Rmu_co7990710.1_g000001

Serine/threonine phosphatases, family 2C, catalytic domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co7990710.1
N/A
Physical Location & Seq
Reverse (-)
2 .. 346
345 bp
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UTR
Exon/CDS
Intron
Rmu_co7990710.1_g000001.1.cds

Sequence Viewer

Length: 241 bp
atgaaggaagcatcttggaaaaatcttgtatctggtactacagcctcgattatattacttgctgatggtcatattttagttgccaatattggagactcaaaggcttttctgtgctcagaaaaatttcagtctcctgcagaggctaaagccgcttatttgagatacaggcgggaaaggcgtaatggtgccatatcatctcccttaggaaactataagaaaaactttgaattggcttcctcct

Protein Analysis

80

Amino Acids

8.76

Weight (kDa)

9.66

Isoelectric Point (pI)

61.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 185
AciI CCGC 2 cut(s) 150, 169
AcsI RAATTY 1 cut(s) 122
AfaI GTAC 1 cut(s) 37
AgsI TTSAA 1 cut(s) 227
Alw21I GWGCWC 1 cut(s) 116
Alw26I GTCTC 2 cut(s) 87, 135
ApoI RAATTY 1 cut(s) 122
Asp700I GAANNNNTTC 1 cut(s) 123
AxyI CCTNAGG 1 cut(s) 202
BanI GGYRCC 1 cut(s) 185
Bbv12I GWGCWC 1 cut(s) 116
BccI CCATC 1 cut(s) 59
BcoDI GTCTC 2 cut(s) 87, 135
BfmI CTRYAG 2 cut(s) 39, 135
BisI GCNGC 1 cut(s) 150
BlsI GCNGC 1 cut(s) 151
BmiI GGNNCC 1 cut(s) 187
BmsI GCATC 1 cut(s) 20
Bse21I CCTNAGG 1 cut(s) 202
BseMII CTCAG 1 cut(s) 129
BshNI GGYRCC 1 cut(s) 185
BsiHKAI GWGCWC 1 cut(s) 116
BsmAI GTCTC 2 cut(s) 87, 135
Bsp1286I GDGCHC 1 cut(s) 116
BspACI CCGC 2 cut(s) 150, 169
BspCNI CTCAG 1 cut(s) 128
BspLI GGNNCC 1 cut(s) 187
BspMAI CTGCAG 1 cut(s) 139
BspT107I GGYRCC 1 cut(s) 185
BstDEI CTNAG 2 cut(s) 115, 202
BstMAI GTCTC 2 cut(s) 87, 135
BstMWI GCNNNNNNNGC 2 cut(s) 149, 175
BstSFI CTRYAG 2 cut(s) 39, 135
Bsu36I CCTNAGG 1 cut(s) 202
Csp6I GTAC 1 cut(s) 36
CviJI RGCY 5 cut(s) 44, 104, 143, 149, 233
CviKI_1 RGCY 5 cut(s) 44, 104, 143, 149, 233
CviQI GTAC 1 cut(s) 36
DdeI CTNAG 2 cut(s) 115, 202
Eco81I CCTNAGG 1 cut(s) 202
FaiI YATR 4 cut(s) 53, 72, 191, 213
FalI AAGNNNNNCTT 2 cut(s) 206, 238
FauI CCCGC 1 cut(s) 162
Fnu4HI GCNGC 1 cut(s) 150
Fsp4HI GCNGC 1 cut(s) 150
GluI GCNGC 1 cut(s) 150
HinfI GANTC 1 cut(s) 95
Hpy188I TCNGA 1 cut(s) 118
HpyCH4V TGCA 1 cut(s) 137
HpyF10VI GCNNNNNNNGC 2 cut(s) 149, 175
HpyF3I CTNAG 2 cut(s) 115, 202
LpnPI CCDG 3 cut(s) 18, 147, 151
LweI GCATC 1 cut(s) 20
MhlI GDGCHC 1 cut(s) 116
MluCI AATT 2 cut(s) 122, 227
MlyI GAGTC 1 cut(s) 89
MnlI CCTC 2 cut(s) 55, 133
MroXI GAANNNNTTC 1 cut(s) 123
MwoI GCNNNNNNNGC 2 cut(s) 149, 175
NlaIV GGNNCC 1 cut(s) 187
PdmI GAANNNNTTC 1 cut(s) 123
PkrI GCNGC 1 cut(s) 151
PleI GAGTC 1 cut(s) 89
PpsI GAGTC 1 cut(s) 89
PspN4I GGNNCC 1 cut(s) 187
PstI CTGCAG 1 cut(s) 139
RsaI GTAC 1 cut(s) 37
RsaNI GTAC 1 cut(s) 36
SatI GCNGC 1 cut(s) 150
SchI GAGTC 1 cut(s) 89
SduI GDGCHC 1 cut(s) 116
SfaNI GCATC 1 cut(s) 20
SfcI CTRYAG 2 cut(s) 39, 135
SgeI CNNG 8 cut(s) 27, 38, 45, 58, 71, 146, 178, 182
Sse9I AATT 2 cut(s) 122, 227
SsiI CCGC 2 cut(s) 150, 169
SspI AATATT 1 cut(s) 88
TaqI TCGA 1 cut(s) 47
TasI AATT 2 cut(s) 122, 227
TauI GCSGC 1 cut(s) 152
TspDTI ATGAA 1 cut(s) 17
XapI RAATTY 1 cut(s) 122
XmnI GAANNNNTTC 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.