Rmu_co8056550.1_g000001
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8056550.1
N/A
Physical Location & Seq
Reverse (-)
2 .. 534
533 bp
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UTR
Exon/CDS
Intron
Rmu_co8056550.1_g000001.1.cds

Sequence Viewer

Length: 242 bp
atggatgcaaagaggttgattggcaggaaattcagtgatgccactgttcaaagtgatttgaaactctggccattcaaggtcgttgaaggtcctgatgataagcctatgattgtggttaaccacgagggacagctaaagaagtttgctgctgatgaaatctcatccatggttctcacaaagatgcggaagactgctgaagcctacctcggatcaaatgtgacgaatgcagttatcactgtccc
Functional Annotation

Protein Analysis

81

Amino Acids

8.98

Weight (kDa)

9.05

Isoelectric Point (pI)

19.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 184
AclWI GGATC 1 cut(s) 217
AcoI YGGCCR 1 cut(s) 68
AcsI RAATTY 1 cut(s) 29
AcuI CTGAAG 1 cut(s) 216
AgsI TTSAA 4 cut(s) 50, 61, 76, 86
AluBI AGCT 1 cut(s) 133
AluI AGCT 1 cut(s) 133
AlwI GGATC 1 cut(s) 217
AoxI GGCC 1 cut(s) 68
ApeKI GCWGC 1 cut(s) 146
ApoI RAATTY 1 cut(s) 29
AspS9I GGNCC 1 cut(s) 89
AvaII GGWCC 1 cut(s) 89
BalI TGGCCA 1 cut(s) 70
BauI CACGAG 1 cut(s) 122
BbsI GAAGAC 1 cut(s) 194
BbvI GCAGC 1 cut(s) 133
BisI GCNGC 1 cut(s) 147
BlsI GCNGC 1 cut(s) 148
Bme18I GGWCC 1 cut(s) 89
BmgT120I GGNCC 1 cut(s) 89
BmsI GCATC 2 cut(s) 28, 171
BpiI GAAGAC 1 cut(s) 194
BsaJI CCNNGG 2 cut(s) 165, 205
BseDI CCNNGG 2 cut(s) 165, 205
BseGI GGATG 2 cut(s) 10, 161
BseXI GCAGC 1 cut(s) 133
BshFI GGCC 1 cut(s) 70
BslFI GGGAC 2 cut(s) 141, 224
BsmFI GGGAC 2 cut(s) 141, 224
BsmI GAATGC 1 cut(s) 229
BsnI GGCC 1 cut(s) 70
Bsp143I GATC 1 cut(s) 209
Bsp19I CCATGG 1 cut(s) 165
BspACI CCGC 1 cut(s) 184
BspANI GGCC 1 cut(s) 70
BspPI GGATC 1 cut(s) 217
BssECI CCNNGG 2 cut(s) 165, 205
BssMI GATC 1 cut(s) 209
BssSI CACGAG 1 cut(s) 122
BssT1I CCWWGG 1 cut(s) 165
Bst2BI CACGAG 1 cut(s) 122
Bst4CI ACNGT 2 cut(s) 46, 238
BstDSI CCRYGG 1 cut(s) 165
BstF5I GGATG 2 cut(s) 10, 161
BstKTI GATC 1 cut(s) 212
BstMBI GATC 1 cut(s) 209
BstV1I GCAGC 1 cut(s) 133
BstV2I GAAGAC 1 cut(s) 194
BsuRI GGCC 1 cut(s) 70
BtgI CCRYGG 1 cut(s) 165
BtsCI GGATG 2 cut(s) 10, 161
BtsIMutI CAGTG 3 cut(s) 40, 42, 234
Cfr13I GGNCC 1 cut(s) 89
CviAII CATG 1 cut(s) 166
CviJI RGCY 4 cut(s) 70, 103, 133, 200
CviKI_1 RGCY 4 cut(s) 70, 103, 133, 200
DpnI GATC 1 cut(s) 211
DpnII GATC 1 cut(s) 209
EaeI YGGCCR 1 cut(s) 68
Eco130I CCWWGG 1 cut(s) 165
Eco47I GGWCC 1 cut(s) 89
Eco57I CTGAAG 1 cut(s) 216
EcoO109I RGGNCCY 1 cut(s) 89
EcoT14I CCWWGG 1 cut(s) 165
ErhI CCWWGG 1 cut(s) 165
FaeI CATG 1 cut(s) 169
FaiI YATR 2 cut(s) 107, 167
FaqI GGGAC 2 cut(s) 141, 224
FatI CATG 1 cut(s) 165
Fnu4HI GCNGC 1 cut(s) 147
FokI GGATG 2 cut(s) 17, 148
Fsp4HI GCNGC 1 cut(s) 147
GluI GCNGC 1 cut(s) 147
HaeIII GGCC 1 cut(s) 70
Hin1II CATG 1 cut(s) 169
HincII GTYRAC 1 cut(s) 118
HindII GTYRAC 1 cut(s) 118
HpaI GTTAAC 1 cut(s) 118
Hpy166II GTNNAC 1 cut(s) 118
Hpy188I TCNGA 1 cut(s) 209
Hpy188III TCNNGA 1 cut(s) 92
Hpy8I GTNNAC 1 cut(s) 118
HpyAV CCTTC 1 cut(s) 80
HpyCH4III ACNGT 2 cut(s) 46, 238
HpyCH4V TGCA 2 cut(s) 8, 227
Hsp92II CATG 1 cut(s) 169
KspAI GTTAAC 1 cut(s) 118
Kzo9I GATC 1 cut(s) 209
LpnPI CCDG 3 cut(s) 10, 52, 105
Lsp1109I GCAGC 1 cut(s) 133
LweI GCATC 2 cut(s) 28, 171
MaeIII GTNAC 1 cut(s) 217
MalI GATC 1 cut(s) 211
MboI GATC 1 cut(s) 209
MboII GAAGA 1 cut(s) 199
MlsI TGGCCA 1 cut(s) 70
MluCI AATT 1 cut(s) 29
MluNI TGGCCA 1 cut(s) 70
MnlI CCTC 3 cut(s) 6, 118, 215
Mox20I TGGCCA 1 cut(s) 70
MscI TGGCCA 1 cut(s) 70
MseI TTAA 1 cut(s) 117
MslI CAYNNNNRTG 1 cut(s) 179
Msp20I TGGCCA 1 cut(s) 70
Mva1269I GAATGC 1 cut(s) 229
NcoI CCATGG 1 cut(s) 165
NdeII GATC 1 cut(s) 209
NlaIII CATG 1 cut(s) 169
NmuCI GTSAC 1 cut(s) 217
PctI GAATGC 1 cut(s) 229
PkrI GCNGC 1 cut(s) 148
PpuMI RGGWCCY 1 cut(s) 89
Psp5II RGGWCCY 1 cut(s) 89
PspPI GGNCC 1 cut(s) 89
PspPPI RGGWCCY 1 cut(s) 89
RseI CAYNNNNRTG 1 cut(s) 179
SaqAI TTAA 1 cut(s) 117
SatI GCNGC 1 cut(s) 147
Sau3AI GATC 1 cut(s) 209
Sau96I GGNCC 1 cut(s) 89
SetI ASST 5 cut(s) 17, 81, 91, 135, 207
SfaNI GCATC 2 cut(s) 28, 171
SgeI CNNG 8 cut(s) 37, 79, 88, 104, 134, 136, 178, 218
SinI GGWCC 1 cut(s) 89
SmiMI CAYNNNNRTG 1 cut(s) 179
Sse9I AATT 1 cut(s) 29
SsiI CCGC 1 cut(s) 184
StyI CCWWGG 1 cut(s) 165
TaaI ACNGT 2 cut(s) 46, 238
TasI AATT 1 cut(s) 29
Tru1I TTAA 1 cut(s) 117
Tru9I TTAA 1 cut(s) 117
TscAI CASTG 3 cut(s) 40, 49, 241
TseFI GTSAC 1 cut(s) 217
TseI GCWGC 1 cut(s) 146
Tsp45I GTSAC 1 cut(s) 217
TspDTI ATGAA 1 cut(s) 168
TspRI CASTG 3 cut(s) 40, 49, 241
VpaK11BI GGWCC 1 cut(s) 89
XapI RAATTY 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.