Rmu_co8021712.1_g000001

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8021712.1
N/A
Physical Location & Seq
Reverse (-)
1 .. 483
483 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8021712.1_g000001.1.cds

Sequence Viewer

Length: 204 bp
atgctccttttattctgcatttttcttaatttgcttggaaatgcagatgataatcaggtgccgttgagctgggatttgagggttgcaatagctcttgatgttgcaaggggattggaatacctacattacggggctgttcctcctgttgtgcaccgcgacatcaagtcttccaacatactgttggaccagtcaatgaaggctaag

Protein Analysis

68

Amino Acids

7.61

Weight (kDa)

5.99

Isoelectric Point (pI)

39.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 58
AccII CGCG 1 cut(s) 156
AciI CCGC 1 cut(s) 154
AhdI GACNNNNNGTC 1 cut(s) 163
AluBI AGCT 2 cut(s) 69, 92
AluI AGCT 2 cut(s) 69, 92
Alw21I GWGCWC 1 cut(s) 153
Alw44I GTGCAC 1 cut(s) 149
ApaLI GTGCAC 1 cut(s) 149
AspS9I GGNCC 1 cut(s) 184
AvaII GGWCC 1 cut(s) 184
BaeGI GKGCMC 1 cut(s) 153
BanI GGYRCC 1 cut(s) 58
BbsI GAAGAC 1 cut(s) 159
Bbv12I GWGCWC 1 cut(s) 153
BceAI ACGGC 1 cut(s) 46
Bme18I GGWCC 1 cut(s) 184
BmeRI GACNNNNNGTC 1 cut(s) 163
BmgT120I GGNCC 1 cut(s) 184
BmiI GGNNCC 1 cut(s) 60
BpiI GAAGAC 1 cut(s) 159
BsaBI GATNNNNATC 1 cut(s) 51
Bse1I ACTGG 1 cut(s) 187
Bse8I GATNNNNATC 1 cut(s) 51
BseJI GATNNNNATC 1 cut(s) 51
BseNI ACTGG 1 cut(s) 187
BseSI GKGCMC 1 cut(s) 153
BseYI CCCAGC 1 cut(s) 69
Bsh1236I CGCG 1 cut(s) 156
BshNI GGYRCC 1 cut(s) 58
BsiHKAI GWGCWC 1 cut(s) 153
Bsp1286I GDGCHC 1 cut(s) 153
BspACI CCGC 1 cut(s) 154
BspFNI CGCG 1 cut(s) 156
BspLI GGNNCC 1 cut(s) 60
BspT107I GGYRCC 1 cut(s) 58
BsrI ACTGG 1 cut(s) 187
Bst4CI ACNGT 1 cut(s) 180
BstDEI CTNAG 1 cut(s) 201
BstFNI CGCG 1 cut(s) 156
BstSLI GKGCMC 1 cut(s) 153
BstUI CGCG 1 cut(s) 156
BstV2I GAAGAC 1 cut(s) 159
Cfr13I GGNCC 1 cut(s) 184
CviJI RGCY 4 cut(s) 69, 92, 134, 200
CviKI_1 RGCY 4 cut(s) 69, 92, 134, 200
DdeI CTNAG 1 cut(s) 201
DriI GACNNNNNGTC 1 cut(s) 163
Eam1105I GACNNNNNGTC 1 cut(s) 163
Eco47I GGWCC 1 cut(s) 184
FaiI YATR 1 cut(s) 176
GsaI CCCAGC 1 cut(s) 73
Hpy166II GTNNAC 1 cut(s) 151
Hpy188III TCNNGA 1 cut(s) 95
Hpy8I GTNNAC 1 cut(s) 151
HpyAV CCTTC 1 cut(s) 190
HpyCH4III ACNGT 1 cut(s) 180
HpyCH4V TGCA 5 cut(s) 18, 44, 86, 104, 151
HpyF3I CTNAG 1 cut(s) 201
LmnI GCTCC 1 cut(s) 9
LpnPI CCDG 4 cut(s) 41, 55, 156, 200
MboII GAAGA 1 cut(s) 159
MhlI GDGCHC 1 cut(s) 153
MluCI AATT 1 cut(s) 28
MmeI TCCRAC 2 cut(s) 162, 195
MnlI CCTC 2 cut(s) 72, 150
MseI TTAA 1 cut(s) 27
MvnI CGCG 1 cut(s) 156
NlaIV GGNNCC 1 cut(s) 60
PspFI CCCAGC 1 cut(s) 69
PspN4I GGNNCC 1 cut(s) 60
PspPI GGNCC 1 cut(s) 184
SaqAI TTAA 1 cut(s) 27
Sau96I GGNCC 1 cut(s) 184
SduI GDGCHC 1 cut(s) 153
SetI ASST 4 cut(s) 60, 71, 94, 123
SinI GGWCC 1 cut(s) 184
Sse9I AATT 1 cut(s) 28
SsiI CCGC 1 cut(s) 154
TaaI ACNGT 1 cut(s) 180
TasI AATT 1 cut(s) 28
Tru1I TTAA 1 cut(s) 27
Tru9I TTAA 1 cut(s) 27
VneI GTGCAC 1 cut(s) 149
VpaK11BI GGWCC 1 cut(s) 184
XcmI CCANNNNNNNNNTGG 1 cut(s) 178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.