Rmu_sc0000101.1_g000013

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000101.1
N/A
Physical Location & Seq
Reverse (-)
53239 .. 55917
2679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000101.1_g000013.1.cds

Sequence Viewer

Length: 2679 bp
atgtaccttcccagtactaaaaatgccaccaatacttcctccaatcccaaagcaattgcaaacccatgcatttggaccggtatctcgtgcaatgttgccggaagtgtcaacaggataaaccttaccaattatggtatacaaggtatgctacatgaattctcattcttgtcattccctagtcttgtgtatctaaacctcagctcaaataaactctccgatgtcataccacctggaattagttccctctcgaaactcagttttcttgatctatctagtaatcaattttctgggaaaatcccgccagaaattggtcttctaagaagtctcacatttctccacctctattcaaataatctctctggcaccattccaaaagagttagggaacctacaatctttggtggatctacaattgggcatcaatcaactcagtggtttagttccaacaacattgggtgatctgactaaccttacgactctcattctccgtacaaataatctttccggccccattcctatggagataggaaacctaaaatcattggtgaaactaatcttgagtgccaatcacctcagtggttcaattccgacaacattaggtggtctgaccaaccttaccactctctatctccatataaataatctttctggcactattcccatggagataggaaacctaaaatcattggtgattctggagttgggcactaatcaactcagtggttcaattccgataacattaggtggtctgaccaaccttaccactctctatctctatacaaataatctttctggcactattcccatggagataggaaacctgaaatcattggtgaatctaggcttgagcatcaatcacctcaacggttcaattccgacaacattaggggatctgaccaaccttaccactctttatctccatataaataatctttctggccctattcctatggagataggaaacttgaaatcattggtgaatctaagcttgagcactaatcacctcagtggttcaattccgacaacattaggcggtctgaccaaccttaccactctctatctctatacaaataatctttctggcactattcccatagagataggaaacctgaaatcattggtgggtctagacttgagcgccaatcaactcagtggttcaattccgacaacattaggcggtctgaccaaccttaccactctctatctctatacaaataatctttctggcactattcccatagagataggaaacctgaaatcattggtgggtctagacttgagcgccaatcaactcagtggttcaattccgacaacattaggcggtctgaccaaccttaccactctctatctctatacaaataatctttctggcactattcccatagagataggaaacctgaaatcattggtgggtctagacttgagcgccaatcaactcagtggttcaattccgacaacattaggcggtctgaccaaccttaccactctctatctctatacaaataatctttctggcactattcccaaccttaccactctctatctccatacaaataatctttctggcactattcccatggagataggaaatatcccgaagttgatagtattggaattgggtataaaccaattttcaggttatttgccacataacatttgccgagctggatcactcacacactttacagctttctccaatcatctaagtggtccaatccctaaattcttgaagacctgcacgagcttattcagagtccgtcttgaagggaaccaattgacaggcaatatatctgaagtctttggtgtttatccaagtctcaattttatagatttgagcaacaaccaactttatggtgaagtctcaccaaattggggattgtgcctaaatttaacaaccctacgaatagctgcaaacaaacttactggttctataccagctaagattggaaacgcaacccaaattcatgagctggatctttcttcaaatagtttagttgggacaattccaaaggagtttgggagattaacttcaatggtgaagctgatggtggacgacaatcaactttcaggtcgtattcctttagagtttaaatcattgactgatctagaatatcttgatctatcagcaaacaaattcaatgattcaattccaagttttgtaggtgactttcacaagttatattacttgaatttgagcaacaacaagttcggtcaagtaattccatttcaattggggaagttaattcagttgtcccaactagattttagttttaacgcagttgaaggtcagataccatcagatattagtaatatgcaaagtctggagatacttaatatatcccacaacaatctctctggtttcattccaacaagttttgaagacatgcacgggttgtcgtatgttgacatatcctacaatgacttggaaggtccacttcccaacaacaaagcatttcaagctgctactcgggaagcattgcgagggaacaagggcttgtgtggcaacacacgatttttgcaaccctgcaataaacaaagcccaaaaaaggaccataaactcgtatttctgataatcttccctattcttggagcatttgcgcttctagccttcatatttgcattggtagtgaaaaggaaaaagaagcatcagcatggagacgtttctacaaccctgcaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

892

Amino Acids

95.98

Weight (kDa)

7.65

Isoelectric Point (pI)

20.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1742
AccB1I GGYRCC 1 cut(s) 362
AccB7I CCANNNNNTGG 1 cut(s) 308
AccI GTMKAC 1 cut(s) 136
AciI CCGC 5 cut(s) 299, 1032, 1176, 1320, 1464
AclWI GGATC 4 cut(s) 411, 897, 1675, 1980
AcsI RAATTY 6 cut(s) 155, 1721, 1885, 1959, 2132, 2188
AcuI CTGAAG 1 cut(s) 1812
AfaI GTAC 3 cut(s) 5, 16, 490
AfiI CCNNNNNNNGG 4 cut(s) 308, 1871, 2545, 2585
AgeI ACCGGT 1 cut(s) 77
AjnI CCWGG 1 cut(s) 229
AleI CACNNNNGTG 2 cut(s) 573, 1005
Alw21I GWGCWC 1 cut(s) 995
Alw26I GTCTC 4 cut(s) 329, 1820, 1864, 2649
AlwI GGATC 4 cut(s) 411, 897, 1675, 1980
Ama87I CYCGRG 1 cut(s) 2466
AoxI GGCC 2 cut(s) 505, 937
ApeKI GCWGC 2 cut(s) 1907, 2459
ApoI RAATTY 6 cut(s) 155, 1721, 1885, 1959, 2132, 2188
AsiGI ACCGGT 1 cut(s) 77
Asp700I GAANNNNTTC 1 cut(s) 238
AspLEI GCGC 4 cut(s) 1139, 1283, 1427, 2599
AspS9I GGNCC 6 cut(s) 75, 506, 938, 1709, 2429, 2548
AvaI CYCGRG 1 cut(s) 2466
AvaII GGWCC 4 cut(s) 75, 1709, 2429, 2548
BaeGI GKGCMC 1 cut(s) 707
BanI GGYRCC 1 cut(s) 362
BarI GAAGNNNNNNTAC 2 cut(s) 2274, 2306
BauI CACGAG 2 cut(s) 85, 1738
BbsI GAAGAC 3 cut(s) 305, 1736, 2385
Bbv12I GWGCWC 1 cut(s) 995
BbvCI CCTCAGC 1 cut(s) 197
BbvI GCAGC 2 cut(s) 1894, 2446
BccI CCATC 2 cut(s) 2038, 2302
BciT130I CCWGG 1 cut(s) 231
BcoDI GTCTC 4 cut(s) 329, 1820, 1864, 2649
BfaI CTAG 9 cut(s) 177, 273, 839, 1127, 1271, 1415, 2105, 2258, 2603
BfoI RGCGCY 3 cut(s) 1140, 1284, 1428
BfuAI ACCTGC 1 cut(s) 1742
BisI GCNGC 2 cut(s) 1908, 2460
BlsI GCNGC 2 cut(s) 1909, 2461
BmcAI AGTACT 1 cut(s) 16
Bme1390I CCNGG 1 cut(s) 231
Bme18I GGWCC 4 cut(s) 75, 1709, 2429, 2548
BmeT110I CYCGRG 1 cut(s) 2466
BmgT120I GGNCC 6 cut(s) 75, 506, 938, 1709, 2429, 2548
BmiI GGNNCC 4 cut(s) 364, 386, 508, 1769
BmrFI CCNGG 1 cut(s) 231
BmrI ACTGGG 1 cut(s) 6
BmsI GCATC 3 cut(s) 426, 858, 2653
BmuI ACTGGG 1 cut(s) 6
BpiI GAAGAC 3 cut(s) 305, 1736, 2385
BpmI CTGGAG 2 cut(s) 716, 2342
Bpu10I CCTNAGC 1 cut(s) 197
BpuEI CTTGAG 6 cut(s) 577, 865, 1009, 1153, 1297, 1441
BsaJI CCNNGG 3 cut(s) 660, 804, 1575
BsaWI WCCGGW 1 cut(s) 77
Bsc4I CCNNNNNNNGG 4 cut(s) 308, 1871, 2545, 2585
Bse118I RCCGGY 1 cut(s) 77
Bse1I ACTGG 2 cut(s) 12, 1927
Bse3DI GCAATG 2 cut(s) 97, 2474
BseBI CCWGG 1 cut(s) 231
BseDI CCNNGG 3 cut(s) 660, 804, 1575
BseLI CCNNNNNNNGG 4 cut(s) 308, 1871, 2545, 2585
BseMI GCAATG 2 cut(s) 97, 2474
BseMII CTCAG 9 cut(s) 211, 268, 442, 586, 730, 1018, 1162, 1306, 1450
BseNI ACTGG 2 cut(s) 12, 1927
BseSI GKGCMC 1 cut(s) 707
BseXI GCAGC 2 cut(s) 1894, 2446
BsgI GTGCAG 1 cut(s) 1720
BshFI GGCC 2 cut(s) 507, 939
BshNI GGYRCC 1 cut(s) 362
BshTI ACCGGT 1 cut(s) 77
BsiHKAI GWGCWC 1 cut(s) 995
BsiHKCI CYCGRG 1 cut(s) 2466
BsiSI CCGG 3 cut(s) 78, 99, 504
BslFI GGGAC 2 cut(s) 2011, 2236
BslI CCNNNNNNNGG 4 cut(s) 308, 1871, 2545, 2585
BsmAI GTCTC 4 cut(s) 329, 1820, 1864, 2649
BsmBI CGTCTC 1 cut(s) 2649
BsmFI GGGAC 2 cut(s) 2011, 2236
BsnI GGCC 2 cut(s) 507, 939
BsoBI CYCGRG 1 cut(s) 2466
Bsp1286I GDGCHC 2 cut(s) 707, 995
Bsp143I GATC 8 cut(s) 265, 403, 457, 889, 1667, 1972, 2101, 2116
Bsp19I CCATGG 3 cut(s) 660, 804, 1575
BspACI CCGC 5 cut(s) 299, 1032, 1176, 1320, 1464
BspANI GGCC 2 cut(s) 507, 939
BspCNI CTCAG 9 cut(s) 210, 267, 441, 585, 729, 1017, 1161, 1305, 1449
BspHI TCATGA 1 cut(s) 1963
BspLI GGNNCC 4 cut(s) 364, 386, 508, 1769
BspMI ACCTGC 1 cut(s) 1742
BspPI GGATC 4 cut(s) 411, 897, 1675, 1980
BspT107I GGYRCC 1 cut(s) 362
BsrDI GCAATG 2 cut(s) 97, 2474
BsrFI RCCGGY 1 cut(s) 77
BsrI ACTGG 2 cut(s) 12, 1927
BssAI RCCGGY 1 cut(s) 77
BssECI CCNNGG 3 cut(s) 660, 804, 1575
BssMI GATC 8 cut(s) 265, 403, 457, 889, 1667, 1972, 2101, 2116
BssNAI GTATAC 1 cut(s) 137
BssSI CACGAG 2 cut(s) 85, 1738
BssT1I CCWWGG 3 cut(s) 660, 804, 1575
Bst1107I GTATAC 1 cut(s) 137
Bst2BI CACGAG 2 cut(s) 85, 1738
Bst2UI CCWGG 1 cut(s) 231
Bst4CI ACNGT 1 cut(s) 866
BstDSI CCRYGG 3 cut(s) 660, 804, 1575
BstH2I RGCGCY 3 cut(s) 1140, 1284, 1428
BstHHI GCGC 4 cut(s) 1139, 1283, 1427, 2599
BstKTI GATC 8 cut(s) 268, 406, 460, 892, 1670, 1975, 2104, 2119
BstMAI GTCTC 4 cut(s) 329, 1820, 1864, 2649
BstMBI GATC 8 cut(s) 265, 403, 457, 889, 1667, 1972, 2101, 2116
BstMWI GCNNNNNNNGC 3 cut(s) 2456, 2499, 2603
BstNI CCWGG 1 cut(s) 231
BstNSI RCATGY 1 cut(s) 2386
BstSCI CCNGG 1 cut(s) 229
BstSLI GKGCMC 1 cut(s) 707
BstV1I GCAGC 2 cut(s) 1894, 2446
BstV2I GAAGAC 3 cut(s) 305, 1736, 2385
BstX2I RGATCY 3 cut(s) 403, 889, 1972
BstXI CCANNNNNNTGG 3 cut(s) 72, 517, 1850
BstYI RGATCY 3 cut(s) 403, 889, 1972
BstZ17I GTATAC 1 cut(s) 137
BsuRI GGCC 2 cut(s) 507, 939
BtgI CCRYGG 3 cut(s) 660, 804, 1575
BtsIMutI CAGTG 7 cut(s) 436, 580, 724, 1012, 1156, 1300, 1444
BveI ACCTGC 1 cut(s) 1742
CciI TCATGA 1 cut(s) 1963
CfoI GCGC 4 cut(s) 1139, 1283, 1427, 2599
Cfr10I RCCGGY 1 cut(s) 77
Cfr13I GGNCC 6 cut(s) 75, 506, 938, 1709, 2429, 2548
Csp6I GTAC 3 cut(s) 4, 15, 489
CspAI ACCGGT 1 cut(s) 77
CviAII CATG 8 cut(s) 66, 152, 661, 805, 1576, 1964, 2383, 2651
CviQI GTAC 3 cut(s) 4, 15, 489
DpnI GATC 8 cut(s) 267, 405, 459, 891, 1669, 1974, 2103, 2118
DpnII GATC 8 cut(s) 265, 403, 457, 889, 1667, 1972, 2101, 2116
DraI TTTAAA 1 cut(s) 2089
Eco130I CCWWGG 3 cut(s) 660, 804, 1575
Eco47I GGWCC 4 cut(s) 75, 1709, 2429, 2548
Eco57I CTGAAG 1 cut(s) 1812
Eco88I CYCGRG 1 cut(s) 2466
EcoRI GAATTC 1 cut(s) 155
EcoRII CCWGG 1 cut(s) 229
EcoT14I CCWWGG 3 cut(s) 660, 804, 1575
EcoT22I ATGCAT 1 cut(s) 71
ErhI CCWWGG 3 cut(s) 660, 804, 1575
Esp3I CGTCTC 1 cut(s) 2649
FaeI CATG 8 cut(s) 69, 155, 664, 808, 1579, 1967, 2386, 2654
FalI AAGNNNNNCTT 2 cut(s) 2418, 2450
FaqI GGGAC 2 cut(s) 2011, 2236
FatI CATG 8 cut(s) 65, 151, 660, 804, 1575, 1963, 2382, 2650
FauI CCCGC 1 cut(s) 306
FblI GTMKAC 1 cut(s) 136
Fnu4HI GCNGC 2 cut(s) 1908, 2460
Fsp4HI GCNGC 2 cut(s) 1908, 2460
FspBI CTAG 9 cut(s) 177, 273, 839, 1127, 1271, 1415, 2105, 2258, 2603
GlaI GCGC 4 cut(s) 1138, 1282, 1426, 2598
GluI GCNGC 2 cut(s) 1908, 2460
GsuI CTGGAG 2 cut(s) 716, 2342
HaeII RGCGCY 3 cut(s) 1140, 1284, 1428
HaeIII GGCC 2 cut(s) 507, 939
HapII CCGG 3 cut(s) 78, 99, 504
HhaI GCGC 4 cut(s) 1139, 1283, 1427, 2599
Hin1II CATG 8 cut(s) 69, 155, 664, 808, 1579, 1967, 2386, 2654
Hin6I GCGC 4 cut(s) 1137, 1281, 1425, 2597
HinP1I GCGC 4 cut(s) 1137, 1281, 1425, 2597
HincII GTYRAC 2 cut(s) 109, 2404
HindII GTYRAC 2 cut(s) 109, 2404
HindIII AAGCTT 1 cut(s) 985
HinfI GANTC 6 cut(s) 475, 691, 835, 979, 1752, 2141
HpaII CCGG 3 cut(s) 78, 99, 504
Hpy166II GTNNAC 5 cut(s) 109, 137, 2050, 2404, 2432
Hpy8I GTNNAC 5 cut(s) 109, 137, 2050, 2404, 2432
HpyAV CCTTC 5 cut(s) 17, 1757, 2276, 2420, 2617
HpyCH4III ACNGT 1 cut(s) 866
HpyCH4IV ACGT 1 cut(s) 2658
HpyF10VI GCNNNNNNNGC 3 cut(s) 2456, 2499, 2603
HpySE526I ACGT 1 cut(s) 2658
Hsp92II CATG 8 cut(s) 69, 155, 664, 808, 1579, 1967, 2386, 2654
HspAI GCGC 4 cut(s) 1137, 1281, 1425, 2597
Kzo9I GATC 8 cut(s) 265, 403, 457, 889, 1667, 1972, 2101, 2116
LmnI GCTCC 1 cut(s) 2588
Lsp1109I GCAGC 2 cut(s) 1894, 2446
LweI GCATC 3 cut(s) 426, 858, 2653
MaeI CTAG 9 cut(s) 177, 273, 839, 1127, 1271, 1415, 2105, 2258, 2603
MaeII ACGT 1 cut(s) 2658
MaeIII GTNAC 1 cut(s) 2162
MalI GATC 8 cut(s) 267, 405, 459, 891, 1669, 1974, 2103, 2118
MboI GATC 8 cut(s) 265, 403, 457, 889, 1667, 1972, 2101, 2116
MboII GAAGA 5 cut(s) 305, 1741, 1971, 2390, 2566
MfeI CAATTG 4 cut(s) 54, 410, 1772, 2228
MflI RGATCY 3 cut(s) 403, 889, 1972
MhlI GDGCHC 2 cut(s) 707, 995
MlyI GAGTC 2 cut(s) 469, 1761
MmeI TCCRAC 8 cut(s) 467, 611, 899, 1043, 1187, 1331, 1475, 2390
MnlI CCTC 8 cut(s) 49, 206, 254, 350, 581, 869, 1013, 2474
Mph1103I ATGCAT 1 cut(s) 71
MroXI GAANNNNTTC 1 cut(s) 238
MseI TTAA 6 cut(s) 1889, 2024, 2088, 2240, 2271, 2331
MslI CAYNNNNRTG 5 cut(s) 515, 573, 1005, 1704, 2649
MspI CCGG 3 cut(s) 78, 99, 504
MspR9I CCNGG 1 cut(s) 231
MunI CAATTG 4 cut(s) 54, 410, 1772, 2228
MvaI CCWGG 1 cut(s) 231
MwoI GCNNNNNNNGC 3 cut(s) 2456, 2499, 2603
NcoI CCATGG 3 cut(s) 660, 804, 1575
NdeII GATC 8 cut(s) 265, 403, 457, 889, 1667, 1972, 2101, 2116
NlaIII CATG 8 cut(s) 69, 155, 664, 808, 1579, 1967, 2386, 2654
NlaIV GGNNCC 4 cut(s) 364, 386, 508, 1769
NmeAIII GCCGAG 1 cut(s) 1685
NmuCI GTSAC 1 cut(s) 2162
NsiI ATGCAT 1 cut(s) 71
NspI RCATGY 1 cut(s) 2386
OliI CACNNNNGTG 2 cut(s) 573, 1005
PagI TCATGA 1 cut(s) 1963
PdmI GAANNNNTTC 1 cut(s) 238
PfeI GAWTC 4 cut(s) 691, 835, 979, 2141
PflMI CCANNNNNTGG 1 cut(s) 308
PinAI ACCGGT 1 cut(s) 77
PkrI GCNGC 2 cut(s) 1909, 2461
PleI GAGTC 2 cut(s) 469, 1760
PpsI GAGTC 2 cut(s) 469, 1760
Psp6I CCWGG 1 cut(s) 229
PspGI CCWGG 1 cut(s) 229
PspN4I GGNNCC 4 cut(s) 364, 386, 508, 1769
PspPI GGNCC 6 cut(s) 75, 506, 938, 1709, 2429, 2548
PsuI RGATCY 3 cut(s) 403, 889, 1972
RsaI GTAC 3 cut(s) 5, 16, 490
RsaNI GTAC 3 cut(s) 4, 15, 489
RseI CAYNNNNRTG 5 cut(s) 515, 573, 1005, 1704, 2649
SaqAI TTAA 6 cut(s) 1889, 2024, 2088, 2240, 2271, 2331
SatI GCNGC 2 cut(s) 1908, 2460
Sau3AI GATC 8 cut(s) 265, 403, 457, 889, 1667, 1972, 2101, 2116
Sau96I GGNCC 6 cut(s) 75, 506, 938, 1709, 2429, 2548
ScaI AGTACT 1 cut(s) 16
SchI GAGTC 2 cut(s) 469, 1761
ScrFI CCNGG 1 cut(s) 231
SduI GDGCHC 2 cut(s) 707, 995
SfaNI GCATC 3 cut(s) 426, 858, 2653
SinI GGWCC 4 cut(s) 75, 1709, 2429, 2548
SmiMI CAYNNNNRTG 5 cut(s) 515, 573, 1005, 1704, 2649
SmlI CTYRAG 6 cut(s) 556, 844, 988, 1132, 1276, 1420
SmoI CTYRAG 6 cut(s) 556, 844, 988, 1132, 1276, 1420
SsiI CCGC 5 cut(s) 299, 1032, 1176, 1320, 1464
SspMI CTAG 9 cut(s) 177, 273, 839, 1127, 1271, 1415, 2105, 2258, 2603
StyD4I CCNGG 1 cut(s) 229
StyI CCWWGG 3 cut(s) 660, 804, 1575
TaaI ACNGT 1 cut(s) 866
TaiI ACGT 1 cut(s) 2661
TaqI TCGA 1 cut(s) 248
TaqII GACCGA 1 cut(s) 2198
TatI WGTACW 1 cut(s) 14
TfiI GAWTC 4 cut(s) 691, 835, 979, 2141
Tru1I TTAA 6 cut(s) 1889, 2024, 2088, 2240, 2271, 2331
Tru9I TTAA 6 cut(s) 1889, 2024, 2088, 2240, 2271, 2331
TscAI CASTG 7 cut(s) 436, 580, 724, 1012, 1156, 1300, 1444
TseFI GTSAC 1 cut(s) 2162
TseI GCWGC 2 cut(s) 1907, 2459
Tsp45I GTSAC 1 cut(s) 2162
TspDTI ATGAA 4 cut(s) 168, 1952, 2350, 2599
TspGWI ACGGA 2 cut(s) 476, 1745
TspRI CASTG 7 cut(s) 436, 580, 724, 1012, 1156, 1300, 1444
Van91I CCANNNNNTGG 1 cut(s) 308
VpaK11BI GGWCC 4 cut(s) 75, 1709, 2429, 2548
XapI RAATTY 6 cut(s) 155, 1721, 1885, 1959, 2132, 2188
XbaI TCTAGA 4 cut(s) 1126, 1270, 1414, 2104
XceI RCATGY 1 cut(s) 2386
XmiI GTMKAC 1 cut(s) 136
XmnI GAANNNNTTC 1 cut(s) 238
XspI CTAG 9 cut(s) 177, 273, 839, 1127, 1271, 1415, 2105, 2258, 2603
ZrmI AGTACT 1 cut(s) 16
Zsp2I ATGCAT 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.