Rmu_co8106590.1_g000001

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8106590.1
N/A
Physical Location & Seq
Forward (+)
1 .. 606
606 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8106590.1_g000001.1.cds

Sequence Viewer

Length: 383 bp
tgcagaccaaatacagactttatctcgtgctggattttgtcaatggaggtcaccttttctttcagctctaccaccatggccttttcagggaagagctggcacgaatatatgctgcagagattgtttctgccgtatctcacctccatgcaaatggcataatgcatagggatcttaaacctgaaaatatcttattggatgtagatggccatgccatgttgactgattttgggcttgcaaagaaatttgacgaaaatacaagatctaattctctatgtggaactgtagaatacatggcacctgaaataattcagggaaagggccatgataaggcagcagattggtggagtgtgggagttctattgtttgagatgcttactggaaag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008285 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009651 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0035556 GO:0036211 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045727 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko01521 ko01522 ko04012 ko04066 ko04140 ko04150 ko04151 ko04152 ko04211 ko04212 ko04213 ko04350 ko04371 ko04666 ko04714 ko04910 ko04931 ko05165 ko05200 ko05205 ko05210 ko05212 ko05221 ko05224 ko05225 ko05226 ko05231 map01521 map01522 map04012 map04066 map04140 map04150 map04151 map04152 map04211 map04212 map04213 map04350 map04371 map04666 map04714 map04910 map04931 map05165 map05200 map05205 map05210 map05212 map05221 map05224 map05225 map05226 map05231
Pfam Domains
Protein Families
Pkinase Pkinase_C

Protein Analysis

127

Amino Acids

14.42

Weight (kDa)

6.03

Isoelectric Point (pI)

26.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 294
AclWI GGATC 1 cut(s) 176
AcoI YGGCCR 1 cut(s) 204
AcsI RAATTY 1 cut(s) 241
AfiI CCNNNNNNNGG 2 cut(s) 87, 327
AluBI AGCT 2 cut(s) 66, 96
AluI AGCT 2 cut(s) 66, 96
AlwI GGATC 1 cut(s) 176
AoxI GGCC 3 cut(s) 78, 204, 318
ApeKI GCWGC 2 cut(s) 112, 331
ApoI RAATTY 1 cut(s) 241
Asp700I GAANNNNTTC 1 cut(s) 305
AspS9I GGNCC 1 cut(s) 318
AsuHPI GGTGA 2 cut(s) 43, 130
BalI TGGCCA 1 cut(s) 206
BanI GGYRCC 1 cut(s) 294
BauI CACGAG 1 cut(s) 25
BbvI GCAGC 2 cut(s) 99, 343
BccI CCATC 1 cut(s) 196
BceAI ACGGC 1 cut(s) 115
BfmI CTRYAG 2 cut(s) 113, 281
BglII AGATCT 1 cut(s) 259
BisI GCNGC 2 cut(s) 113, 332
BlsI GCNGC 2 cut(s) 114, 333
BmgT120I GGNCC 1 cut(s) 318
BmiI GGNNCC 1 cut(s) 296
BmsI GCATC 1 cut(s) 359
BsaJI CCNNGG 1 cut(s) 75
Bsc4I CCNNNNNNNGG 2 cut(s) 87, 327
Bse1I ACTGG 1 cut(s) 381
BseDI CCNNGG 1 cut(s) 75
BseGI GGATG 1 cut(s) 201
BseLI CCNNNNNNNGG 2 cut(s) 87, 327
BseNI ACTGG 1 cut(s) 381
BseXI GCAGC 2 cut(s) 99, 343
BshFI GGCC 3 cut(s) 80, 206, 320
BshNI GGYRCC 1 cut(s) 294
BslI CCNNNNNNNGG 2 cut(s) 87, 327
BsnI GGCC 3 cut(s) 80, 206, 320
Bsp143I GATC 2 cut(s) 168, 259
Bsp19I CCATGG 1 cut(s) 75
BspANI GGCC 3 cut(s) 80, 206, 320
BspLI GGNNCC 1 cut(s) 296
BspMAI CTGCAG 1 cut(s) 117
BspPI GGATC 1 cut(s) 176
BspQI GCTCTTC 1 cut(s) 86
BspT107I GGYRCC 1 cut(s) 294
BsrI ACTGG 1 cut(s) 381
BssECI CCNNGG 1 cut(s) 75
BssMI GATC 2 cut(s) 168, 259
BssSI CACGAG 1 cut(s) 25
BssT1I CCWWGG 1 cut(s) 75
Bst2BI CACGAG 1 cut(s) 25
Bst4CI ACNGT 1 cut(s) 282
Bst6I CTCTTC 1 cut(s) 86
BstC8I GCNNGC 2 cut(s) 98, 233
BstDSI CCRYGG 1 cut(s) 75
BstEII GGTNACC 1 cut(s) 49
BstF5I GGATG 1 cut(s) 201
BstKTI GATC 2 cut(s) 171, 262
BstMBI GATC 2 cut(s) 168, 259
BstPI GGTNACC 1 cut(s) 49
BstSFI CTRYAG 2 cut(s) 113, 281
BstV1I GCAGC 2 cut(s) 99, 343
BstX2I RGATCY 2 cut(s) 168, 259
BstXI CCANNNNNNTGG 1 cut(s) 151
BstYI RGATCY 2 cut(s) 168, 259
BsuRI GGCC 3 cut(s) 80, 206, 320
BtgI CCRYGG 1 cut(s) 75
BtsCI GGATG 1 cut(s) 201
Cac8I GCNNGC 2 cut(s) 98, 233
Cfr13I GGNCC 1 cut(s) 318
CviAII CATG 6 cut(s) 76, 145, 208, 213, 291, 322
CviJI RGCY 6 cut(s) 66, 80, 96, 206, 231, 320
CviKI_1 RGCY 6 cut(s) 66, 80, 96, 206, 231, 320
DpnI GATC 2 cut(s) 170, 261
DpnII GATC 2 cut(s) 168, 259
EaeI YGGCCR 1 cut(s) 204
Eam1104I CTCTTC 1 cut(s) 86
EarI CTCTTC 1 cut(s) 86
Eco130I CCWWGG 1 cut(s) 75
Eco91I GGTNACC 1 cut(s) 49
EcoO65I GGTNACC 1 cut(s) 49
EcoT14I CCWWGG 1 cut(s) 75
EcoT22I ATGCAT 1 cut(s) 164
ErhI CCWWGG 1 cut(s) 75
FaeI CATG 6 cut(s) 79, 148, 211, 216, 294, 325
FatI CATG 6 cut(s) 75, 144, 207, 212, 290, 321
Fnu4HI GCNGC 2 cut(s) 113, 332
FokI GGATG 1 cut(s) 208
Fsp4HI GCNGC 2 cut(s) 113, 332
GluI GCNGC 2 cut(s) 113, 332
HaeIII GGCC 3 cut(s) 80, 206, 320
Hin1II CATG 6 cut(s) 79, 148, 211, 216, 294, 325
HincII GTYRAC 1 cut(s) 218
HindII GTYRAC 1 cut(s) 218
HphI GGTGA 2 cut(s) 43, 130
Hpy166II GTNNAC 1 cut(s) 218
Hpy8I GTNNAC 1 cut(s) 218
HpyCH4III ACNGT 1 cut(s) 282
HpyCH4V TGCA 5 cut(s) 3, 115, 148, 162, 235
Hsp92II CATG 6 cut(s) 79, 148, 211, 216, 294, 325
Kzo9I GATC 2 cut(s) 168, 259
LguI GCTCTTC 1 cut(s) 86
LpnPI CCDG 7 cut(s) 16, 72, 82, 191, 295, 311, 362
Lsp1109I GCAGC 2 cut(s) 99, 343
LweI GCATC 1 cut(s) 359
MaeIII GTNAC 1 cut(s) 49
MalI GATC 2 cut(s) 170, 261
MboI GATC 2 cut(s) 168, 259
MboII GAAGA 1 cut(s) 103
MflI RGATCY 2 cut(s) 168, 259
MlsI TGGCCA 1 cut(s) 206
MluCI AATT 3 cut(s) 241, 264, 305
MluNI TGGCCA 1 cut(s) 206
MnlI CCTC 2 cut(s) 40, 151
Mox20I TGGCCA 1 cut(s) 206
Mph1103I ATGCAT 1 cut(s) 164
MroXI GAANNNNTTC 1 cut(s) 305
MscI TGGCCA 1 cut(s) 206
MseI TTAA 1 cut(s) 173
MslI CAYNNNNRTG 2 cut(s) 143, 149
Msp20I TGGCCA 1 cut(s) 206
NcoI CCATGG 1 cut(s) 75
NdeII GATC 2 cut(s) 168, 259
NlaIII CATG 6 cut(s) 79, 148, 211, 216, 294, 325
NlaIV GGNNCC 1 cut(s) 296
NmuCI GTSAC 1 cut(s) 49
NsiI ATGCAT 1 cut(s) 164
PciSI GCTCTTC 1 cut(s) 86
PdmI GAANNNNTTC 1 cut(s) 305
PkrI GCNGC 2 cut(s) 114, 333
PspEI GGTNACC 1 cut(s) 49
PspN4I GGNNCC 1 cut(s) 296
PspPI GGNCC 1 cut(s) 318
PstI CTGCAG 1 cut(s) 117
PsuI RGATCY 2 cut(s) 168, 259
RseI CAYNNNNRTG 2 cut(s) 143, 149
SapI GCTCTTC 1 cut(s) 86
SaqAI TTAA 1 cut(s) 173
SatI GCNGC 2 cut(s) 113, 332
Sau3AI GATC 2 cut(s) 168, 259
Sau96I GGNCC 1 cut(s) 318
SetI ASST 7 cut(s) 51, 56, 68, 98, 143, 180, 300
SfaNI GCATC 1 cut(s) 359
SfcI CTRYAG 2 cut(s) 113, 281
SmiMI CAYNNNNRTG 2 cut(s) 143, 149
Sse9I AATT 3 cut(s) 241, 264, 305
StyI CCWWGG 1 cut(s) 75
TaaI ACNGT 1 cut(s) 282
TasI AATT 3 cut(s) 241, 264, 305
Tru1I TTAA 1 cut(s) 173
Tru9I TTAA 1 cut(s) 173
TseFI GTSAC 1 cut(s) 49
TseI GCWGC 2 cut(s) 112, 331
Tsp45I GTSAC 1 cut(s) 49
XapI RAATTY 1 cut(s) 241
XmnI GAANNNNTTC 1 cut(s) 305
Zsp2I ATGCAT 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.