Rmu_co8181704.1_g000001

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8181704.1
N/A
Physical Location & Seq
Reverse (-)
1 .. 449
449 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8181704.1_g000001.1.cds

Sequence Viewer

Length: 429 bp
atgggatgcatttgctccaaagggcttttagccaatcaatatgttttgaagaatcatcgtagggacaaagaattaaaatcaaataagttgtcgaaggaattagatggagcagccgtcggggtagatgctggtggaaatgatgcaactacacggttgataaccaatcatcgcaccgaggacaatgcagggtcgactcccatttcatcagatgaaggggagaagaagattggggttggggttggggttaccaaagcaggggcaagtgctccgagattcccatctgggctaaataggataactagcataacacatggagaaagaggagcacaagttgttgctggatggccttcttggctcactgcagtggcaggagaagcaatcagtgggtgggtgcctcgcaaggcagattcatttgaaaaactggacaag

Protein Analysis

143

Amino Acids

15.03

Weight (kDa)

9.2

Isoelectric Point (pI)

12.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 391
AccI GTMKAC 1 cut(s) 191
AfiI CCNNNNNNNGG 1 cut(s) 255
AgsI TTSAA 2 cut(s) 49, 416
AleI CACNNNNGTG 1 cut(s) 362
Alw21I GWGCWC 2 cut(s) 268, 328
AoxI GGCC 1 cut(s) 344
ApeKI GCWGC 1 cut(s) 110
ArsI GACNNNNNNTTYG 2 cut(s) 74, 106
BanI GGYRCC 1 cut(s) 391
Bbv12I GWGCWC 2 cut(s) 268, 328
BbvI GCAGC 1 cut(s) 122
BccI CCATC 3 cut(s) 98, 286, 336
BceAI ACGGC 1 cut(s) 98
BcgI CGANNNNNNTGC 2 cut(s) 164, 198
BfaI CTAG 1 cut(s) 300
BfmI CTRYAG 1 cut(s) 360
BglI GCCNNNNNGGC 1 cut(s) 352
BisI GCNGC 1 cut(s) 111
BlsI GCNGC 1 cut(s) 112
BmiI GGNNCC 1 cut(s) 393
BmsI GCATC 2 cut(s) 115, 130
BsaBI GATNNNNATC 1 cut(s) 277
BsaJI CCNNGG 1 cut(s) 174
BsaXI ACNNNNNCTCC 4 cut(s) 99, 129, 315, 345
Bsc4I CCNNNNNNNGG 1 cut(s) 255
Bse1I ACTGG 1 cut(s) 426
Bse8I GATNNNNATC 1 cut(s) 277
BseDI CCNNGG 1 cut(s) 174
BseGI GGATG 2 cut(s) 11, 347
BseJI GATNNNNATC 1 cut(s) 277
BseLI CCNNNNNNNGG 1 cut(s) 255
BseNI ACTGG 1 cut(s) 426
BseRI GAGGAG 1 cut(s) 336
BseXI GCAGC 1 cut(s) 122
BshFI GGCC 1 cut(s) 346
BshNI GGYRCC 1 cut(s) 391
BsiHKAI GWGCWC 2 cut(s) 268, 328
BslFI GGGAC 1 cut(s) 77
BslI CCNNNNNNNGG 1 cut(s) 255
BsmFI GGGAC 1 cut(s) 77
BsnI GGCC 1 cut(s) 346
Bsp1286I GDGCHC 2 cut(s) 268, 328
BspANI GGCC 1 cut(s) 346
BspLI GGNNCC 1 cut(s) 393
BspMAI CTGCAG 1 cut(s) 364
BspT107I GGYRCC 1 cut(s) 391
BsrI ACTGG 1 cut(s) 426
BssECI CCNNGG 1 cut(s) 174
Bst4CI ACNGT 1 cut(s) 153
BstEII GGTNACC 1 cut(s) 244
BstF5I GGATG 2 cut(s) 11, 347
BstMWI GCNNNNNNNGC 2 cut(s) 352, 374
BstPI GGTNACC 1 cut(s) 244
BstSFI CTRYAG 1 cut(s) 360
BstV1I GCAGC 1 cut(s) 122
BsuRI GGCC 1 cut(s) 346
BtgZI GCGATG 1 cut(s) 152
BtsCI GGATG 2 cut(s) 11, 347
BtsI GCAGTG 2 cut(s) 357, 369
BtsIMutI CAGTG 3 cut(s) 357, 369, 388
CviAII CATG 1 cut(s) 311
CviJI RGCY 6 cut(s) 25, 32, 113, 286, 346, 355
CviKI_1 RGCY 6 cut(s) 25, 32, 113, 286, 346, 355
Eco91I GGTNACC 1 cut(s) 244
EcoO65I GGTNACC 1 cut(s) 244
EcoT22I ATGCAT 1 cut(s) 11
FaeI CATG 1 cut(s) 314
FaiI YATR 3 cut(s) 42, 305, 312
FaqI GGGAC 1 cut(s) 77
FatI CATG 1 cut(s) 310
FblI GTMKAC 1 cut(s) 191
Fnu4HI GCNGC 1 cut(s) 111
FokI GGATG 2 cut(s) 18, 354
Fsp4HI GCNGC 1 cut(s) 111
FspBI CTAG 1 cut(s) 300
GluI GCNGC 1 cut(s) 111
HaeIII GGCC 1 cut(s) 346
Hin1II CATG 1 cut(s) 314
HincII GTYRAC 1 cut(s) 192
HindII GTYRAC 1 cut(s) 192
HinfI GANTC 4 cut(s) 52, 193, 273, 407
Hpy166II GTNNAC 1 cut(s) 192
Hpy188I TCNGA 2 cut(s) 208, 270
Hpy8I GTNNAC 1 cut(s) 192
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 3 cut(s) 88, 206, 357
HpyCH4III ACNGT 1 cut(s) 153
HpyCH4V TGCA 4 cut(s) 9, 143, 185, 362
HpyF10VI GCNNNNNNNGC 2 cut(s) 352, 374
Hsp92II CATG 1 cut(s) 314
LmnI GCTCC 4 cut(s) 20, 107, 271, 323
LpnPI CCDG 7 cut(s) 114, 171, 240, 267, 324, 354, 407
Lsp1109I GCAGC 1 cut(s) 122
LweI GCATC 2 cut(s) 115, 130
MaeI CTAG 1 cut(s) 300
MaeIII GTNAC 1 cut(s) 244
MboII GAAGA 3 cut(s) 61, 232, 235
MhlI GDGCHC 2 cut(s) 268, 328
MluCI AATT 2 cut(s) 71, 98
MlyI GAGTC 1 cut(s) 187
MnlI CCTC 3 cut(s) 169, 314, 405
Mph1103I ATGCAT 1 cut(s) 11
MseI TTAA 1 cut(s) 74
MslI CAYNNNNRTG 1 cut(s) 362
MwoI GCNNNNNNNGC 2 cut(s) 352, 374
NlaIII CATG 1 cut(s) 314
NlaIV GGNNCC 1 cut(s) 393
NsiI ATGCAT 1 cut(s) 11
OliI CACNNNNGTG 1 cut(s) 362
PfeI GAWTC 3 cut(s) 52, 273, 407
PkrI GCNGC 1 cut(s) 112
PleI GAGTC 1 cut(s) 187
PpsI GAGTC 1 cut(s) 187
PspEI GGTNACC 1 cut(s) 244
PspN4I GGNNCC 1 cut(s) 393
PstI CTGCAG 1 cut(s) 364
RseI CAYNNNNRTG 1 cut(s) 362
SalI GTCGAC 1 cut(s) 190
SaqAI TTAA 1 cut(s) 74
SatI GCNGC 1 cut(s) 111
SchI GAGTC 1 cut(s) 187
SduI GDGCHC 2 cut(s) 268, 328
SfaNI GCATC 2 cut(s) 115, 130
SfcI CTRYAG 1 cut(s) 360
SmiMI CAYNNNNRTG 1 cut(s) 362
Sse9I AATT 2 cut(s) 71, 98
SspMI CTAG 1 cut(s) 300
TaaI ACNGT 1 cut(s) 153
TaqI TCGA 2 cut(s) 92, 191
TasI AATT 2 cut(s) 71, 98
TfiI GAWTC 3 cut(s) 52, 273, 407
Tru1I TTAA 1 cut(s) 74
Tru9I TTAA 1 cut(s) 74
TscAI CASTG 3 cut(s) 364, 369, 388
TseI GCWGC 1 cut(s) 110
TspDTI ATGAA 3 cut(s) 192, 225, 399
TspRI CASTG 3 cut(s) 364, 369, 388
XmiI GTMKAC 1 cut(s) 191
XspI CTAG 1 cut(s) 300
Zsp2I ATGCAT 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.