Rmu_co8107450.1_g000001

Protein kinase domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8107450.1
N/A
Physical Location & Seq
Forward (+)
291 .. 607
317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8107450.1_g000001.1.cds

Sequence Viewer

Length: 317 bp
atgccggagcttcgaaaaggtgtccgccgaggtcgtgctagggtagctcacaagccgtcggaccccccgccgccgccgcctccgtctcgaaggacgcgtgccacggtcgcgaggcaggtagctgaggctgtggtcaggccgaggacgaggttggccgtgaaaaagctgaaggaggaggaggtgctgccggagccggagaaggagaacgagaaggaccgcgtgattgtgatttcggagaaggaagactccgattcggagggtgaaagggaggaagaagaagtagaagaagaggaggaggaggaggaggaggaggagga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

105

Amino Acids

12.16

Weight (kDa)

4.84

Isoelectric Point (pI)

104.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 106
AccII CGCG 3 cut(s) 97, 110, 219
AciI CCGC 6 cut(s) 25, 68, 71, 74, 77, 217
AcoI YGGCCR 1 cut(s) 153
AcuI CTGAAG 1 cut(s) 188
AflIII ACRYGT 1 cut(s) 95
AluBI AGCT 4 cut(s) 10, 47, 122, 166
AluI AGCT 4 cut(s) 10, 47, 122, 166
Alw26I GTCTC 1 cut(s) 90
AoxI GGCC 2 cut(s) 137, 153
ApeKI GCWGC 1 cut(s) 184
AspS9I GGNCC 2 cut(s) 61, 214
AsuHPI GGTGA 1 cut(s) 272
AsuII TTCGAA 1 cut(s) 13
AvaII GGWCC 2 cut(s) 61, 214
BbsI GAAGAC 1 cut(s) 249
BbvCI CCTCAGC 1 cut(s) 123
BbvI GCAGC 1 cut(s) 171
BceAI ACGGC 2 cut(s) 40, 140
BcoDI GTCTC 1 cut(s) 90
BfaI CTAG 1 cut(s) 39
BfuAI ACCTGC 1 cut(s) 106
BisI GCNGC 4 cut(s) 71, 74, 77, 185
BlsI GCNGC 4 cut(s) 72, 75, 78, 186
Bme18I GGWCC 2 cut(s) 61, 214
BmgT120I GGNCC 2 cut(s) 61, 214
BmiI GGNNCC 2 cut(s) 63, 192
BpiI GAAGAC 1 cut(s) 249
Bpu10I CCTNAGC 1 cut(s) 123
Bpu14I TTCGAA 1 cut(s) 13
BsaJI CCNNGG 3 cut(s) 28, 102, 140
BseDI CCNNGG 3 cut(s) 28, 102, 140
BseMII CTCAG 1 cut(s) 114
BseRI GAGGAG 7 cut(s) 188, 191, 305, 308, 311, 314, 317
BseXI GCAGC 1 cut(s) 171
Bsh1236I CGCG 3 cut(s) 97, 110, 219
Bsh1285I CGRYCG 1 cut(s) 108
BshFI GGCC 2 cut(s) 139, 155
BsiEI CGRYCG 1 cut(s) 108
BsiSI CCGG 3 cut(s) 5, 188, 194
BsmAI GTCTC 1 cut(s) 90
BsmBI CGTCTC 1 cut(s) 90
BsnI GGCC 2 cut(s) 139, 155
Bsp119I TTCGAA 1 cut(s) 13
Bsp68I TCGCGA 1 cut(s) 110
BspACI CCGC 6 cut(s) 25, 68, 71, 74, 77, 217
BspANI GGCC 2 cut(s) 139, 155
BspCNI CTCAG 1 cut(s) 115
BspFNI CGCG 3 cut(s) 97, 110, 219
BspLI GGNNCC 2 cut(s) 63, 192
BspMI ACCTGC 1 cut(s) 106
BspT104I TTCGAA 1 cut(s) 13
BssECI CCNNGG 3 cut(s) 28, 102, 140
Bst4CI ACNGT 1 cut(s) 106
Bst6I CTCTTC 1 cut(s) 282
BstBI TTCGAA 1 cut(s) 13
BstC8I GCNNGC 1 cut(s) 99
BstDEI CTNAG 1 cut(s) 123
BstDSI CCRYGG 1 cut(s) 102
BstFNI CGCG 3 cut(s) 97, 110, 219
BstMAI GTCTC 1 cut(s) 90
BstMCI CGRYCG 1 cut(s) 108
BstMWI GCNNNNNNNGC 4 cut(s) 44, 76, 107, 190
BstUI CGCG 3 cut(s) 97, 110, 219
BstV1I GCAGC 1 cut(s) 171
BstV2I GAAGAC 1 cut(s) 249
BsuRI GGCC 2 cut(s) 139, 155
BtgI CCRYGG 1 cut(s) 102
BtuMI TCGCGA 1 cut(s) 110
BveI ACCTGC 1 cut(s) 106
Cac8I GCNNGC 1 cut(s) 99
Cfr13I GGNCC 2 cut(s) 61, 214
CseI GACGC 1 cut(s) 103
CviJI RGCY 9 cut(s) 10, 47, 55, 122, 128, 139, 155, 166, 193
CviKI_1 RGCY 9 cut(s) 10, 47, 55, 122, 128, 139, 155, 166, 193
DdeI CTNAG 1 cut(s) 123
EaeI YGGCCR 1 cut(s) 153
Eam1104I CTCTTC 1 cut(s) 282
EarI CTCTTC 1 cut(s) 282
EciI GGCGGA 1 cut(s) 14
Eco47I GGWCC 2 cut(s) 61, 214
Eco57I CTGAAG 1 cut(s) 188
Esp3I CGTCTC 1 cut(s) 90
FauI CCCGC 1 cut(s) 75
Fnu4HI GCNGC 4 cut(s) 71, 74, 77, 185
Fsp4HI GCNGC 4 cut(s) 71, 74, 77, 185
FspBI CTAG 1 cut(s) 39
GluI GCNGC 4 cut(s) 71, 74, 77, 185
HaeIII GGCC 2 cut(s) 139, 155
HapII CCGG 3 cut(s) 5, 188, 194
HgaI GACGC 1 cut(s) 103
HinfI GANTC 2 cut(s) 245, 251
HpaII CCGG 3 cut(s) 5, 188, 194
HphI GGTGA 1 cut(s) 272
Hpy188I TCNGA 4 cut(s) 61, 235, 250, 256
Hpy188III TCNNGA 2 cut(s) 87, 109
Hpy99I CGWCG 1 cut(s) 61
HpyAV CCTTC 5 cut(s) 84, 163, 193, 205, 232
HpyCH4III ACNGT 1 cut(s) 106
HpyF10VI GCNNNNNNNGC 4 cut(s) 44, 76, 107, 190
HpyF3I CTNAG 1 cut(s) 123
LmnI GCTCC 2 cut(s) 7, 190
LpnPI CCDG 5 cut(s) 18, 101, 121, 201, 207
Lsp1109I GCAGC 1 cut(s) 171
MaeI CTAG 1 cut(s) 39
MboII GAAGA 5 cut(s) 254, 284, 287, 296, 299
MluI ACGCGT 1 cut(s) 95
MlyI GAGTC 1 cut(s) 239
MmeI TCCRAC 1 cut(s) 39
MspI CCGG 3 cut(s) 5, 188, 194
MvnI CGCG 3 cut(s) 97, 110, 219
MwoI GCNNNNNNNGC 4 cut(s) 44, 76, 107, 190
NlaIV GGNNCC 2 cut(s) 63, 192
NmeAIII GCCGAG 2 cut(s) 53, 165
NruI TCGCGA 1 cut(s) 110
NspV TTCGAA 1 cut(s) 13
PcsI WCGNNNNNNNCGW 1 cut(s) 94
PfeI GAWTC 1 cut(s) 251
PkrI GCNGC 4 cut(s) 72, 75, 78, 186
PleI GAGTC 1 cut(s) 239
PpsI GAGTC 1 cut(s) 239
PspN4I GGNNCC 2 cut(s) 63, 192
PspPI GGNCC 2 cut(s) 61, 214
RruI TCGCGA 1 cut(s) 110
SatI GCNGC 4 cut(s) 71, 74, 77, 185
Sau96I GGNCC 2 cut(s) 61, 214
SchI GAGTC 1 cut(s) 239
SetI ASST 9 cut(s) 12, 22, 34, 49, 120, 124, 152, 168, 183
SfuI TTCGAA 1 cut(s) 13
SinI GGWCC 2 cut(s) 61, 214
SsiI CCGC 6 cut(s) 25, 68, 71, 74, 77, 217
SspMI CTAG 1 cut(s) 39
TaaI ACNGT 1 cut(s) 106
TaqI TCGA 2 cut(s) 13, 88
TauI GCSGC 3 cut(s) 73, 76, 79
TfiI GAWTC 1 cut(s) 251
TseI GCWGC 1 cut(s) 184
TspGWI ACGGA 1 cut(s) 72
VpaK11BI GGWCC 2 cut(s) 61, 214
XspI CTAG 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.