Rmu_co8154356.1_g000001

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8154356.1
N/A
Physical Location & Seq
Forward (+)
488 .. 655
168 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8154356.1_g000001.1.cds

Sequence Viewer

Length: 168 bp
atggcggttcatcacgaagaacccacatcgacttcaagaaagctccacttccctcttgactcctccgcctaccaaatcctaggcgagatcggctccggcgtcagcgccgtcgtatacaaagccctatgcccctccgtcaactccgccgtggtcgccatcaagtccatc

Protein Analysis

56

Amino Acids

5.9

Weight (kDa)

6.81

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 114
AciI CCGC 3 cut(s) 5, 66, 144
AcyI GRCGYC 1 cut(s) 99
AgsI TTSAA 1 cut(s) 36
AluBI AGCT 1 cut(s) 43
AluI AGCT 1 cut(s) 43
AspA2I CCTAGG 1 cut(s) 79
AspLEI GCGC 1 cut(s) 107
AvrII CCTAGG 1 cut(s) 79
BccI CCATC 1 cut(s) 164
BceAI ACGGC 2 cut(s) 92, 131
BfaI CTAG 1 cut(s) 80
BfoI RGCGCY 1 cut(s) 108
BlnI CCTAGG 1 cut(s) 79
BmiI GGNNCC 1 cut(s) 94
BplI GAGNNNNNCTC 2 cut(s) 77, 109
BsaHI GRCGYC 1 cut(s) 99
BsaJI CCNNGG 2 cut(s) 79, 147
BseDI CCNNGG 2 cut(s) 79, 147
BseRI GAGGAG 1 cut(s) 52
BsiSI CCGG 1 cut(s) 96
Bsp143I GATC 1 cut(s) 87
BspACI CCGC 3 cut(s) 5, 66, 144
BspLI GGNNCC 1 cut(s) 94
BssECI CCNNGG 2 cut(s) 79, 147
BssMI GATC 1 cut(s) 87
BssNAI GTATAC 1 cut(s) 115
BssNI GRCGYC 1 cut(s) 99
BssT1I CCWWGG 1 cut(s) 79
Bst1107I GTATAC 1 cut(s) 115
BstACI GRCGYC 1 cut(s) 99
BstDSI CCRYGG 1 cut(s) 147
BstH2I RGCGCY 1 cut(s) 108
BstHHI GCGC 1 cut(s) 107
BstKTI GATC 1 cut(s) 90
BstMBI GATC 1 cut(s) 87
BstMWI GCNNNNNNNGC 2 cut(s) 90, 152
BstZ17I GTATAC 1 cut(s) 115
BtgI CCRYGG 1 cut(s) 147
CfoI GCGC 1 cut(s) 107
CseI GACGC 1 cut(s) 88
CviJI RGCY 3 cut(s) 43, 93, 122
CviKI_1 RGCY 3 cut(s) 43, 93, 122
DpnI GATC 1 cut(s) 89
DpnII GATC 1 cut(s) 87
EciI GGCGGA 2 cut(s) 55, 133
Eco130I CCWWGG 1 cut(s) 79
EcoT14I CCWWGG 1 cut(s) 79
ErhI CCWWGG 1 cut(s) 79
FaiI YATR 2 cut(s) 115, 127
FalI AAGNNNNNCTT 2 cut(s) 32, 64
FblI GTMKAC 1 cut(s) 114
FspBI CTAG 1 cut(s) 80
GlaI GCGC 1 cut(s) 106
HaeII RGCGCY 1 cut(s) 108
HapII CCGG 1 cut(s) 96
HgaI GACGC 1 cut(s) 88
HhaI GCGC 1 cut(s) 107
Hin1I GRCGYC 1 cut(s) 99
Hin6I GCGC 1 cut(s) 105
HinP1I GCGC 1 cut(s) 105
HincII GTYRAC 1 cut(s) 139
HindII GTYRAC 1 cut(s) 139
HinfI GANTC 1 cut(s) 59
HpaII CCGG 1 cut(s) 96
Hpy166II GTNNAC 2 cut(s) 115, 139
Hpy188III TCNNGA 3 cut(s) 14, 36, 56
Hpy8I GTNNAC 2 cut(s) 115, 139
Hpy99I CGWCG 1 cut(s) 113
HpyF10VI GCNNNNNNNGC 2 cut(s) 90, 152
Hsp92I GRCGYC 1 cut(s) 99
HspAI GCGC 1 cut(s) 105
Kzo9I GATC 1 cut(s) 87
LmnI GCTCC 2 cut(s) 48, 98
LpnPI CCDG 1 cut(s) 109
MaeI CTAG 1 cut(s) 80
MalI GATC 1 cut(s) 89
MboI GATC 1 cut(s) 87
MboII GAAGA 1 cut(s) 29
MlyI GAGTC 1 cut(s) 53
MnlI CCTC 3 cut(s) 63, 73, 142
MspI CCGG 1 cut(s) 96
MwoI GCNNNNNNNGC 2 cut(s) 90, 152
NdeII GATC 1 cut(s) 87
NlaIV GGNNCC 1 cut(s) 94
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PleI GAGTC 1 cut(s) 53
PpsI GAGTC 1 cut(s) 53
PspN4I GGNNCC 1 cut(s) 94
Sau3AI GATC 1 cut(s) 87
SchI GAGTC 1 cut(s) 53
SetI ASST 1 cut(s) 45
SgeI CNNG 7 cut(s) 26, 48, 68, 92, 97, 108, 160
SsiI CCGC 3 cut(s) 5, 66, 144
SspMI CTAG 1 cut(s) 80
StyI CCWWGG 1 cut(s) 79
TaqI TCGA 1 cut(s) 29
TspGWI ACGGA 1 cut(s) 124
XmaJI CCTAGG 1 cut(s) 79
XmiI GTMKAC 1 cut(s) 114
XspI CTAG 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.