Rmu_sc0000063.1_g000046

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000063.1
N/A
Physical Location & Seq
Reverse (-)
232851 .. 235601
2751 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000063.1_g000046.1.cds

Sequence Viewer

Length: 2349 bp
atgcctccagttgctggccgtctgcgacgattgagagagaaaggacatatcttcgccattggaaaccagcgcttagtgaaactagtacgtttaagaggcagccagcagccttgcccgattgcgcaagcccttctgaaatggaaagccagcttacaaaatcaaacccagctcatcagctcatggatataccttcccagtacaaataatgccaccaatacttccagcaatcccaaagcaattgcaaacccatgcatttggatgggtatctcgtgcaatgctgctggaagtgtgaacaggataaaccttaccaattctggtatacaaggtacgctacatgaattctcattcttgtcattccaaaatctggtgtatatagacttcagctcaaataaactctttgatgtcataccatctggaattagttccctctcaaaactcatttatcttgatctatctagaaatcaattttctggaaaaatcccgccagaaattggtcttctaagaagtctcacatttctctatctctggagcaataatatttctggcactattcctatagggataggaaacctgaaatcattggtggatctagcgttgagctacaatcaactcagtggttcaataccgcaaacattgggtgatctgaccaaccttgccactctctatctcggttccaataatctttctggcactattcctatggagataggaaacctgaaaccattggtggatctagatttgggcatcaatcaactcagtggttcaattccgacaacattaggtaatttaaccaaccttaccactctccatctccatacaaataatctttctggccctattcctatggtgataggaaacctgaaatcattggtgaatctagagttgagcaccaatcaactcagtggttcaattccgacaacactgggggatctgaccaaccttaccactctctatctccatataaataatctttctggccctattcctacggagataggaaacctgaaatcattggtggatctagcgttgagctccaatcaactcagtggttcaattccgaccacactgggggatctgaccaaccttaccactctctatctccatataaataatctttctggccctattcctacggagataggaaacctgaaatcattggtgaatctagagttgagcaccaatcaactcagtggttcaattccgacaacactgggggatctgaccaaccttgtcactctctatctccatacaaataatctttctggccctattcctacggagataggaaacctgaaatcattggtggatctacagttgagcaccaatcaactcaatggttcaattccgacaacattgggtgatttgaccaaccttgccattctatatctccatacaaataatctttctggccctattcctatggagataggaaacctgaaatcattggtggatctacagttgagcaccaatcaactcaatggttcaattccgacaacattgggtgatttgaccaaccttgccattctatatctccatacaaataatctttctggccctattcctacggagataggaaacttgaaatcattggtcaatctagccttgagcaccaatcaactcagtggttcaattccgccaacactgggggatctgaccaaccttgccactctctatctccatacaaataatctttctggccctattcctacggagataggaaacctgaaatcattggtggatctacagttgagcaccaatcaactcagtggttcaattccgccaacactgggggatctgaccaaccttgccactctctatctccatacaaataatctttatggccctattcctacggagataggaaacctgaaatcattggtggatctagagtttagcaccaatcaactcagtggttcaattccgccaacactgggggatctgaccaaccttgccactctctatctccatacaaataatctttctggccctattcctacggagataggaaacctgaaatcattggtgaatctagccttgagcaccaatcatctcagtgggttaattccgccaacactgggtgatctgaccaaccttaccactctctatctcgattcaaataatctttctggcactattcctagggagataggaaacctgaaatcattggtggttctagagttgagcaccaatcaactcagtggttcaattccgacaacactgggtgatctgaccaaccttaccactctctatctccatacaaataatctttctggccctattcctacggagataggaaacttgaaatcattggtggttctagagttgagcaccaatcaactcagtggttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

782

Amino Acids

83.19

Weight (kDa)

5.76

Isoelectric Point (pI)

11.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 123
AccB7I CCANNNNNTGG 3 cut(s) 14, 364, 491
AccI GTMKAC 1 cut(s) 319
AciI CCGC 6 cut(s) 482, 626, 1634, 1778, 1922, 2066
AcoI YGGCCR 1 cut(s) 16
AcsI RAATTY 1 cut(s) 338
AcuI CTGAAG 1 cut(s) 364
AdeI CACNNNGTG 2 cut(s) 2078, 2222
AfaI GTAC 3 cut(s) 87, 199, 328
AfeI AGCGCT 1 cut(s) 71
AfiI CCNNNNNNNGG 8 cut(s) 14, 364, 491, 1068, 1643, 1787, 1931, 2075
AhlI ACTAGT 1 cut(s) 82
AluBI AGCT 6 cut(s) 150, 169, 177, 384, 600, 1032
AluI AGCT 6 cut(s) 150, 169, 177, 384, 600, 1032
Alw26I GTCTC 1 cut(s) 512
AlwNI CAGNNNCTG 1 cut(s) 14
Aor51HI AGCGCT 1 cut(s) 71
ApeKI GCWGC 3 cut(s) 99, 106, 278
ApoI RAATTY 1 cut(s) 338
Asp700I GAANNNNTTC 1 cut(s) 421
AspA2I CCTAGG 1 cut(s) 2138
AspLEI GCGC 2 cut(s) 72, 124
AsuHPI GGTGA 9 cut(s) 650, 859, 883, 1171, 1370, 1514, 2035, 2090, 2234
AvrII CCTAGG 1 cut(s) 2138
BanII GRGCYC 1 cut(s) 1034
BarI GAAGNNNNNNTAC 2 cut(s) 362, 394
BauI CACGAG 1 cut(s) 268
BbsI GAAGAC 1 cut(s) 488
BbvI GCAGC 3 cut(s) 111, 118, 265
BccI CCATC 3 cut(s) 253, 418, 816
BceAI ACGGC 1 cut(s) 3
BcoDI GTCTC 1 cut(s) 512
BcuI ACTAGT 1 cut(s) 82
BfmI CTRYAG 4 cut(s) 555, 1310, 1454, 1742
BfoI RGCGCY 1 cut(s) 73
BisI GCNGC 3 cut(s) 100, 107, 279
BlnI CCTAGG 1 cut(s) 2138
BlsI GCNGC 3 cut(s) 101, 108, 280
BmiI GGNNCC 1 cut(s) 673
BmrI ACTGGG 9 cut(s) 189, 932, 1076, 1220, 1652, 1796, 1940, 2084, 2228
BmsI GCATC 1 cut(s) 753
BmuI ACTGGG 9 cut(s) 189, 932, 1076, 1220, 1652, 1796, 1940, 2084, 2228
BpiI GAAGAC 1 cut(s) 488
BpmI CTGGAG 1 cut(s) 547
BpuEI CTTGAG 2 cut(s) 1624, 2056
BsaBI GATNNNNATC 1 cut(s) 263
BsaJI CCNNGG 1 cut(s) 2138
Bsc4I CCNNNNNNNGG 8 cut(s) 14, 364, 491, 1068, 1643, 1787, 1931, 2075
Bse3DI GCAATG 1 cut(s) 280
Bse8I GATNNNNATC 1 cut(s) 263
BseDI CCNNGG 1 cut(s) 2138
BseGI GGATG 1 cut(s) 264
BseJI GATNNNNATC 1 cut(s) 263
BseLI CCNNNNNNNGG 8 cut(s) 14, 364, 491, 1068, 1643, 1787, 1931, 2075
BseMI GCAATG 1 cut(s) 280
BseXI GCAGC 3 cut(s) 111, 118, 265
BseYI CCCAGC 1 cut(s) 165
BslI CCNNNNNNNGG 8 cut(s) 14, 364, 491, 1068, 1643, 1787, 1931, 2075
BsmAI GTCTC 1 cut(s) 512
BspACI CCGC 6 cut(s) 482, 626, 1634, 1778, 1922, 2066
BspLI GGNNCC 1 cut(s) 673
BsrDI GCAATG 1 cut(s) 280
BssECI CCNNGG 1 cut(s) 2138
BssNAI GTATAC 1 cut(s) 320
BssSI CACGAG 1 cut(s) 268
BssT1I CCWWGG 1 cut(s) 2138
Bst1107I GTATAC 1 cut(s) 320
Bst2BI CACGAG 1 cut(s) 268
Bst4CI ACNGT 3 cut(s) 1314, 1458, 1746
BstC8I GCNNGC 4 cut(s) 16, 104, 126, 148
BstF5I GGATG 1 cut(s) 264
BstH2I RGCGCY 1 cut(s) 73
BstHHI GCGC 2 cut(s) 72, 124
BstMAI GTCTC 1 cut(s) 512
BstSFI CTRYAG 4 cut(s) 555, 1310, 1454, 1742
BstV1I GCAGC 3 cut(s) 111, 118, 265
BstV2I GAAGAC 1 cut(s) 488
BstXI CCANNNNNNTGG 1 cut(s) 255
BstZ17I GTATAC 1 cut(s) 320
BtsCI GGATG 1 cut(s) 264
Cac8I GCNNGC 4 cut(s) 16, 104, 126, 148
CaiI CAGNNNCTG 1 cut(s) 14
CfoI GCGC 2 cut(s) 72, 124
Csp6I GTAC 3 cut(s) 86, 198, 327
CviAII CATG 3 cut(s) 180, 249, 335
CviQI GTAC 3 cut(s) 86, 198, 327
DraIII CACNNNGTG 2 cut(s) 2078, 2222
EaeI YGGCCR 1 cut(s) 16
EciI GGCGGA 4 cut(s) 1623, 1767, 1911, 2055
Ecl136II GAGCTC 1 cut(s) 1032
Eco130I CCWWGG 1 cut(s) 2138
Eco24I GRGCYC 1 cut(s) 1034
Eco47III AGCGCT 1 cut(s) 71
Eco53kI GAGCTC 1 cut(s) 1032
Eco57I CTGAAG 1 cut(s) 364
EcoICRI GAGCTC 1 cut(s) 1032
EcoRI GAATTC 1 cut(s) 338
EcoT14I CCWWGG 1 cut(s) 2138
EcoT22I ATGCAT 1 cut(s) 254
EcoT38I GRGCYC 1 cut(s) 1034
ErhI CCWWGG 1 cut(s) 2138
FaeI CATG 3 cut(s) 183, 252, 338
FatI CATG 3 cut(s) 179, 248, 334
FauI CCCGC 1 cut(s) 489
FblI GTMKAC 1 cut(s) 319
Fnu4HI GCNGC 3 cut(s) 100, 107, 279
FokI GGATG 1 cut(s) 271
FriOI GRGCYC 1 cut(s) 1034
Fsp4HI GCNGC 3 cut(s) 100, 107, 279
FspI TGCGCA 1 cut(s) 123
GlaI GCGC 2 cut(s) 71, 123
GluI GCNGC 3 cut(s) 100, 107, 279
GsaI CCCAGC 1 cut(s) 169
GsuI CTGGAG 1 cut(s) 547
HaeII RGCGCY 1 cut(s) 73
HhaI GCGC 2 cut(s) 72, 124
Hin1II CATG 3 cut(s) 183, 252, 338
Hin6I GCGC 2 cut(s) 70, 122
HinP1I GCGC 2 cut(s) 70, 122
HinfI GANTC 4 cut(s) 874, 1162, 2026, 2111
HphI GGTGA 9 cut(s) 650, 859, 883, 1171, 1370, 1514, 2035, 2090, 2234
Hpy166II GTNNAC 2 cut(s) 292, 320
Hpy8I GTNNAC 2 cut(s) 292, 320
Hpy99I CGWCG 1 cut(s) 30
HpyAV CCTTC 2 cut(s) 140, 200
HpyCH4III ACNGT 3 cut(s) 1314, 1458, 1746
HpyCH4IV ACGT 1 cut(s) 88
HpyCH4V TGCA 3 cut(s) 242, 252, 273
HpySE526I ACGT 1 cut(s) 88
Hsp92II CATG 3 cut(s) 183, 252, 338
HspAI GCGC 2 cut(s) 70, 122
LmnI GCTCC 2 cut(s) 528, 1037
Lsp1109I GCAGC 3 cut(s) 111, 118, 265
LweI GCATC 1 cut(s) 753
MaeII ACGT 1 cut(s) 88
MaeIII GTNAC 1 cut(s) 1231
MboII GAAGA 2 cut(s) 43, 488
MfeI CAATTG 1 cut(s) 237
MmeI TCCRAC 7 cut(s) 794, 938, 1082, 1226, 1370, 1514, 2234
MnlI CCTC 3 cut(s) 15, 89, 437
Mph1103I ATGCAT 1 cut(s) 254
MroXI GAANNNNTTC 1 cut(s) 421
MseI TTAA 4 cut(s) 92, 788, 2060, 2347
MslI CAYNNNNRTG 2 cut(s) 257, 2052
MunI CAATTG 1 cut(s) 237
NlaIII CATG 3 cut(s) 183, 252, 338
NlaIV GGNNCC 1 cut(s) 673
NmuCI GTSAC 1 cut(s) 1231
NsbI TGCGCA 1 cut(s) 123
NsiI ATGCAT 1 cut(s) 254
PdmI GAANNNNTTC 1 cut(s) 421
PfeI GAWTC 4 cut(s) 874, 1162, 2026, 2111
PflMI CCANNNNNTGG 3 cut(s) 14, 364, 491
PkrI GCNGC 3 cut(s) 101, 108, 280
Psp124BI GAGCTC 1 cut(s) 1034
PspFI CCCAGC 1 cut(s) 165
PspN4I GGNNCC 1 cut(s) 673
PstNI CAGNNNCTG 1 cut(s) 14
RsaI GTAC 3 cut(s) 87, 199, 328
RsaNI GTAC 3 cut(s) 86, 198, 327
RseI CAYNNNNRTG 2 cut(s) 257, 2052
SacI GAGCTC 1 cut(s) 1034
SaqAI TTAA 4 cut(s) 92, 788, 2060, 2347
SatI GCNGC 3 cut(s) 100, 107, 279
SfaNI GCATC 1 cut(s) 753
SfcI CTRYAG 4 cut(s) 555, 1310, 1454, 1742
SmiMI CAYNNNNRTG 2 cut(s) 257, 2052
SmlI CTYRAG 2 cut(s) 1603, 2035
SmoI CTYRAG 2 cut(s) 1603, 2035
SpeI ACTAGT 1 cut(s) 82
SsiI CCGC 6 cut(s) 482, 626, 1634, 1778, 1922, 2066
SspI AATATT 1 cut(s) 538
SstI GAGCTC 1 cut(s) 1034
StyI CCWWGG 1 cut(s) 2138
TaaI ACNGT 3 cut(s) 1314, 1458, 1746
TaiI ACGT 1 cut(s) 91
TaqI TCGA 1 cut(s) 2109
TatI WGTACW 1 cut(s) 197
TfiI GAWTC 4 cut(s) 874, 1162, 2026, 2111
Tru1I TTAA 4 cut(s) 92, 788, 2060, 2347
Tru9I TTAA 4 cut(s) 92, 788, 2060, 2347
TseFI GTSAC 1 cut(s) 1231
TseI GCWGC 3 cut(s) 99, 106, 278
Tsp45I GTSAC 1 cut(s) 1231
TspDTI ATGAA 1 cut(s) 351
TspGWI ACGGA 8 cut(s) 1004, 1148, 1292, 1580, 1724, 1868, 2012, 2300
Van91I CCANNNNNTGG 3 cut(s) 14, 364, 491
XapI RAATTY 1 cut(s) 338
XbaI TCTAGA 7 cut(s) 455, 733, 877, 1165, 1885, 2173, 2317
XmaJI CCTAGG 1 cut(s) 2138
XmiI GTMKAC 1 cut(s) 319
XmnI GAANNNNTTC 1 cut(s) 421
Zsp2I ATGCAT 1 cut(s) 254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.