Rmu_co8518351.1_g000001

MAP kinase kinase kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8518351.1
N/A
Physical Location & Seq
Reverse (-)
59 .. 937
879 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8518351.1_g000001.1.cds

Sequence Viewer

Length: 363 bp
atgttctacttgatgcacaaatgtatcccaaagttgctgatcgattttggtttagcaaagatttgtgcagatgatgaagagacagtagaaactgcggcaatttgtgggacaatgggtgacatggctcccgaatacctcataacgggcatcctttccatgaaaaccgatgtctacagctatggagtatgcaaacggacgggaaactatgtccctaaatcccaattccagcagagatcggattcgcacctcagtaccagaccacctgacatttttcttcagtcagtgctcgacgccggtgatcaagacacgaaccggctccgccttcttgctcagcctgcagcgccgaacaccgctgattgctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04010 ko04016 ko04722 ko04912 ko05166 map04010 map04016 map04722 map04912 map05166
Pfam Domains
Protein Families
Pkinase

Protein Analysis

120

Amino Acids

13.27

Weight (kDa)

4.96

Isoelectric Point (pI)

45.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 171
AciI CCGC 3 cut(s) 95, 319, 351
AcuI CTGAAG 1 cut(s) 260
AcyI GRCGYC 1 cut(s) 291
AfaI GTAC 1 cut(s) 253
AfiI CCNNNNNNNGG 1 cut(s) 142
AluBI AGCT 1 cut(s) 177
AluI AGCT 1 cut(s) 177
Alw21I GWGCWC 1 cut(s) 288
Alw26I GTCTC 1 cut(s) 74
ApeKI GCWGC 1 cut(s) 338
AspLEI GCGC 1 cut(s) 343
AsuHPI GGTGA 2 cut(s) 128, 308
BaeI ACNNNNGTAYC 4 cut(s) 7, 40, 235, 268
Bbv12I GWGCWC 1 cut(s) 288
BbvI GCAGC 1 cut(s) 350
BciVI GTATCC 1 cut(s) 35
BclI TGATCA 1 cut(s) 298
BcoDI GTCTC 1 cut(s) 74
BfmI CTRYAG 2 cut(s) 172, 336
BfoI RGCGCY 1 cut(s) 344
BfuI GTATCC 1 cut(s) 35
BisI GCNGC 2 cut(s) 96, 339
BlpI GCTNAGC 1 cut(s) 330
BlsI GCNGC 2 cut(s) 97, 340
BmiI GGNNCC 2 cut(s) 126, 317
BmsI GCATC 2 cut(s) 3, 156
Bpu1102I GCTNAGC 1 cut(s) 330
Bsa29I ATCGAT 1 cut(s) 42
BsaHI GRCGYC 1 cut(s) 291
Bsc4I CCNNNNNNNGG 1 cut(s) 142
Bse118I RCCGGY 2 cut(s) 293, 312
BseCI ATCGAT 1 cut(s) 42
BseGI GGATG 1 cut(s) 147
BseLI CCNNNNNNNGG 1 cut(s) 142
BseMII CTCAG 2 cut(s) 262, 344
BseXI GCAGC 1 cut(s) 350
BsgI GTGCAG 1 cut(s) 87
BshVI ATCGAT 1 cut(s) 42
BsiHKAI GWGCWC 1 cut(s) 288
BsiSI CCGG 2 cut(s) 294, 313
BslFI GGGAC 2 cut(s) 121, 194
BslI CCNNNNNNNGG 1 cut(s) 142
BsmAI GTCTC 1 cut(s) 74
BsmFI GGGAC 2 cut(s) 121, 194
Bsp1286I GDGCHC 1 cut(s) 288
Bsp143I GATC 3 cut(s) 39, 233, 298
Bsp1720I GCTNAGC 1 cut(s) 330
BspACI CCGC 3 cut(s) 95, 319, 351
BspCNI CTCAG 2 cut(s) 261, 343
BspDI ATCGAT 1 cut(s) 42
BspLI GGNNCC 2 cut(s) 126, 317
BspMAI CTGCAG 1 cut(s) 340
BsrFI RCCGGY 2 cut(s) 293, 312
BssAI RCCGGY 2 cut(s) 293, 312
BssMI GATC 3 cut(s) 39, 233, 298
BssNI GRCGYC 1 cut(s) 291
Bst4CI ACNGT 1 cut(s) 85
Bst6I CTCTTC 1 cut(s) 72
BstACI GRCGYC 1 cut(s) 291
BstC8I GCNNGC 1 cut(s) 336
BstDEI CTNAG 2 cut(s) 248, 330
BstF5I GGATG 1 cut(s) 147
BstH2I RGCGCY 1 cut(s) 344
BstHHI GCGC 1 cut(s) 343
BstKTI GATC 3 cut(s) 42, 236, 301
BstMAI GTCTC 1 cut(s) 74
BstMBI GATC 3 cut(s) 39, 233, 298
BstMWI GCNNNNNNNGC 2 cut(s) 335, 340
BstSFI CTRYAG 2 cut(s) 172, 336
BstV1I GCAGC 1 cut(s) 350
Bsu15I ATCGAT 1 cut(s) 42
BsuI GTATCC 1 cut(s) 35
BsuTUI ATCGAT 1 cut(s) 42
BtsCI GGATG 1 cut(s) 147
BtsIMutI CAGTG 1 cut(s) 288
Cac8I GCNNGC 1 cut(s) 336
CfoI GCGC 1 cut(s) 343
Cfr10I RCCGGY 2 cut(s) 293, 312
ClaI ATCGAT 1 cut(s) 42
CseI GACGC 1 cut(s) 299
Csp6I GTAC 1 cut(s) 252
CviAII CATG 2 cut(s) 121, 157
CviJI RGCY 4 cut(s) 125, 177, 316, 334
CviKI_1 RGCY 4 cut(s) 125, 177, 316, 334
CviQI GTAC 1 cut(s) 252
DdeI CTNAG 2 cut(s) 248, 330
DpnI GATC 3 cut(s) 41, 235, 300
DpnII GATC 3 cut(s) 39, 233, 298
Eam1104I CTCTTC 1 cut(s) 72
EarI CTCTTC 1 cut(s) 72
EciI GGCGGA 1 cut(s) 308
Eco57I CTGAAG 1 cut(s) 260
FaeI CATG 2 cut(s) 124, 160
FaiI YATR 6 cut(s) 122, 140, 158, 180, 187, 207
FaqI GGGAC 2 cut(s) 121, 194
FatI CATG 2 cut(s) 120, 156
FbaI TGATCA 1 cut(s) 298
FblI GTMKAC 1 cut(s) 171
Fnu4HI GCNGC 2 cut(s) 96, 339
FokI GGATG 1 cut(s) 134
Fsp4HI GCNGC 2 cut(s) 96, 339
GlaI GCGC 1 cut(s) 342
GluI GCNGC 2 cut(s) 96, 339
HaeII RGCGCY 1 cut(s) 344
HapII CCGG 2 cut(s) 294, 313
HgaI GACGC 1 cut(s) 299
HhaI GCGC 1 cut(s) 343
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 2 cut(s) 124, 160
Hin6I GCGC 1 cut(s) 341
HinP1I GCGC 1 cut(s) 341
HinfI GANTC 1 cut(s) 239
HpaII CCGG 2 cut(s) 294, 313
HphI GGTGA 2 cut(s) 128, 308
Hpy166II GTNNAC 1 cut(s) 172
Hpy188I TCNGA 1 cut(s) 238
Hpy188III TCNNGA 2 cut(s) 128, 302
Hpy8I GTNNAC 1 cut(s) 172
Hpy99I CGWCG 1 cut(s) 293
HpyAV CCTTC 1 cut(s) 332
HpyCH4III ACNGT 1 cut(s) 85
HpyCH4V TGCA 4 cut(s) 16, 68, 189, 338
HpyF10VI GCNNNNNNNGC 2 cut(s) 335, 340
HpyF3I CTNAG 2 cut(s) 248, 330
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 2 cut(s) 124, 160
HspAI GCGC 1 cut(s) 341
Ksp22I TGATCA 1 cut(s) 298
Kzo9I GATC 3 cut(s) 39, 233, 298
LmnI GCTCC 2 cut(s) 130, 321
LpnPI CCDG 6 cut(s) 239, 268, 276, 307, 326, 348
Lsp1109I GCAGC 1 cut(s) 350
LweI GCATC 2 cut(s) 3, 156
MaeIII GTNAC 1 cut(s) 116
MalI GATC 3 cut(s) 41, 235, 300
MboI GATC 3 cut(s) 39, 233, 298
MboII GAAGA 2 cut(s) 89, 266
MhlI GDGCHC 1 cut(s) 288
MluCI AATT 2 cut(s) 99, 221
MnlI CCTC 2 cut(s) 146, 257
MspA1I CMGCKG 1 cut(s) 353
MspI CCGG 2 cut(s) 294, 313
MwoI GCNNNNNNNGC 2 cut(s) 335, 340
NdeII GATC 3 cut(s) 39, 233, 298
NlaIII CATG 2 cut(s) 124, 160
NlaIV GGNNCC 2 cut(s) 126, 317
NmuCI GTSAC 1 cut(s) 116
PfeI GAWTC 1 cut(s) 239
PkrI GCNGC 2 cut(s) 97, 340
PspN4I GGNNCC 2 cut(s) 126, 317
PstI CTGCAG 1 cut(s) 340
RsaI GTAC 1 cut(s) 253
RsaNI GTAC 1 cut(s) 252
SatI GCNGC 2 cut(s) 96, 339
Sau3AI GATC 3 cut(s) 39, 233, 298
SduI GDGCHC 1 cut(s) 288
SetI ASST 4 cut(s) 138, 179, 249, 265
SfaNI GCATC 2 cut(s) 3, 156
SfcI CTRYAG 2 cut(s) 172, 336
SgrAI CRCCGGYG 1 cut(s) 293
Sse9I AATT 2 cut(s) 99, 221
SsiI CCGC 3 cut(s) 95, 319, 351
TaaI ACNGT 1 cut(s) 85
TaqI TCGA 2 cut(s) 42, 288
TasI AATT 2 cut(s) 99, 221
TauI GCSGC 1 cut(s) 98
TfiI GAWTC 1 cut(s) 239
TscAI CASTG 1 cut(s) 288
TseFI GTSAC 1 cut(s) 116
TseI GCWGC 1 cut(s) 338
Tsp45I GTSAC 1 cut(s) 116
TspDTI ATGAA 2 cut(s) 90, 173
TspGWI ACGGA 1 cut(s) 208
TspRI CASTG 1 cut(s) 288
XmiI GTMKAC 1 cut(s) 171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.