Rmu_co8296921.1_g000001

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8296921.1
N/A
Physical Location & Seq
Forward (+)
497 .. 885
389 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8296921.1_g000001.1.cds

Sequence Viewer

Length: 389 bp
atggcaactttagtggagcctccgaatggaatcaggcaacgggggaagcaatattactcaatgtggcaaacgttgttcgaggttgattccaagtatgttccgatcaaacccatagggagaggagcatatggtgtagtctgctcgtccatcaacagggaaacgaatgagaaagttgcaatcaagaagatcaataacgtgtttgagaaccgcattgatgcattgaggacactgagggagttgaagctacttagaaatatccagcacgagaatgtgattgctttgaaggatgttatgatgcctatccacaggacaagtttcaaggacgtgtattttgtgtacgagctcatggatactgatcttcaccaaattataaagtcttcacagccact

Protein Analysis

130

Amino Acids

15.17

Weight (kDa)

9.41

Isoelectric Point (pI)

22.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 371
AciI CCGC 1 cut(s) 208
AclI AACGTT 1 cut(s) 71
AfaI GTAC 1 cut(s) 338
AfiI CCNNNNNNNGG 2 cut(s) 26, 153
AflIII ACRYGT 2 cut(s) 195, 324
AgsI TTSAA 3 cut(s) 241, 283, 319
AjiI CACGTC 1 cut(s) 325
AluBI AGCT 2 cut(s) 244, 343
AluI AGCT 2 cut(s) 244, 343
Alw21I GWGCWC 1 cut(s) 345
ArsI GACNNNNNNTTYG 2 cut(s) 314, 346
AsuHPI GGTGA 1 cut(s) 353
BanII GRGCYC 1 cut(s) 345
BarI GAAGNNNNNNTAC 2 cut(s) 38, 70
BauI CACGAG 1 cut(s) 263
BbsI GAAGAC 1 cut(s) 369
Bbv12I GWGCWC 1 cut(s) 345
BccI CCATC 1 cut(s) 155
BciVI GTATCC 1 cut(s) 343
BfuI GTATCC 1 cut(s) 343
BmgBI CACGTC 1 cut(s) 325
BmiI GGNNCC 1 cut(s) 18
BmsI GCATC 2 cut(s) 205, 285
BpiI GAAGAC 1 cut(s) 369
BsaBI GATNNNNATC 2 cut(s) 299, 354
Bsc4I CCNNNNNNNGG 2 cut(s) 26, 153
Bse8I GATNNNNATC 2 cut(s) 299, 354
BseGI GGATG 1 cut(s) 292
BseJI GATNNNNATC 2 cut(s) 299, 354
BseLI CCNNNNNNNGG 2 cut(s) 26, 153
BseMII CTCAG 1 cut(s) 221
BseRI GAGGAG 1 cut(s) 135
BsiHKAI GWGCWC 1 cut(s) 345
BslI CCNNNNNNNGG 2 cut(s) 26, 153
Bsp1286I GDGCHC 1 cut(s) 345
Bsp143I GATC 3 cut(s) 102, 186, 355
BspACI CCGC 1 cut(s) 208
BspCNI CTCAG 1 cut(s) 222
BspLI GGNNCC 1 cut(s) 18
BssMI GATC 3 cut(s) 102, 186, 355
BssSI CACGAG 1 cut(s) 263
Bst2BI CACGAG 1 cut(s) 263
BstDEI CTNAG 2 cut(s) 230, 248
BstF5I GGATG 1 cut(s) 292
BstKTI GATC 3 cut(s) 105, 189, 358
BstMBI GATC 3 cut(s) 102, 186, 355
BstV2I GAAGAC 1 cut(s) 369
BsuI GTATCC 1 cut(s) 343
BtrI CACGTC 1 cut(s) 325
BtsCI GGATG 1 cut(s) 292
BtsIMutI CAGTG 1 cut(s) 227
Csp6I GTAC 1 cut(s) 337
CspCI CAANNNNNGTGG 1 cut(s) 29
CviAII CATG 1 cut(s) 346
CviJI RGCY 4 cut(s) 19, 244, 343, 385
CviKI_1 RGCY 4 cut(s) 19, 244, 343, 385
CviQI GTAC 1 cut(s) 337
DdeI CTNAG 2 cut(s) 230, 248
DpnI GATC 3 cut(s) 104, 188, 357
DpnII GATC 3 cut(s) 102, 186, 355
Ecl136II GAGCTC 1 cut(s) 343
Eco24I GRGCYC 1 cut(s) 345
Eco53kI GAGCTC 1 cut(s) 343
EcoICRI GAGCTC 1 cut(s) 343
EcoT22I ATGCAT 1 cut(s) 220
EcoT38I GRGCYC 1 cut(s) 345
FaeI CATG 1 cut(s) 349
FaiI YATR 7 cut(s) 96, 113, 127, 129, 293, 347, 371
FatI CATG 1 cut(s) 345
FauNDI CATATG 1 cut(s) 127
FokI GGATG 1 cut(s) 299
FriOI GRGCYC 1 cut(s) 345
Hin1II CATG 1 cut(s) 349
HinfI GANTC 2 cut(s) 30, 86
HphI GGTGA 1 cut(s) 353
Hpy166II GTNNAC 1 cut(s) 337
Hpy188I TCNGA 2 cut(s) 24, 102
Hpy188III TCNNGA 1 cut(s) 181
Hpy8I GTNNAC 1 cut(s) 337
HpyAV CCTTC 1 cut(s) 277
HpyCH4IV ACGT 3 cut(s) 71, 195, 324
HpyCH4V TGCA 2 cut(s) 176, 218
HpyF3I CTNAG 2 cut(s) 230, 248
HpySE526I ACGT 3 cut(s) 71, 195, 324
Hsp92II CATG 1 cut(s) 349
Kzo9I GATC 3 cut(s) 102, 186, 355
LmnI GCTCC 2 cut(s) 16, 122
LpnPI CCDG 4 cut(s) 19, 139, 272, 292
LweI GCATC 2 cut(s) 205, 285
MaeII ACGT 3 cut(s) 71, 195, 324
MalI GATC 3 cut(s) 104, 188, 357
MboI GATC 3 cut(s) 102, 186, 355
MboII GAAGA 3 cut(s) 196, 350, 369
MhlI GDGCHC 1 cut(s) 345
MluCI AATT 1 cut(s) 366
MnlI CCTC 5 cut(s) 30, 73, 113, 216, 225
Mph1103I ATGCAT 1 cut(s) 220
MslI CAYNNNNRTG 1 cut(s) 267
NdeI CATATG 1 cut(s) 127
NdeII GATC 3 cut(s) 102, 186, 355
NlaIII CATG 1 cut(s) 349
NlaIV GGNNCC 1 cut(s) 18
NsiI ATGCAT 1 cut(s) 220
PfeI GAWTC 2 cut(s) 30, 86
PsiI TTATAA 1 cut(s) 371
Psp124BI GAGCTC 1 cut(s) 345
Psp1406I AACGTT 1 cut(s) 71
PspN4I GGNNCC 1 cut(s) 18
RsaI GTAC 1 cut(s) 338
RsaNI GTAC 1 cut(s) 337
RseI CAYNNNNRTG 1 cut(s) 267
SacI GAGCTC 1 cut(s) 345
Sau3AI GATC 3 cut(s) 102, 186, 355
SduI GDGCHC 1 cut(s) 345
SetI ASST 6 cut(s) 74, 84, 198, 246, 327, 345
SfaNI GCATC 2 cut(s) 205, 285
SmiMI CAYNNNNRTG 1 cut(s) 267
Sse9I AATT 1 cut(s) 366
SsiI CCGC 1 cut(s) 208
SspI AATATT 1 cut(s) 53
SstI GAGCTC 1 cut(s) 345
TaiI ACGT 3 cut(s) 74, 198, 327
TaqI TCGA 1 cut(s) 78
TasI AATT 1 cut(s) 366
TfiI GAWTC 2 cut(s) 30, 86
TscAI CASTG 1 cut(s) 234
TspRI CASTG 1 cut(s) 234
Zsp2I ATGCAT 1 cut(s) 220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.