Rmu_co8471695.1_g000001

Tubulin-specific chaperone

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8471695.1
N/A
Physical Location & Seq
Reverse (-)
1 .. 1559
1559 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8471695.1_g000001.1.cds

Sequence Viewer

Length: 466 bp
atgatctgtgaacagctgcctgatcttgttgccctcaatttatcttacaatttaatgtcacatgatattgttgggttgccacatttgaaaagcatccgtattttagtattaaacaatgttggcataaattggacacaggtagaagtactcaaacattcattgccagcaattgaggaactacatcttatggcgaatcatataagcacaatagagcctgcatcttcttcaacagttcagggatttgattatttgcggctactgaatttggacgacaattgtataactgattggaatgaaatcttgaaactttcacagctaccaagcttggagcagttgcatttggacaataacaatttgaaccatgtcttttatcctgatgttggcatgatgcttgagctgctcaatggtcatgagtcgcatgaaaaagggcataagccatttcaaaatttgcgttgccttcttcttg

Protein Analysis

155

Amino Acids

17.66

Weight (kDa)

5.29

Isoelectric Point (pI)

45.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 253
AcsI RAATTY 2 cut(s) 262, 445
AfaI GTAC 1 cut(s) 147
AfiI CCNNNNNNNGG 1 cut(s) 380
AgsI TTSAA 5 cut(s) 88, 228, 304, 358, 443
AluBI AGCT 4 cut(s) 16, 316, 324, 397
AluI AGCT 4 cut(s) 16, 316, 324, 397
ApeKI GCWGC 2 cut(s) 16, 397
ApoI RAATTY 2 cut(s) 262, 445
BbvI GCAGC 2 cut(s) 3, 384
BisI GCNGC 3 cut(s) 17, 254, 398
BlsI GCNGC 3 cut(s) 18, 255, 399
BmcAI AGTACT 1 cut(s) 147
BmsI GCATC 3 cut(s) 102, 227, 378
BpuEI CTTGAG 1 cut(s) 413
Bsc4I CCNNNNNNNGG 1 cut(s) 380
Bse3DI GCAATG 1 cut(s) 158
BseGI GGATG 1 cut(s) 93
BseLI CCNNNNNNNGG 1 cut(s) 380
BseMI GCAATG 1 cut(s) 158
BseXI GCAGC 2 cut(s) 3, 384
BslI CCNNNNNNNGG 1 cut(s) 380
Bsp143I GATC 2 cut(s) 3, 22
BspACI CCGC 1 cut(s) 253
BspHI TCATGA 1 cut(s) 409
BsrDI GCAATG 1 cut(s) 158
BssMI GATC 2 cut(s) 3, 22
Bst4CI ACNGT 1 cut(s) 232
BstC8I GCNNGC 2 cut(s) 165, 216
BstF5I GGATG 1 cut(s) 93
BstKTI GATC 2 cut(s) 6, 25
BstMBI GATC 2 cut(s) 3, 22
BstMWI GCNNNNNNNGC 1 cut(s) 397
BstV1I GCAGC 2 cut(s) 3, 384
BtsCI GGATG 1 cut(s) 93
Cac8I GCNNGC 2 cut(s) 165, 216
CciI TCATGA 1 cut(s) 409
Csp6I GTAC 1 cut(s) 146
CviAII CATG 5 cut(s) 62, 362, 385, 410, 419
CviJI RGCY 7 cut(s) 16, 214, 256, 316, 324, 397, 436
CviKI_1 RGCY 7 cut(s) 16, 214, 256, 316, 324, 397, 436
CviQI GTAC 1 cut(s) 146
DpnI GATC 2 cut(s) 5, 24
DpnII GATC 2 cut(s) 3, 22
FaeI CATG 5 cut(s) 65, 365, 388, 413, 422
FatI CATG 5 cut(s) 61, 361, 384, 409, 418
Fnu4HI GCNGC 3 cut(s) 17, 254, 398
FokI GGATG 1 cut(s) 80
Fsp4HI GCNGC 3 cut(s) 17, 254, 398
GluI GCNGC 3 cut(s) 17, 254, 398
Hin1II CATG 5 cut(s) 65, 365, 388, 413, 422
HindIII AAGCTT 1 cut(s) 322
HinfI GANTC 2 cut(s) 193, 413
Hpy166II GTNNAC 1 cut(s) 11
Hpy188III TCNNGA 3 cut(s) 301, 374, 410
Hpy8I GTNNAC 1 cut(s) 11
HpyCH4III ACNGT 1 cut(s) 232
HpyCH4V TGCA 2 cut(s) 218, 337
HpyF10VI GCNNNNNNNGC 1 cut(s) 397
Hsp92II CATG 5 cut(s) 65, 365, 388, 413, 422
Kzo9I GATC 2 cut(s) 3, 22
LmnI GCTCC 1 cut(s) 328
LpnPI CCDG 6 cut(s) 33, 122, 177, 221, 228, 387
Lsp1109I GCAGC 2 cut(s) 3, 384
LweI GCATC 3 cut(s) 102, 227, 378
MaeIII GTNAC 1 cut(s) 57
MalI GATC 2 cut(s) 5, 24
MboI GATC 2 cut(s) 3, 22
MboII GAAGA 3 cut(s) 213, 216, 452
MfeI CAATTG 2 cut(s) 168, 274
MluCI AATT 8 cut(s) 37, 49, 127, 168, 262, 274, 352, 445
MlyI GAGTC 1 cut(s) 422
MnlI CCTC 2 cut(s) 44, 166
MseI TTAA 2 cut(s) 53, 110
MspA1I CMGCKG 1 cut(s) 16
MunI CAATTG 2 cut(s) 168, 274
MwoI GCNNNNNNNGC 1 cut(s) 397
NdeII GATC 2 cut(s) 3, 22
NlaIII CATG 5 cut(s) 65, 365, 388, 413, 422
NmuCI GTSAC 1 cut(s) 57
PagI TCATGA 1 cut(s) 409
PfeI GAWTC 1 cut(s) 193
PkrI GCNGC 3 cut(s) 18, 255, 399
PleI GAGTC 1 cut(s) 421
PpsI GAGTC 1 cut(s) 421
PvuII CAGCTG 1 cut(s) 16
RsaI GTAC 1 cut(s) 147
RsaNI GTAC 1 cut(s) 146
SaqAI TTAA 2 cut(s) 53, 110
SatI GCNGC 3 cut(s) 17, 254, 398
Sau3AI GATC 2 cut(s) 3, 22
ScaI AGTACT 1 cut(s) 147
SchI GAGTC 1 cut(s) 422
SetI ASST 5 cut(s) 18, 141, 318, 326, 399
SfaNI GCATC 3 cut(s) 102, 227, 378
SmlI CTYRAG 1 cut(s) 392
SmoI CTYRAG 1 cut(s) 392
Sse9I AATT 8 cut(s) 37, 49, 127, 168, 262, 274, 352, 445
SsiI CCGC 1 cut(s) 253
TaaI ACNGT 1 cut(s) 232
TasI AATT 8 cut(s) 37, 49, 127, 168, 262, 274, 352, 445
TatI WGTACW 1 cut(s) 145
TauI GCSGC 1 cut(s) 256
TfiI GAWTC 1 cut(s) 193
Tru1I TTAA 2 cut(s) 53, 110
Tru9I TTAA 2 cut(s) 53, 110
TseFI GTSAC 1 cut(s) 57
TseI GCWGC 2 cut(s) 16, 397
Tsp45I GTSAC 1 cut(s) 57
TspDTI ATGAA 3 cut(s) 147, 309, 435
TspGWI ACGGA 1 cut(s) 86
XapI RAATTY 2 cut(s) 262, 445
ZrmI AGTACT 1 cut(s) 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.