Rmu_co8316191.1_g000001
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8316191.1
N/A
Physical Location & Seq
Forward (+)
176 .. 933
758 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8316191.1_g000001.1.cds

Sequence Viewer

Length: 758 bp
atgaaggattccactatttactcactcttcttcttcttcttcttcttcttctgttttggcgacttcgctgagtctttgactcccgacggactctccctcctctccctcaaatccgccgtcgaccagtccaccgccggctccgccttctccgactgggccgactccgacgcctcgccctgccgatggaccggcatttcctgcatgaacatcaccggattccccgacccccgcgtcgtcgggatcgcgctctccggcaagaatctccggggctacatcccctccgagctcggaaacttagtctatctgcggcggctcaacctccacagcaacaacttctacggcgctataccaactcagctcttcaatgccacgtcactccacagcctcttcctctacggtaacaacctctccggtcagctcccgccctcgatctgtaacctcccgcgcctccagaacctcgacctctccaacaactccctctccggttcgttagacaagggcctcaacaactgtaagcaattgcagagactgatactcgccggaaaccatttcaccggcgaaatcccggcgggaatttggtccggtatggaaaacctcctccaattggacctctccgacaacggtttcaccggatcggtgccggaagatttcggcgacctgaagtctctctccggcacgctcaacctctcgttcaatcacttctccggccggattccgaaatcgctgggagacttaccggtgacggtgagcttcgatct
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

253

Amino Acids

27.53

Weight (kDa)

5.06

Isoelectric Point (pI)

28.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 230
AccB1I GGYRCC 1 cut(s) 637
AccI GTMKAC 1 cut(s) 120
AccII CGCG 3 cut(s) 231, 245, 445
AciI CCGC 9 cut(s) 114, 132, 141, 229, 307, 310, 422, 443, 569
AclWI GGATC 2 cut(s) 248, 640
AcoI YGGCCR 1 cut(s) 706
AcsI RAATTY 1 cut(s) 573
AcuI CTGAAG 1 cut(s) 680
AcyI GRCGYC 1 cut(s) 168
AfiI CCNNNNNNNGG 2 cut(s) 183, 604
AgeI ACCGGT 1 cut(s) 736
AgsI TTSAA 2 cut(s) 364, 694
AhdI GACNNNNNGTC 1 cut(s) 661
AjiI CACGTC 1 cut(s) 372
AluBI AGCT 4 cut(s) 286, 358, 418, 750
AluI AGCT 4 cut(s) 286, 358, 418, 750
Alw21I GWGCWC 1 cut(s) 288
Alw26I GTCTC 3 cut(s) 520, 669, 723
AlwI GGATC 2 cut(s) 248, 640
AlwNI CAGNNNCTG 1 cut(s) 529
AoxI GGCC 3 cut(s) 156, 499, 706
ApoI RAATTY 1 cut(s) 573
ArsI GACNNNNNNTTYG 2 cut(s) 102, 134
AsiGI ACCGGT 1 cut(s) 736
AspLEI GCGC 3 cut(s) 247, 344, 447
AspS9I GGNCC 5 cut(s) 156, 186, 499, 579, 607
AsuC2I CCSGG 2 cut(s) 266, 566
AsuHPI GGTGA 5 cut(s) 202, 544, 619, 751, 757
AvaII GGWCC 3 cut(s) 186, 579, 607
BanI GGYRCC 1 cut(s) 637
BanII GRGCYC 1 cut(s) 288
Bbv12I GWGCWC 1 cut(s) 288
BccI CCATC 1 cut(s) 177
BceAI ACGGC 2 cut(s) 101, 355
BcnI CCSGG 2 cut(s) 266, 566
BcoDI GTCTC 3 cut(s) 520, 669, 723
BfoI RGCGCY 1 cut(s) 345
BisI GCNGC 2 cut(s) 308, 311
BlsI GCNGC 2 cut(s) 309, 312
Bme1390I CCNGG 2 cut(s) 266, 566
Bme18I GGWCC 3 cut(s) 186, 579, 607
BmeRI GACNNNNNGTC 1 cut(s) 661
BmgBI CACGTC 1 cut(s) 372
BmgT120I GGNCC 5 cut(s) 156, 186, 499, 579, 607
BmiI GGNNCC 2 cut(s) 139, 639
BmrFI CCNGG 2 cut(s) 266, 566
BmrI ACTGGG 1 cut(s) 163
BmuI ACTGGG 1 cut(s) 163
BpmI CTGGAG 1 cut(s) 434
BpuMI CCSGG 2 cut(s) 266, 566
BsaHI GRCGYC 1 cut(s) 168
BsaJI CCNNGG 1 cut(s) 265
BsaWI WCCGGW 6 cut(s) 212, 410, 482, 581, 629, 736
Bsc4I CCNNNNNNNGG 2 cut(s) 183, 604
Bse118I RCCGGY 4 cut(s) 134, 188, 554, 736
Bse1I ACTGG 2 cut(s) 124, 158
BseDI CCNNGG 1 cut(s) 265
BseGI GGATG 1 cut(s) 273
BseLI CCNNNNNNNGG 2 cut(s) 183, 604
BseMII CTCAG 2 cut(s) 60, 368
BseNI ACTGG 2 cut(s) 124, 158
BseRI GAGGAG 2 cut(s) 89, 587
BseX3I CGGCCG 1 cut(s) 706
BseYI CCCAGC 1 cut(s) 724
Bsh1236I CGCG 3 cut(s) 231, 245, 445
Bsh1285I CGRYCG 1 cut(s) 709
BshFI GGCC 3 cut(s) 158, 501, 708
BshNI GGYRCC 1 cut(s) 637
BshTI ACCGGT 1 cut(s) 736
BsiEI CGRYCG 1 cut(s) 709
BsiHKAI GWGCWC 1 cut(s) 288
BslI CCNNNNNNNGG 2 cut(s) 183, 604
BsmAI GTCTC 3 cut(s) 520, 669, 723
BsnI GGCC 3 cut(s) 158, 501, 708
Bsp1286I GDGCHC 1 cut(s) 288
Bsp143I GATC 4 cut(s) 240, 429, 632, 754
BspACI CCGC 9 cut(s) 114, 132, 141, 229, 307, 310, 422, 443, 569
BspANI GGCC 3 cut(s) 158, 501, 708
BspCNI CTCAG 2 cut(s) 61, 367
BspFNI CGCG 3 cut(s) 231, 245, 445
BspLI GGNNCC 2 cut(s) 139, 639
BspPI GGATC 2 cut(s) 248, 640
BspQI GCTCTTC 1 cut(s) 365
BspT107I GGYRCC 1 cut(s) 637
BsrFI RCCGGY 4 cut(s) 134, 188, 554, 736
BsrI ACTGG 2 cut(s) 124, 158
BssAI RCCGGY 4 cut(s) 134, 188, 554, 736
BssECI CCNNGG 1 cut(s) 265
BssMI GATC 4 cut(s) 240, 429, 632, 754
BssNI GRCGYC 1 cut(s) 168
Bst4CI ACNGT 4 cut(s) 398, 512, 623, 745
Bst6I CTCTTC 3 cut(s) 32, 365, 392
BstACI GRCGYC 1 cut(s) 168
BstAPI GCANNNNNTGC 1 cut(s) 198
BstC8I GCNNGC 2 cut(s) 136, 677
BstDEI CTNAG 3 cut(s) 69, 295, 354
BstF5I GGATG 1 cut(s) 273
BstFNI CGCG 3 cut(s) 231, 245, 445
BstH2I RGCGCY 1 cut(s) 345
BstHHI GCGC 3 cut(s) 247, 344, 447
BstKTI GATC 4 cut(s) 243, 432, 635, 757
BstMAI GTCTC 3 cut(s) 520, 669, 723
BstMBI GATC 4 cut(s) 240, 429, 632, 754
BstMCI CGRYCG 1 cut(s) 709
BstMWI GCNNNNNNNGC 2 cut(s) 140, 198
BstSCI CCNGG 2 cut(s) 264, 564
BstUI CGCG 3 cut(s) 231, 245, 445
BstZI CGGCCG 1 cut(s) 706
BsuRI GGCC 3 cut(s) 158, 501, 708
BtrI CACGTC 1 cut(s) 372
BtsCI GGATG 1 cut(s) 273
Cac8I GCNNGC 2 cut(s) 136, 677
CaiI CAGNNNCTG 1 cut(s) 529
CfoI GCGC 3 cut(s) 247, 344, 447
Cfr10I RCCGGY 4 cut(s) 134, 188, 554, 736
Cfr13I GGNCC 5 cut(s) 156, 186, 499, 579, 607
CseI GACGC 2 cut(s) 176, 220
CspAI ACCGGT 1 cut(s) 736
CviAII CATG 1 cut(s) 202
DdeI CTNAG 3 cut(s) 69, 295, 354
DpnI GATC 4 cut(s) 242, 431, 634, 756
DpnII GATC 4 cut(s) 240, 429, 632, 754
DrdI GACNNNNNNGTC 1 cut(s) 230
DriI GACNNNNNGTC 1 cut(s) 661
DseDI GACNNNNNNGTC 1 cut(s) 230
EaeI YGGCCR 1 cut(s) 706
EagI CGGCCG 1 cut(s) 706
Eam1104I CTCTTC 3 cut(s) 32, 365, 392
Eam1105I GACNNNNNGTC 1 cut(s) 661
EarI CTCTTC 3 cut(s) 32, 365, 392
EciI GGCGGA 2 cut(s) 103, 130
Ecl136II GAGCTC 1 cut(s) 286
EclXI CGGCCG 1 cut(s) 706
Eco24I GRGCYC 1 cut(s) 288
Eco47I GGWCC 3 cut(s) 186, 579, 607
Eco52I CGGCCG 1 cut(s) 706
Eco53kI GAGCTC 1 cut(s) 286
Eco57I CTGAAG 1 cut(s) 680
EcoICRI GAGCTC 1 cut(s) 286
EcoO109I RGGNCCY 1 cut(s) 499
EcoT38I GRGCYC 1 cut(s) 288
FaeI CATG 1 cut(s) 205
FaiI YATR 3 cut(s) 203, 347, 587
FatI CATG 1 cut(s) 201
FauI CCCGC 4 cut(s) 236, 429, 450, 562
FblI GTMKAC 1 cut(s) 120
Fnu4HI GCNGC 2 cut(s) 308, 311
FokI GGATG 1 cut(s) 260
FriOI GRGCYC 1 cut(s) 288
Fsp4HI GCNGC 2 cut(s) 308, 311
GlaI GCGC 3 cut(s) 246, 343, 446
GluI GCNGC 2 cut(s) 308, 311
GsaI CCCAGC 1 cut(s) 728
GsuI CTGGAG 1 cut(s) 434
HaeII RGCGCY 1 cut(s) 345
HaeIII GGCC 3 cut(s) 158, 501, 708
HgaI GACGC 2 cut(s) 176, 220
HhaI GCGC 3 cut(s) 247, 344, 447
Hin1I GRCGYC 1 cut(s) 168
Hin1II CATG 1 cut(s) 205
Hin6I GCGC 3 cut(s) 245, 342, 445
HinP1I GCGC 3 cut(s) 245, 342, 445
HincII GTYRAC 1 cut(s) 121
HindII GTYRAC 1 cut(s) 121
HinfI GANTC 8 cut(s) 8, 71, 79, 90, 161, 216, 259, 712
HphI GGTGA 5 cut(s) 202, 544, 619, 751, 757
Hpy166II GTNNAC 2 cut(s) 121, 129
Hpy188I TCNGA 6 cut(s) 151, 166, 283, 290, 616, 717
Hpy188III TCNNGA 3 cut(s) 83, 238, 451
Hpy8I GTNNAC 2 cut(s) 121, 129
Hpy99I CGWCG 5 cut(s) 89, 122, 170, 236, 239
HpyAV CCTTC 1 cut(s) 154
HpyCH4III ACNGT 4 cut(s) 398, 512, 623, 745
HpyCH4IV ACGT 1 cut(s) 371
HpyCH4V TGCA 2 cut(s) 201, 523
HpyF10VI GCNNNNNNNGC 2 cut(s) 140, 198
HpyF3I CTNAG 3 cut(s) 69, 295, 354
HpySE526I ACGT 1 cut(s) 371
Hsp92I GRCGYC 1 cut(s) 168
Hsp92II CATG 1 cut(s) 205
HspAI GCGC 3 cut(s) 245, 342, 445
KroI GCCGGC 1 cut(s) 134
KroNI GCCGGC 1 cut(s) 136
Kzo9I GATC 4 cut(s) 240, 429, 632, 754
LguI GCTCTTC 1 cut(s) 365
LmnI GCTCC 2 cut(s) 143, 423
MaeII ACGT 1 cut(s) 371
MaeIII GTNAC 4 cut(s) 372, 398, 434, 739
MalI GATC 4 cut(s) 242, 431, 634, 756
MboI GATC 4 cut(s) 240, 429, 632, 754
MfeI CAATTG 2 cut(s) 518, 602
MhlI GDGCHC 1 cut(s) 288
MluCI AATT 3 cut(s) 518, 573, 602
MlyI GAGTC 4 cut(s) 73, 80, 84, 155
MmeI TCCRAC 4 cut(s) 174, 189, 492, 639
MroNI GCCGGC 1 cut(s) 134
MspR9I CCNGG 2 cut(s) 266, 566
MunI CAATTG 2 cut(s) 518, 602
MvnI CGCG 3 cut(s) 231, 245, 445
MwoI GCNNNNNNNGC 2 cut(s) 140, 198
NaeI GCCGGC 1 cut(s) 136
NciI CCSGG 2 cut(s) 266, 566
NdeII GATC 4 cut(s) 240, 429, 632, 754
NgoMIV GCCGGC 1 cut(s) 134
NlaIII CATG 1 cut(s) 205
NlaIV GGNNCC 2 cut(s) 139, 639
NmuCI GTSAC 2 cut(s) 372, 739
PciSI GCTCTTC 1 cut(s) 365
PdiI GCCGGC 1 cut(s) 136
PfeI GAWTC 4 cut(s) 8, 216, 259, 712
PinAI ACCGGT 1 cut(s) 736
PkrI GCNGC 2 cut(s) 309, 312
PleI GAGTC 4 cut(s) 73, 79, 84, 155
PpsI GAGTC 4 cut(s) 73, 79, 84, 155
Psp124BI GAGCTC 1 cut(s) 288
PspFI CCCAGC 1 cut(s) 724
PspN4I GGNNCC 2 cut(s) 139, 639
PspPI GGNCC 5 cut(s) 156, 186, 499, 579, 607
PstNI CAGNNNCTG 1 cut(s) 529
SacI GAGCTC 1 cut(s) 288
SalI GTCGAC 1 cut(s) 119
SapI GCTCTTC 1 cut(s) 365
SatI GCNGC 2 cut(s) 308, 311
Sau3AI GATC 4 cut(s) 240, 429, 632, 754
Sau96I GGNCC 5 cut(s) 156, 186, 499, 579, 607
SchI GAGTC 4 cut(s) 73, 80, 84, 155
ScrFI CCNGG 2 cut(s) 266, 566
SduI GDGCHC 1 cut(s) 288
SgrAI CRCCGGYG 1 cut(s) 554
SinI GGWCC 3 cut(s) 186, 579, 607
Sse9I AATT 3 cut(s) 518, 573, 602
SsiI CCGC 9 cut(s) 114, 132, 141, 229, 307, 310, 422, 443, 569
SstI GAGCTC 1 cut(s) 288
StyD4I CCNGG 2 cut(s) 264, 564
TaaI ACNGT 4 cut(s) 398, 512, 623, 745
TaiI ACGT 1 cut(s) 374
TaqI TCGA 4 cut(s) 120, 428, 459, 753
TasI AATT 3 cut(s) 518, 573, 602
TauI GCSGC 2 cut(s) 310, 313
TfiI GAWTC 4 cut(s) 8, 216, 259, 712
TseFI GTSAC 2 cut(s) 372, 739
Tsp45I GTSAC 2 cut(s) 372, 739
TspDTI ATGAA 2 cut(s) 17, 218
TspGWI ACGGA 1 cut(s) 102
VpaK11BI GGWCC 3 cut(s) 186, 579, 607
XapI RAATTY 1 cut(s) 573
XmiI GTMKAC 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.