Rmu_co8010160.1_g000001

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8010160.1
N/A
Physical Location & Seq
Reverse (-)
1 .. 336
336 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8010160.1_g000001.1.cds

Sequence Viewer

Length: 206 bp
atggattctgctcggagttggtttcagaagtttcagccgagagcgaagaagaaggggacggaaaatgctagagatgaaaggccggcggcttctttggacgacgaggcgccgtcggctgcgaccaagcagaaggttgaggcggccaagcagtatatcgagaatcactacaaggcgcaaatgaagtgcttgcaggataggaaggagag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

68

Amino Acids

7.86

Weight (kDa)

9.37

Isoelectric Point (pI)

59.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 106
AciI CCGC 2 cut(s) 86, 140
AcoI YGGCCR 1 cut(s) 141
AcyI GRCGYC 1 cut(s) 107
AoxI GGCC 2 cut(s) 80, 141
ApeKI GCWGC 1 cut(s) 116
AspLEI GCGC 2 cut(s) 109, 175
BanI GGYRCC 1 cut(s) 106
BbvI GCAGC 1 cut(s) 103
BceAI ACGGC 1 cut(s) 94
BfaI CTAG 1 cut(s) 69
BfoI RGCGCY 1 cut(s) 110
BisI GCNGC 3 cut(s) 87, 117, 141
BlsI GCNGC 3 cut(s) 88, 118, 142
BmiI GGNNCC 1 cut(s) 108
BsaHI GRCGYC 1 cut(s) 107
Bse118I RCCGGY 1 cut(s) 82
BseXI GCAGC 1 cut(s) 103
BshFI GGCC 2 cut(s) 82, 143
BshNI GGYRCC 1 cut(s) 106
BsiSI CCGG 1 cut(s) 83
BslFI GGGAC 1 cut(s) 70
BsmFI GGGAC 1 cut(s) 70
BsnI GGCC 2 cut(s) 82, 143
BspACI CCGC 2 cut(s) 86, 140
BspANI GGCC 2 cut(s) 82, 143
BspLI GGNNCC 1 cut(s) 108
BspT107I GGYRCC 1 cut(s) 106
BsrFI RCCGGY 1 cut(s) 82
BssAI RCCGGY 1 cut(s) 82
BssNI GRCGYC 1 cut(s) 107
BstACI GRCGYC 1 cut(s) 107
BstC8I GCNNGC 2 cut(s) 84, 188
BstH2I RGCGCY 1 cut(s) 110
BstHHI GCGC 2 cut(s) 109, 175
BstMWI GCNNNNNNNGC 1 cut(s) 113
BstV1I GCAGC 1 cut(s) 103
BsuRI GGCC 2 cut(s) 82, 143
Cac8I GCNNGC 2 cut(s) 84, 188
CfoI GCGC 2 cut(s) 109, 175
Cfr10I RCCGGY 1 cut(s) 82
CviJI RGCY 5 cut(s) 37, 82, 89, 116, 143
CviKI_1 RGCY 5 cut(s) 37, 82, 89, 116, 143
DinI GGCGCC 1 cut(s) 108
EaeI YGGCCR 1 cut(s) 141
EgeI GGCGCC 1 cut(s) 108
EheI GGCGCC 1 cut(s) 108
FaiI YATR 1 cut(s) 153
FaqI GGGAC 1 cut(s) 70
Fnu4HI GCNGC 3 cut(s) 87, 117, 141
Fsp4HI GCNGC 3 cut(s) 87, 117, 141
FspBI CTAG 1 cut(s) 69
GlaI GCGC 2 cut(s) 108, 174
GluI GCNGC 3 cut(s) 87, 117, 141
HaeII RGCGCY 1 cut(s) 110
HaeIII GGCC 2 cut(s) 82, 143
HapII CCGG 1 cut(s) 83
HhaI GCGC 2 cut(s) 109, 175
Hin1I GRCGYC 1 cut(s) 107
Hin6I GCGC 2 cut(s) 107, 173
HinP1I GCGC 2 cut(s) 107, 173
HinfI GANTC 2 cut(s) 5, 160
HpaII CCGG 1 cut(s) 83
Hpy188I TCNGA 2 cut(s) 15, 27
Hpy188III TCNNGA 1 cut(s) 157
Hpy99I CGWCG 2 cut(s) 104, 115
HpyAV CCTTC 3 cut(s) 46, 124, 193
HpyCH4V TGCA 1 cut(s) 190
HpyF10VI GCNNNNNNNGC 1 cut(s) 113
Hsp92I GRCGYC 1 cut(s) 107
HspAI GCGC 2 cut(s) 107, 173
KasI GGCGCC 1 cut(s) 106
KroI GCCGGC 1 cut(s) 82
KroNI GCCGGC 1 cut(s) 84
LpnPI CCDG 2 cut(s) 96, 176
Lsp1109I GCAGC 1 cut(s) 103
MaeI CTAG 1 cut(s) 69
MboII GAAGA 2 cut(s) 58, 61
Mly113I GGCGCC 1 cut(s) 107
MnlI CCTC 2 cut(s) 97, 130
MroNI GCCGGC 1 cut(s) 82
MspI CCGG 1 cut(s) 83
MwoI GCNNNNNNNGC 1 cut(s) 113
NaeI GCCGGC 1 cut(s) 84
NarI GGCGCC 1 cut(s) 107
NgoMIV GCCGGC 1 cut(s) 82
NlaIV GGNNCC 1 cut(s) 108
NmeAIII GCCGAG 1 cut(s) 63
PdiI GCCGGC 1 cut(s) 84
PfeI GAWTC 2 cut(s) 5, 160
PkrI GCNGC 3 cut(s) 88, 118, 142
PluTI GGCGCC 1 cut(s) 110
PspN4I GGNNCC 1 cut(s) 108
SatI GCNGC 3 cut(s) 87, 117, 141
SetI ASST 1 cut(s) 135
SfoI GGCGCC 1 cut(s) 108
SsiI CCGC 2 cut(s) 86, 140
SspDI GGCGCC 1 cut(s) 106
SspMI CTAG 1 cut(s) 69
TaqI TCGA 1 cut(s) 156
TauI GCSGC 2 cut(s) 89, 143
TfiI GAWTC 2 cut(s) 5, 160
TseI GCWGC 1 cut(s) 116
TspDTI ATGAA 2 cut(s) 90, 194
TspGWI ACGGA 1 cut(s) 74
XspI CTAG 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.