Rmu_co7958997.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co7958997.1
N/A
Physical Location & Seq
Reverse (-)
1 .. 447
447 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co7958997.1_g000001.1.cds

Sequence Viewer

Length: 354 bp
atgggaattgcacgaggacttctctacctccatcaagactcaagattaagaatcattcatagggaccttaagagtagcaacatcttgctagaccgtgacctgatcccaaaaatatccgactttggcatagcaagaattttcgaacacgatcaaactgaaggaaaaacaaaacgagtaattggcacatatggatatatgtctcctgagtacacaattcatgggaaattttcagtgaaatcggatgtgttcagttttggagtgctattattagagatagttagcagcagaaagaacacagggttcaatcatccagatcacaaccacaatcttctgggacatgtaagttattttatg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

118

Amino Acids

13.54

Weight (kDa)

9.3

Isoelectric Point (pI)

37.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 97
AcsI RAATTY 2 cut(s) 135, 224
AcuI CTGAAG 1 cut(s) 177
AfaI GTAC 1 cut(s) 209
AflII CTTAAG 1 cut(s) 68
AflIII ACRYGT 1 cut(s) 337
AgsI TTSAA 1 cut(s) 304
Alw26I GTCTC 1 cut(s) 204
AlwI GGATC 1 cut(s) 97
ApeKI GCWGC 1 cut(s) 282
ApoI RAATTY 2 cut(s) 135, 224
AspS9I GGNCC 1 cut(s) 64
AsuII TTCGAA 1 cut(s) 141
AvaII GGWCC 1 cut(s) 64
BauI CACGAG 1 cut(s) 12
BbvI GCAGC 1 cut(s) 294
BccI CCATC 1 cut(s) 39
BcoDI GTCTC 1 cut(s) 204
BfaI CTAG 1 cut(s) 89
BfrI CTTAAG 1 cut(s) 68
BisI GCNGC 1 cut(s) 283
BlsI GCNGC 1 cut(s) 284
Bme18I GGWCC 1 cut(s) 64
BmgT120I GGNCC 1 cut(s) 64
BmiI GGNNCC 1 cut(s) 65
BplI GAGNNNNNCTC 1 cut(s) 38
Bpu14I TTCGAA 1 cut(s) 141
BpuEI CTTGAG 1 cut(s) 25
BseGI GGATG 2 cut(s) 247, 307
BseMII CTCAG 1 cut(s) 195
BseXI GCAGC 1 cut(s) 294
BslFI GGGAC 2 cut(s) 77, 348
BsmAI GTCTC 1 cut(s) 204
BsmFI GGGAC 2 cut(s) 77, 348
Bsp119I TTCGAA 1 cut(s) 141
Bsp143I GATC 3 cut(s) 102, 148, 313
BspCNI CTCAG 1 cut(s) 196
BspLI GGNNCC 1 cut(s) 65
BspPI GGATC 1 cut(s) 97
BspT104I TTCGAA 1 cut(s) 141
BspTI CTTAAG 1 cut(s) 68
BssMI GATC 3 cut(s) 102, 148, 313
BssSI CACGAG 1 cut(s) 12
Bst2BI CACGAG 1 cut(s) 12
Bst4CI ACNGT 1 cut(s) 95
BstAFI CTTAAG 1 cut(s) 68
BstBI TTCGAA 1 cut(s) 141
BstDEI CTNAG 1 cut(s) 204
BstF5I GGATG 2 cut(s) 247, 307
BstKTI GATC 3 cut(s) 105, 151, 316
BstMAI GTCTC 1 cut(s) 204
BstMBI GATC 3 cut(s) 102, 148, 313
BstNSI RCATGY 1 cut(s) 341
BstV1I GCAGC 1 cut(s) 294
BtsCI GGATG 2 cut(s) 247, 307
BtsIMutI CAGTG 1 cut(s) 237
Cfr13I GGNCC 1 cut(s) 64
Csp6I GTAC 1 cut(s) 208
CviAII CATG 2 cut(s) 218, 338
CviQI GTAC 1 cut(s) 208
DdeI CTNAG 1 cut(s) 204
DpnI GATC 3 cut(s) 104, 150, 315
DpnII GATC 3 cut(s) 102, 148, 313
Eco47I GGWCC 1 cut(s) 64
Eco57I CTGAAG 1 cut(s) 177
EcoO109I RGGNCCY 1 cut(s) 64
FaeI CATG 2 cut(s) 221, 341
FaiI YATR 9 cut(s) 60, 128, 187, 189, 195, 197, 219, 339, 353
FaqI GGGAC 2 cut(s) 77, 348
FatI CATG 2 cut(s) 217, 337
FauNDI CATATG 1 cut(s) 187
Fnu4HI GCNGC 1 cut(s) 283
FokI GGATG 2 cut(s) 254, 294
Fsp4HI GCNGC 1 cut(s) 283
FspBI CTAG 1 cut(s) 89
GluI GCNGC 1 cut(s) 283
Hin1II CATG 2 cut(s) 221, 341
HinfI GANTC 2 cut(s) 38, 51
Hpy166II GTNNAC 1 cut(s) 210
Hpy188I TCNGA 2 cut(s) 118, 241
Hpy188III TCNNGA 4 cut(s) 35, 42, 203, 311
Hpy8I GTNNAC 1 cut(s) 210
HpyAV CCTTC 1 cut(s) 152
HpyCH4III ACNGT 1 cut(s) 95
HpyCH4V TGCA 1 cut(s) 11
HpyF3I CTNAG 1 cut(s) 204
Hsp92II CATG 2 cut(s) 221, 341
Kzo9I GATC 3 cut(s) 102, 148, 313
LpnPI CCDG 5 cut(s) 113, 216, 282, 317, 324
Lsp1109I GCAGC 1 cut(s) 294
MaeI CTAG 1 cut(s) 89
MaeIII GTNAC 1 cut(s) 95
MalI GATC 3 cut(s) 104, 150, 315
MboI GATC 3 cut(s) 102, 148, 313
MboII GAAGA 1 cut(s) 320
MluCI AATT 5 cut(s) 6, 135, 177, 213, 224
MlyI GAGTC 1 cut(s) 32
MmeI TCCRAC 1 cut(s) 141
MnlI CCTC 2 cut(s) 8, 38
MseI TTAA 2 cut(s) 47, 69
MspCI CTTAAG 1 cut(s) 68
NdeI CATATG 1 cut(s) 187
NdeII GATC 3 cut(s) 102, 148, 313
NlaIII CATG 2 cut(s) 221, 341
NlaIV GGNNCC 1 cut(s) 65
NmuCI GTSAC 1 cut(s) 95
NspI RCATGY 1 cut(s) 341
NspV TTCGAA 1 cut(s) 141
PciI ACATGT 1 cut(s) 337
PfeI GAWTC 1 cut(s) 51
PkrI GCNGC 1 cut(s) 284
PleI GAGTC 1 cut(s) 32
PpsI GAGTC 1 cut(s) 32
PpuMI RGGWCCY 1 cut(s) 64
PscI ACATGT 1 cut(s) 337
Psp5II RGGWCCY 1 cut(s) 64
PspN4I GGNNCC 1 cut(s) 65
PspPI GGNCC 1 cut(s) 64
PspPPI RGGWCCY 1 cut(s) 64
RsaI GTAC 1 cut(s) 209
RsaNI GTAC 1 cut(s) 208
SaqAI TTAA 2 cut(s) 47, 69
SatI GCNGC 1 cut(s) 283
Sau3AI GATC 3 cut(s) 102, 148, 313
Sau96I GGNCC 1 cut(s) 64
SchI GAGTC 1 cut(s) 32
SetI ASST 3 cut(s) 30, 69, 102
SfuI TTCGAA 1 cut(s) 141
SinI GGWCC 1 cut(s) 64
SmlI CTYRAG 2 cut(s) 40, 68
SmoI CTYRAG 2 cut(s) 40, 68
Sse9I AATT 5 cut(s) 6, 135, 177, 213, 224
SspMI CTAG 1 cut(s) 89
TaaI ACNGT 1 cut(s) 95
TaqI TCGA 1 cut(s) 141
TasI AATT 5 cut(s) 6, 135, 177, 213, 224
TatI WGTACW 1 cut(s) 207
TfiI GAWTC 1 cut(s) 51
Tru1I TTAA 2 cut(s) 47, 69
Tru9I TTAA 2 cut(s) 47, 69
TscAI CASTG 1 cut(s) 237
TseFI GTSAC 1 cut(s) 95
TseI GCWGC 1 cut(s) 282
Tsp45I GTSAC 1 cut(s) 95
TspDTI ATGAA 2 cut(s) 47, 206
TspRI CASTG 1 cut(s) 237
Vha464I CTTAAG 1 cut(s) 68
VpaK11BI GGWCC 1 cut(s) 64
XapI RAATTY 2 cut(s) 135, 224
XceI RCATGY 1 cut(s) 341
XspI CTAG 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.