Rmu_co8028050.1_g000001

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8028050.1
N/A
Physical Location & Seq
Forward (+)
1 .. 252
252 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8028050.1_g000001.1.cds

Sequence Viewer

Length: 252 bp
cttggaatttcgctcctatgtaccagcaacagggcggaagatcgtcccacgatgaaggatgtggctgcattgttgagagaaattcgacatgatcagcccgcaacaggaagcgaggcacacaagcctgctagcaccgggttgaagaactcatcttcttccgtgactccagctcaactgctgatgatacaaggatcttctcattgctcacttgcctactcttcttcagctggttatctatcaggaacccaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

83

Amino Acids

8.66

Weight (kDa)

8.04

Isoelectric Point (pI)

42.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 35, 99
AclWI GGATC 1 cut(s) 199
AcsI RAATTY 2 cut(s) 6, 81
AcuI CTGAAG 1 cut(s) 207
AfaI GTAC 1 cut(s) 22
AfiI CCNNNNNNNGG 2 cut(s) 30, 104
AgsI TTSAA 1 cut(s) 142
AluBI AGCT 2 cut(s) 170, 227
AluI AGCT 2 cut(s) 170, 227
AlwI GGATC 1 cut(s) 199
ApeKI GCWGC 1 cut(s) 65
ApoI RAATTY 2 cut(s) 6, 81
AsuC2I CCSGG 1 cut(s) 136
AsuNHI GCTAGC 1 cut(s) 128
BbvI GCAGC 1 cut(s) 52
BclI TGATCA 1 cut(s) 91
BcnI CCSGG 1 cut(s) 136
BfaI CTAG 1 cut(s) 129
BisI GCNGC 1 cut(s) 66
BlsI GCNGC 1 cut(s) 67
Bme1390I CCNGG 1 cut(s) 136
BmiI GGNNCC 1 cut(s) 244
BmrFI CCNGG 1 cut(s) 136
BmtI GCTAGC 1 cut(s) 132
BpmI CTGGAG 1 cut(s) 150
BpuMI CCSGG 1 cut(s) 136
Bsc4I CCNNNNNNNGG 2 cut(s) 30, 104
Bse3DI GCAATG 1 cut(s) 199
BseGI GGATG 1 cut(s) 64
BseLI CCNNNNNNNGG 2 cut(s) 30, 104
BseMI GCAATG 1 cut(s) 199
BseXI GCAGC 1 cut(s) 52
BsiSI CCGG 1 cut(s) 135
BslFI GGGAC 1 cut(s) 30
BslI CCNNNNNNNGG 2 cut(s) 30, 104
BsmFI GGGAC 1 cut(s) 30
Bsp143I GATC 3 cut(s) 40, 91, 191
BspACI CCGC 2 cut(s) 35, 99
BspLI GGNNCC 1 cut(s) 244
BspOI GCTAGC 1 cut(s) 132
BspPI GGATC 1 cut(s) 199
BsrDI GCAATG 1 cut(s) 199
BssMI GATC 3 cut(s) 40, 91, 191
Bst6I CTCTTC 1 cut(s) 223
BstC8I GCNNGC 3 cut(s) 99, 126, 130
BstF5I GGATG 1 cut(s) 64
BstKTI GATC 3 cut(s) 43, 94, 194
BstMBI GATC 3 cut(s) 40, 91, 191
BstSCI CCNGG 1 cut(s) 134
BstV1I GCAGC 1 cut(s) 52
BstX2I RGATCY 1 cut(s) 191
BstYI RGATCY 1 cut(s) 191
BtsCI GGATG 1 cut(s) 64
Cac8I GCNNGC 3 cut(s) 99, 126, 130
Csp6I GTAC 1 cut(s) 21
CviAII CATG 1 cut(s) 89
CviJI RGCY 5 cut(s) 65, 97, 124, 170, 227
CviKI_1 RGCY 5 cut(s) 65, 97, 124, 170, 227
CviQI GTAC 1 cut(s) 21
DpnI GATC 3 cut(s) 42, 93, 193
DpnII GATC 3 cut(s) 40, 91, 191
Eam1104I CTCTTC 1 cut(s) 223
EarI CTCTTC 1 cut(s) 223
EciI GGCGGA 1 cut(s) 50
Eco57I CTGAAG 1 cut(s) 207
FaeI CATG 1 cut(s) 92
FaiI YATR 2 cut(s) 19, 90
FaqI GGGAC 1 cut(s) 30
FatI CATG 1 cut(s) 88
FauI CCCGC 1 cut(s) 106
FbaI TGATCA 1 cut(s) 91
Fnu4HI GCNGC 1 cut(s) 66
FokI GGATG 1 cut(s) 71
Fsp4HI GCNGC 1 cut(s) 66
FspBI CTAG 1 cut(s) 129
GluI GCNGC 1 cut(s) 66
GsuI CTGGAG 1 cut(s) 150
HapII CCGG 1 cut(s) 135
Hin1II CATG 1 cut(s) 92
HinfI GANTC 1 cut(s) 163
HpaII CCGG 1 cut(s) 135
Hpy188III TCNNGA 1 cut(s) 240
HpyAV CCTTC 1 cut(s) 49
HpyCH4V TGCA 1 cut(s) 68
Hsp92II CATG 1 cut(s) 92
Ksp22I TGATCA 1 cut(s) 91
Kzo9I GATC 3 cut(s) 40, 91, 191
LmnI GCTCC 1 cut(s) 18
LpnPI CCDG 8 cut(s) 16, 37, 90, 138, 148, 180, 213, 225
Lsp1109I GCAGC 1 cut(s) 52
MaeI CTAG 1 cut(s) 129
MaeIII GTNAC 1 cut(s) 160
MalI GATC 3 cut(s) 42, 93, 193
MboI GATC 3 cut(s) 40, 91, 191
MboII GAAGA 7 cut(s) 50, 144, 147, 154, 186, 210, 213
MflI RGATCY 1 cut(s) 191
MluCI AATT 2 cut(s) 6, 81
MlyI GAGTC 1 cut(s) 157
MnlI CCTC 1 cut(s) 106
MspA1I CMGCKG 1 cut(s) 227
MspI CCGG 1 cut(s) 135
MspR9I CCNGG 1 cut(s) 136
NciI CCSGG 1 cut(s) 136
NdeII GATC 3 cut(s) 40, 91, 191
NheI GCTAGC 1 cut(s) 128
NlaIII CATG 1 cut(s) 92
NlaIV GGNNCC 1 cut(s) 244
NmuCI GTSAC 1 cut(s) 160
PkrI GCNGC 1 cut(s) 67
PleI GAGTC 1 cut(s) 157
PpsI GAGTC 1 cut(s) 157
PspN4I GGNNCC 1 cut(s) 244
PsuI RGATCY 1 cut(s) 191
PvuII CAGCTG 1 cut(s) 227
RsaI GTAC 1 cut(s) 22
RsaNI GTAC 1 cut(s) 21
SatI GCNGC 1 cut(s) 66
Sau3AI GATC 3 cut(s) 40, 91, 191
SchI GAGTC 1 cut(s) 157
ScrFI CCNGG 1 cut(s) 136
SetI ASST 2 cut(s) 172, 229
Sse9I AATT 2 cut(s) 6, 81
SsiI CCGC 2 cut(s) 35, 99
SspMI CTAG 1 cut(s) 129
StyD4I CCNGG 1 cut(s) 134
TaqI TCGA 1 cut(s) 85
TasI AATT 2 cut(s) 6, 81
TseFI GTSAC 1 cut(s) 160
TseI GCWGC 1 cut(s) 65
Tsp45I GTSAC 1 cut(s) 160
TspDTI ATGAA 1 cut(s) 68
TspGWI ACGGA 1 cut(s) 148
XapI RAATTY 2 cut(s) 6, 81
XspI CTAG 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.