1 cut(s) 729
PspN4I GGNNCC 2 cut(s) 237, 397
PspPI GGNCC 2 cut(s) 46, 396
PspPPI RGGWCCY 1 cut(s) 46
PsuI RGATCY 1 cut(s) 214
RsaI GTAC 3 cut(s) 318, 556, 597
RsaNI GTAC 3 cut(s) 317, 555, 596
SacI GAGCTC 1 cut(s) 207
SaqAI TTAA 5 cut(s) 342, 504, 606, 641, 896
SatI GCNGC 1 cut(s) 399
Sau3AI GATC 1 cut(s) 214
Sau96I GGNCC 2 cut(s) 46, 396
SchI GAGTC 1 cut(s) 869
ScrFI CCNGG 1 cut(s) 731
SduI GDGCHC 2 cut(s) 207, 852
SfaNI GCATC 3 cut(s) 250, 375, 931
SinI GGWCC 1 cut(s) 46
SmlI CTYRAG 1 cut(s) 926
SmoI CTYRAG 1 cut(s) 926
Sse9I AATT 6 cut(s) 23, 135, 194, 306, 636, 813
SsiI CCGC 2 cut(s) 399, 902
SspMI CTAG 2 cut(s) 303, 588
SstI GAGCTC 1 cut(s) 207
StyD4I CCNGG 1 cut(s) 729
StyI CCWWGG 1 cut(s) 587
TaaI ACNGT 3 cut(s) 347, 425, 502
TaiI ACGT 1 cut(s) 560
TaqI TCGA 2 cut(s) 119, 156
TasI AATT 6 cut(s) 23, 135, 194, 306, 636, 813
TauI GCSGC 1 cut(s) 401
TfiI GAWTC 3 cut(s) 7, 146, 891
Tru1I TTAA 5 cut(s) 342, 504, 606, 641, 896
Tru9I TTAA 5 cut(s) 342, 504, 606, 641, 896
TscAI CASTG 1 cut(s) 298
TseFI GTSAC 2 cut(s) 462, 496
Tsp45I GTSAC 2 cut(s) 462, 496
TspDTI ATGAA 2 cut(s) 393, 845
TspRI CASTG 1 cut(s) 298
VpaK11BI GGWCC 1 cut(s) 46
VspI ATTAAT 1 cut(s) 606
XapI RAATTY 5 cut(s) 23, 194, 306, 636, 813
XceI RCATGY 2 cut(s) 231, 547
XmaJI CCTAGG 1 cut(s) 587
XspI CTAG 2 cut(s) 303, 588
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.