Rmu_co8152390.1_g000001

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8152390.1
N/A
Physical Location & Seq
Reverse (-)
2 .. 640
639 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8152390.1_g000001.1.cds

Sequence Viewer

Length: 267 bp
atggtcacaaggaacataatgaagctttcagacatcaacttgaggtcaattagtccagccattggtgacttgctggatcttaaaacactggatttgcataacacttcgcttaccggtgaactacagaatctgggtagcttgacgcgtcttgagaaactgaatatgagcttcaatcagttaacttcctttggaactgagttggacagcttggttagccttcaaattctggacttgcaaaacaatactttacagggaatggttccggat
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

89

Amino Acids

9.84

Weight (kDa)

4.64

Isoelectric Point (pI)

51.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 62
AccII CGCG 1 cut(s) 145
AccIII TCCGGA 1 cut(s) 262
AclWI GGATC 1 cut(s) 84
AcsI RAATTY 1 cut(s) 222
AfiI CCNNNNNNNGG 1 cut(s) 62
AflIII ACRYGT 1 cut(s) 143
AgeI ACCGGT 1 cut(s) 113
AgsI TTSAA 2 cut(s) 172, 221
AluBI AGCT 4 cut(s) 25, 138, 168, 207
AluI AGCT 4 cut(s) 25, 138, 168, 207
AlwI GGATC 1 cut(s) 84
AlwNI CAGNNNCTG 1 cut(s) 130
Aor13HI TCCGGA 1 cut(s) 262
ApoI RAATTY 1 cut(s) 222
AsiGI ACCGGT 1 cut(s) 113
AsuHPI GGTGA 2 cut(s) 77, 128
BfmI CTRYAG 1 cut(s) 122
BmiI GGNNCC 1 cut(s) 261
BpuEI CTTGAG 2 cut(s) 61, 170
BsaWI WCCGGW 2 cut(s) 113, 262
Bsc4I CCNNNNNNNGG 1 cut(s) 62
Bse118I RCCGGY 1 cut(s) 113
Bse1I ACTGG 1 cut(s) 93
BseAI TCCGGA 1 cut(s) 262
BseLI CCNNNNNNNGG 1 cut(s) 62
BseMII CTCAG 1 cut(s) 186
BseNI ACTGG 1 cut(s) 93
Bsh1236I CGCG 1 cut(s) 145
BshTI ACCGGT 1 cut(s) 113
BsiSI CCGG 2 cut(s) 114, 263
BslI CCNNNNNNNGG 1 cut(s) 62
Bsp13I TCCGGA 1 cut(s) 262
Bsp143I GATC 1 cut(s) 76
BspCNI CTCAG 1 cut(s) 187
BspEI TCCGGA 1 cut(s) 262
BspFNI CGCG 1 cut(s) 145
BspLI GGNNCC 1 cut(s) 261
BspPI GGATC 1 cut(s) 84
BsrFI RCCGGY 1 cut(s) 113
BsrI ACTGG 1 cut(s) 93
BssAI RCCGGY 1 cut(s) 113
BssMI GATC 1 cut(s) 76
BstDEI CTNAG 1 cut(s) 195
BstFNI CGCG 1 cut(s) 145
BstKTI GATC 1 cut(s) 79
BstMBI GATC 1 cut(s) 76
BstMWI GCNNNNNNNGC 1 cut(s) 213
BstSFI CTRYAG 1 cut(s) 122
BstUI CGCG 1 cut(s) 145
BstX2I RGATCY 1 cut(s) 76
BstYI RGATCY 1 cut(s) 76
BtsIMutI CAGTG 1 cut(s) 86
CaiI CAGNNNCTG 1 cut(s) 130
Cfr10I RCCGGY 1 cut(s) 113
CseI GACGC 2 cut(s) 134, 151
CspAI ACCGGT 1 cut(s) 113
CviJI RGCY 6 cut(s) 25, 59, 138, 168, 207, 216
CviKI_1 RGCY 6 cut(s) 25, 59, 138, 168, 207, 216
DdeI CTNAG 1 cut(s) 195
DpnI GATC 1 cut(s) 78
DpnII GATC 1 cut(s) 76
FaiI YATR 3 cut(s) 17, 99, 164
HapII CCGG 2 cut(s) 114, 263
HgaI GACGC 2 cut(s) 134, 151
HincII GTYRAC 1 cut(s) 180
HindII GTYRAC 1 cut(s) 180
HindIII AAGCTT 1 cut(s) 23
HinfI GANTC 1 cut(s) 127
HpaI GTTAAC 1 cut(s) 180
HpaII CCGG 2 cut(s) 114, 263
HphI GGTGA 2 cut(s) 77, 128
Hpy166II GTNNAC 2 cut(s) 119, 180
Hpy188I TCNGA 1 cut(s) 31
Hpy188III TCNNGA 3 cut(s) 149, 227, 263
Hpy8I GTNNAC 2 cut(s) 119, 180
HpyAV CCTTC 1 cut(s) 227
HpyCH4V TGCA 2 cut(s) 97, 235
HpyF10VI GCNNNNNNNGC 1 cut(s) 213
HpyF3I CTNAG 1 cut(s) 195
Kpn2I TCCGGA 1 cut(s) 262
KspAI GTTAAC 1 cut(s) 180
Kzo9I GATC 1 cut(s) 76
LpnPI CCDG 7 cut(s) 59, 69, 74, 116, 127, 212, 236
MaeIII GTNAC 2 cut(s) 4, 65
MalI GATC 1 cut(s) 78
MboI GATC 1 cut(s) 76
MflI RGATCY 1 cut(s) 76
MluCI AATT 2 cut(s) 48, 222
MluI ACGCGT 1 cut(s) 143
MmeI TCCRAC 1 cut(s) 180
MnlI CCTC 1 cut(s) 36
MroI TCCGGA 1 cut(s) 262
MseI TTAA 2 cut(s) 81, 179
MspI CCGG 2 cut(s) 114, 263
MvnI CGCG 1 cut(s) 145
MwoI GCNNNNNNNGC 1 cut(s) 213
NdeII GATC 1 cut(s) 76
NlaIV GGNNCC 1 cut(s) 261
NmuCI GTSAC 2 cut(s) 4, 65
PfeI GAWTC 1 cut(s) 127
PflMI CCANNNNNTGG 1 cut(s) 62
PinAI ACCGGT 1 cut(s) 113
PspN4I GGNNCC 1 cut(s) 261
PstNI CAGNNNCTG 1 cut(s) 130
PsuI RGATCY 1 cut(s) 76
SaqAI TTAA 2 cut(s) 81, 179
Sau3AI GATC 1 cut(s) 76
SetI ASST 5 cut(s) 27, 47, 140, 170, 209
SfcI CTRYAG 1 cut(s) 122
SmlI CTYRAG 2 cut(s) 40, 149
SmoI CTYRAG 2 cut(s) 40, 149
Sse9I AATT 2 cut(s) 48, 222
TasI AATT 2 cut(s) 48, 222
TfiI GAWTC 1 cut(s) 127
Tru1I TTAA 2 cut(s) 81, 179
Tru9I TTAA 2 cut(s) 81, 179
TscAI CASTG 1 cut(s) 93
TseFI GTSAC 2 cut(s) 4, 65
Tsp45I GTSAC 2 cut(s) 4, 65
TspDTI ATGAA 1 cut(s) 35
TspRI CASTG 1 cut(s) 93
Van91I CCANNNNNTGG 1 cut(s) 62
XapI RAATTY 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.