Rmu_sc0000255.1_g000037

MO25-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000255.1
N/A
Physical Location & Seq
Reverse (-)
198868 .. 199493
626 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 315 bp
atgaagggtctcttcaagtctaagccccgcacgccggccgacgtcgtccagacccgcgatgtcctcatctatgctcagcgcagcaccgattcccgcgagagcaagcgcgaggaaaagatggcagagctttgtaagaacattatggagttgaagtgtattctctatggcaatagtgagtcagatccctgtgcacaattgacacaggagtttttcagagagaacacgcttcggcttctcatcatgcgtgttccgaaattaaacttggaggcaaggaaagatgtcactcaagttgttgccaatctacagaggcaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko04150 ko04152 map04150 map04152
Pfam Domains
Protein Families
Mo25

Protein Analysis

104

Amino Acids

12.1

Weight (kDa)

9.33

Isoelectric Point (pI)

41.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mo25 PF08569 4 - 104 5.3e-20 Mo25-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 45
AccII CGCG 3 cut(s) 57, 96, 108
AciI CCGC 3 cut(s) 28, 55, 94
AclWI GGATC 1 cut(s) 176
AcoI YGGCCR 1 cut(s) 36
AcyI GRCGYC 1 cut(s) 42
AfiI CCNNNNNNNGG 1 cut(s) 34
AgsI TTSAA 2 cut(s) 16, 151
AjuI GAANNNNNNNTTGG 2 cut(s) 245, 277
AluBI AGCT 1 cut(s) 127
AluI AGCT 1 cut(s) 127
Alw21I GWGCWC 1 cut(s) 193
Alw26I GTCTC 1 cut(s) 14
Alw44I GTGCAC 1 cut(s) 189
AlwI GGATC 1 cut(s) 176
AoxI GGCC 1 cut(s) 36
ApaLI GTGCAC 1 cut(s) 189
ApeKI GCWGC 1 cut(s) 81
AspLEI GCGC 2 cut(s) 81, 108
BaeGI GKGCMC 1 cut(s) 193
Bbv12I GWGCWC 1 cut(s) 193
BbvI GCAGC 1 cut(s) 93
BccI CCATC 1 cut(s) 112
BcoDI GTCTC 1 cut(s) 14
BfmI CTRYAG 1 cut(s) 302
BisI GCNGC 1 cut(s) 82
BlpI GCTNAGC 1 cut(s) 75
BlsI GCNGC 1 cut(s) 83
Bpu1102I GCTNAGC 1 cut(s) 75
BpuEI CTTGAG 1 cut(s) 270
BsaHI GRCGYC 1 cut(s) 42
BsaI GGTCTC 1 cut(s) 14
BsaXI ACNNNNNCTCC 2 cut(s) 137, 167
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse118I RCCGGY 1 cut(s) 34
BseLI CCNNNNNNNGG 1 cut(s) 34
BseMII CTCAG 1 cut(s) 89
BseSI GKGCMC 1 cut(s) 193
BseX3I CGGCCG 1 cut(s) 36
BseXI GCAGC 1 cut(s) 93
Bsh1236I CGCG 3 cut(s) 57, 96, 108
Bsh1285I CGRYCG 1 cut(s) 39
BshFI GGCC 1 cut(s) 38
BsiEI CGRYCG 1 cut(s) 39
BsiHKAI GWGCWC 1 cut(s) 193
BsiSI CCGG 1 cut(s) 35
BslI CCNNNNNNNGG 1 cut(s) 34
BsmAI GTCTC 1 cut(s) 14
BsnI GGCC 1 cut(s) 38
Bso31I GGTCTC 1 cut(s) 14
Bsp1286I GDGCHC 1 cut(s) 193
Bsp143I GATC 1 cut(s) 181
Bsp1720I GCTNAGC 1 cut(s) 75
BspACI CCGC 3 cut(s) 28, 55, 94
BspANI GGCC 1 cut(s) 38
BspCNI CTCAG 1 cut(s) 88
BspFNI CGCG 3 cut(s) 57, 96, 108
BspPI GGATC 1 cut(s) 176
BspTNI GGTCTC 1 cut(s) 14
BsrFI RCCGGY 1 cut(s) 34
BssAI RCCGGY 1 cut(s) 34
BssMI GATC 1 cut(s) 181
BssNI GRCGYC 1 cut(s) 42
Bst6I CTCTTC 1 cut(s) 17
BstACI GRCGYC 1 cut(s) 42
BstC8I GCNNGC 3 cut(s) 32, 36, 104
BstDEI CTNAG 2 cut(s) 21, 75
BstFNI CGCG 3 cut(s) 57, 96, 108
BstHHI GCGC 2 cut(s) 81, 108
BstKTI GATC 1 cut(s) 184
BstMAI GTCTC 1 cut(s) 14
BstMBI GATC 1 cut(s) 181
BstMCI CGRYCG 1 cut(s) 39
BstMWI GCNNNNNNNGC 1 cut(s) 31
BstSFI CTRYAG 1 cut(s) 302
BstSLI GKGCMC 1 cut(s) 193
BstUI CGCG 3 cut(s) 57, 96, 108
BstV1I GCAGC 1 cut(s) 93
BstX2I RGATCY 1 cut(s) 181
BstYI RGATCY 1 cut(s) 181
BstZI CGGCCG 1 cut(s) 36
BsuRI GGCC 1 cut(s) 38
BtgZI GCGATG 1 cut(s) 72
Cac8I GCNNGC 3 cut(s) 32, 36, 104
CfoI GCGC 2 cut(s) 81, 108
Cfr10I RCCGGY 1 cut(s) 34
CviAII CATG 1 cut(s) 241
CviJI RGCY 4 cut(s) 25, 38, 127, 232
CviKI_1 RGCY 4 cut(s) 25, 38, 127, 232
DdeI CTNAG 2 cut(s) 21, 75
DpnI GATC 1 cut(s) 183
DpnII GATC 1 cut(s) 181
EaeI YGGCCR 1 cut(s) 36
EagI CGGCCG 1 cut(s) 36
Eam1104I CTCTTC 1 cut(s) 17
EarI CTCTTC 1 cut(s) 17
EclXI CGGCCG 1 cut(s) 36
Eco31I GGTCTC 1 cut(s) 14
Eco52I CGGCCG 1 cut(s) 36
FaeI CATG 1 cut(s) 244
FaiI YATR 4 cut(s) 72, 143, 165, 242
FalI AAGNNNNNCTT 1 cut(s) 28
FatI CATG 1 cut(s) 240
FauI CCCGC 3 cut(s) 35, 62, 101
Fnu4HI GCNGC 1 cut(s) 82
Fsp4HI GCNGC 1 cut(s) 82
GlaI GCGC 2 cut(s) 80, 107
GluI GCNGC 1 cut(s) 82
HaeIII GGCC 1 cut(s) 38
HapII CCGG 1 cut(s) 35
HhaI GCGC 2 cut(s) 81, 108
Hin1I GRCGYC 1 cut(s) 42
Hin1II CATG 1 cut(s) 244
Hin6I GCGC 2 cut(s) 79, 106
HinP1I GCGC 2 cut(s) 79, 106
HinfI GANTC 2 cut(s) 89, 176
HpaII CCGG 1 cut(s) 35
Hpy166II GTNNAC 1 cut(s) 191
Hpy188I TCNGA 3 cut(s) 181, 215, 252
Hpy188III TCNNGA 1 cut(s) 49
Hpy8I GTNNAC 1 cut(s) 191
Hpy99I CGWCG 2 cut(s) 44, 47
HpyCH4IV ACGT 1 cut(s) 42
HpyCH4V TGCA 1 cut(s) 191
HpyF10VI GCNNNNNNNGC 1 cut(s) 31
HpyF3I CTNAG 2 cut(s) 21, 75
HpySE526I ACGT 1 cut(s) 42
Hsp92I GRCGYC 1 cut(s) 42
Hsp92II CATG 1 cut(s) 244
HspAI GCGC 2 cut(s) 79, 106
KroI GCCGGC 1 cut(s) 34
KroNI GCCGGC 1 cut(s) 36
Kzo9I GATC 1 cut(s) 181
LpnPI CCDG 4 cut(s) 48, 62, 188, 199
Lsp1109I GCAGC 1 cut(s) 93
MaeII ACGT 1 cut(s) 42
MaeIII GTNAC 1 cut(s) 280
MalI GATC 1 cut(s) 183
MboI GATC 1 cut(s) 181
MboII GAAGA 1 cut(s) 4
MfeI CAATTG 1 cut(s) 194
MflI RGATCY 1 cut(s) 181
MhlI GDGCHC 1 cut(s) 193
MluCI AATT 2 cut(s) 194, 254
MlyI GAGTC 1 cut(s) 185
MnlI CCTC 4 cut(s) 74, 103, 259, 300
MroNI GCCGGC 1 cut(s) 34
MseI TTAA 1 cut(s) 257
MspI CCGG 1 cut(s) 35
MunI CAATTG 1 cut(s) 194
MvnI CGCG 3 cut(s) 57, 96, 108
MwoI GCNNNNNNNGC 1 cut(s) 31
NaeI GCCGGC 1 cut(s) 36
NdeII GATC 1 cut(s) 181
NgoMIV GCCGGC 1 cut(s) 34
NlaIII CATG 1 cut(s) 244
NmuCI GTSAC 1 cut(s) 280
PdiI GCCGGC 1 cut(s) 36
PfeI GAWTC 1 cut(s) 89
PflFI GACNNNGTC 1 cut(s) 44
PkrI GCNGC 1 cut(s) 83
PleI GAGTC 1 cut(s) 184
PpsI GAGTC 1 cut(s) 184
PsuI RGATCY 1 cut(s) 181
PsyI GACNNNGTC 1 cut(s) 44
SaqAI TTAA 1 cut(s) 257
SatI GCNGC 1 cut(s) 82
Sau3AI GATC 1 cut(s) 181
SchI GAGTC 1 cut(s) 185
SduI GDGCHC 1 cut(s) 193
SetI ASST 2 cut(s) 45, 129
SfcI CTRYAG 1 cut(s) 302
SmlI CTYRAG 1 cut(s) 285
SmoI CTYRAG 1 cut(s) 285
Sse9I AATT 2 cut(s) 194, 254
SsiI CCGC 3 cut(s) 28, 55, 94
TaiI ACGT 1 cut(s) 45
TasI AATT 2 cut(s) 194, 254
TfiI GAWTC 1 cut(s) 89
Tru1I TTAA 1 cut(s) 257
Tru9I TTAA 1 cut(s) 257
TseFI GTSAC 1 cut(s) 280
TseI GCWGC 1 cut(s) 81
Tsp45I GTSAC 1 cut(s) 280
TspDTI ATGAA 1 cut(s) 17
Tth111I GACNNNGTC 1 cut(s) 44
VneI GTGCAC 1 cut(s) 189
ZraI GACGTC 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.