Rmu_sc0000431.1_g000016

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000431.1
N/A
Physical Location & Seq
Reverse (-)
105567 .. 109747
4181 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000431.1_g000016.1.cds

Sequence Viewer

Length: 2097 bp
atggcaacacaaaccaaccttaacatcaccacagaccggtctgctcttcttgctctcaaagcccgtatcaccaatgaccctcgaaacatagtcttcaccaactggtcaaccacaacccctgtttgtaactgggttggagtcacttgtgaaattccaaatgagatcggcactttgaatcatttggaaatattgtctgtggaacacaatgccttaaaagggcctatccctatgactatcttcaacatgtcatctttgactattgtagctttccatggcaacagtttgaatggtagaattcctgacaatatttgtcaaaatctttcgaatattcaagagttgtatttgggtgccaaccagtttaatggtccacttccttccatgtttgggcaatgcaaacaacttcttcaattaggcttgggggataacaacttgacaggtcctataccatatgagattggttatcttccaaatttagagaaattgtcgctcagttctaataatctaaatggccatatcccatcctcaatcttcaatatctccacaataacagtattagttctcagcctcaatcagcttttaggtagcctcccagcagacataggccttgcgcttccaaaactagaagcgtttgacgcaacagagaatcgcctcagtggagtaatccccaaatccatctataatgcttctgagcttcggattctagaactgggaggtaactctttttctggatttattccaagcactctgtgccttttgacaaaccttgaatttctcgaattggtcggaacaaatttgaccattgatacctctactccagaagttaatattttttcttgtctggcaaatcttagaaatttgaggtttttagcctcgcaaagcagtccattaaattccaagcttccgatttccttcagtaatttctctacatcacttgaatatctttatttagcatattgcaacttgagaggtaacatccccagtgacatagggaatttgagtagcttgataaagttatccctcggtacgaatcaattgagcgggccaattccaatctcaatgggaagactacataatcttcaaggtttgtatatttatgataacacattgcaaggatacattccagatgagctttgtcaactagaacacttgagtgatttgaatttgggtgggaatcaactctctggttctgtaccttcttgcttgggtaatctaacagcatctctaagaggactatacttagagtccaatttgttgaattccacaataccatctaccttgtggggacttacagatatcttggaactatacttgtcatccaattctctaattggacctctatcaggtgctgttggtaatttgaaagttgctatagacatagatgtatcatacaaccaattatctgggagtataacaagtagcattgggagtttagtgagtttggtcagtctctccttagcacataacaatctagaaggccctgttcctagttcctttgtagattgtgtaagcttagaaggattggatttatctcgaaatagtttcactggaaggttggatataatgatagatgttgcatcggcattggagtaccttcatcatggttatgaagtacctattgtccattgtgatttgaagccaagcaacatcctactagatgatgatatggttgcacatgttgctgattttggtattgcgagactcctttgtggaggagattctatgactcaaaccatgaccttggccacaattgggtatatggctccagtgatggaaacattcacaagaaggaagccaaccgatgagatcttctctggggaaatgagactaaatcaatggattgcaaatttcctagttgcagatgcgatagttgaagttgtggatgctagtttacttggaagcgaggaggctcatgacttcgtgagcaagagggagtgcttatcatccattatgagattagctgttgcttgttcggctgaatcaccggaagagaggataaacatgcaagaggctgtagccatgcttaaaacaatcaagatcaagttttcaaaggactctgctgcaagaagtgtggtggtgaaccgtcgtcctgtttcgtaa

Protein Analysis

698

Amino Acids

75.51

Weight (kDa)

4.88

Isoelectric Point (pI)

34.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 347
AccBSI CCGCTC 1 cut(s) 1038
AciI CCGC 1 cut(s) 1038
AcoI YGGCCR 2 cut(s) 508, 1740
AcuI CTGAAG 1 cut(s) 895
AdeI CACNNNGTG 1 cut(s) 747
AfaI GTAC 4 cut(s) 1024, 1191, 1589, 1611
AfiI CCNNNNNNNGG 5 cut(s) 36, 216, 384, 1340, 1749
AflIII ACRYGT 2 cut(s) 243, 1672
AgeI ACCGGT 1 cut(s) 36
AleI CACNNNNGTG 1 cut(s) 1149
AluBI AGCT 8 cut(s) 266, 574, 691, 898, 1002, 1129, 1509, 1958
AluI AGCT 8 cut(s) 266, 574, 691, 898, 1002, 1129, 1509, 1958
Alw26I GTCTC 3 cut(s) 1451, 1690, 1816
AlwNI CAGNNNCTG 1 cut(s) 1346
AoxI GGCC 6 cut(s) 218, 508, 601, 1040, 1474, 1740
ApeKI GCWGC 1 cut(s) 2057
AsiGI ACCGGT 1 cut(s) 36
AspLEI GCGC 1 cut(s) 610
AspS9I GGNCC 6 cut(s) 218, 365, 437, 1040, 1331, 1475
AsuHPI GGTGA 5 cut(s) 19, 61, 88, 1971, 2086
AsuII TTCGAA 1 cut(s) 323
AvaII GGWCC 3 cut(s) 365, 437, 1331
BalI TGGCCA 2 cut(s) 510, 1742
BanI GGYRCC 1 cut(s) 347
BbsI GAAGAC 2 cut(s) 85, 1069
BbvI GCAGC 1 cut(s) 2044
BccI CCATC 4 cut(s) 526, 680, 1276, 1762
BciVI GTATCC 1 cut(s) 1106
BcoDI GTCTC 3 cut(s) 1451, 1690, 1816
BfaI CTAG 8 cut(s) 620, 701, 1139, 1469, 1485, 1652, 1850, 1884
BfmI CTRYAG 2 cut(s) 1368, 2010
BfuI GTATCC 1 cut(s) 1106
BglII AGATCT 1 cut(s) 1803
BisI GCNGC 1 cut(s) 2058
BlsI GCNGC 1 cut(s) 2059
Bme18I GGWCC 3 cut(s) 365, 437, 1331
BmgT120I GGNCC 6 cut(s) 218, 365, 437, 1040, 1331, 1475
BmiI GGNNCC 2 cut(s) 349, 1761
BmrI ACTGGG 3 cut(s) 139, 716, 972
BmsI GCATC 4 cut(s) 1226, 1583, 1849, 1870
BmuI ACTGGG 3 cut(s) 139, 716, 972
BpiI GAAGAC 2 cut(s) 85, 1069
BplI GAGNNNNNCTC 2 cut(s) 1793, 1825
BpmI CTGGAG 2 cut(s) 798, 1746
Bpu10I CCTNAGC 1 cut(s) 1453
Bpu14I TTCGAA 1 cut(s) 323
BpuEI CTTGAG 2 cut(s) 982, 1168
BsaJI CCNNGG 3 cut(s) 271, 1018, 1737
BsaWI WCCGGW 2 cut(s) 36, 1981
BsaXI ACNNNNNCTCC 2 cut(s) 796, 826
Bsc4I CCNNNNNNNGG 5 cut(s) 36, 216, 384, 1340, 1749
Bse118I RCCGGY 1 cut(s) 36
Bse1I ACTGG 7 cut(s) 107, 134, 355, 711, 978, 1549, 1763
Bse3DI GCAATG 2 cut(s) 395, 1103
BseDI CCNNGG 3 cut(s) 271, 1018, 1737
BseGI GGATG 6 cut(s) 518, 972, 1313, 1644, 1885, 1940
BseLI CCNNNNNNNGG 5 cut(s) 36, 216, 384, 1340, 1749
BseMI GCAATG 2 cut(s) 395, 1103
BseMII CTCAG 4 cut(s) 502, 574, 664, 678
BseNI ACTGG 7 cut(s) 107, 134, 355, 711, 978, 1549, 1763
BseRI GAGGAG 2 cut(s) 1725, 1916
BseXI GCAGC 1 cut(s) 2044
BseYI CCCAGC 1 cut(s) 589
BshFI GGCC 6 cut(s) 220, 510, 603, 1042, 1476, 1742
BshNI GGYRCC 1 cut(s) 347
BshTI ACCGGT 1 cut(s) 36
BsiSI CCGG 2 cut(s) 37, 1982
BslFI GGGAC 1 cut(s) 1296
BslI CCNNNNNNNGG 5 cut(s) 36, 216, 384, 1340, 1749
BsmAI GTCTC 3 cut(s) 1451, 1690, 1816
BsmFI GGGAC 1 cut(s) 1296
BsnI GGCC 6 cut(s) 220, 510, 603, 1042, 1476, 1742
Bsp119I TTCGAA 1 cut(s) 323
Bsp143I GATC 3 cut(s) 162, 1803, 2034
Bsp19I CCATGG 1 cut(s) 271
BspACI CCGC 1 cut(s) 1038
BspANI GGCC 6 cut(s) 220, 510, 603, 1042, 1476, 1742
BspCNI CTCAG 4 cut(s) 501, 573, 663, 679
BspHI TCATGA 1 cut(s) 1909
BspLI GGNNCC 2 cut(s) 349, 1761
BspQI GCTCTTC 1 cut(s) 51
BspT104I TTCGAA 1 cut(s) 323
BspT107I GGYRCC 1 cut(s) 347
BsrBI CCGCTC 1 cut(s) 1038
BsrDI GCAATG 2 cut(s) 395, 1103
BsrFI RCCGGY 1 cut(s) 36
BsrI ACTGG 7 cut(s) 107, 134, 355, 711, 978, 1549, 1763
BssAI RCCGGY 1 cut(s) 36
BssECI CCNNGG 3 cut(s) 271, 1018, 1737
BssMI GATC 3 cut(s) 162, 1803, 2034
BssT1I CCWWGG 2 cut(s) 271, 1737
Bst4CI ACNGT 3 cut(s) 281, 550, 2081
Bst6I CTCTTC 2 cut(s) 51, 1980
BstAPI GCANNNNNTGC 2 cut(s) 747, 1676
BstBI TTCGAA 1 cut(s) 323
BstC8I GCNNGC 1 cut(s) 1040
BstDEI CTNAG 9 cut(s) 488, 560, 650, 687, 848, 1223, 1237, 1453, 1510
BstDSI CCRYGG 1 cut(s) 271
BstENI CCTNNNNNAGG 1 cut(s) 1338
BstF5I GGATG 6 cut(s) 518, 972, 1313, 1644, 1885, 1940
BstHHI GCGC 1 cut(s) 610
BstKTI GATC 3 cut(s) 165, 1806, 2037
BstMAI GTCTC 3 cut(s) 1451, 1690, 1816
BstMBI GATC 3 cut(s) 162, 1803, 2034
BstMWI GCNNNNNNNGC 6 cut(s) 50, 59, 632, 747, 1676, 1970
BstNSI RCATGY 3 cut(s) 247, 1676, 2002
BstSFI CTRYAG 2 cut(s) 1368, 2010
BstV1I GCAGC 1 cut(s) 2044
BstV2I GAAGAC 2 cut(s) 85, 1069
BstX2I RGATCY 1 cut(s) 1803
BstXI CCANNNNNNTGG 3 cut(s) 362, 1400, 1738
BstYI RGATCY 1 cut(s) 1803
BsuI GTATCC 1 cut(s) 1106
BsuRI GGCC 6 cut(s) 220, 510, 603, 1042, 1476, 1742
BtgI CCRYGG 1 cut(s) 271
BtsCI GGATG 6 cut(s) 518, 972, 1313, 1644, 1885, 1940
BtsIMutI CAGTG 4 cut(s) 658, 985, 1542, 1770
Cac8I GCNNGC 1 cut(s) 1040
CaiI CAGNNNCTG 1 cut(s) 1346
CciI TCATGA 1 cut(s) 1909
CfoI GCGC 1 cut(s) 610
Cfr10I RCCGGY 1 cut(s) 36
Cfr13I GGNCC 6 cut(s) 218, 365, 437, 1040, 1331, 1475
CseI GACGC 1 cut(s) 641
Csp6I GTAC 4 cut(s) 1023, 1190, 1588, 1610
CspAI ACCGGT 1 cut(s) 36
CspCI CAANNNNNGTGG 2 cut(s) 2049, 2084
CviAII CATG 9 cut(s) 244, 272, 379, 1598, 1673, 1732, 1910, 1999, 2017
CviQI GTAC 4 cut(s) 1023, 1190, 1588, 1610
DdeI CTNAG 9 cut(s) 488, 560, 650, 687, 848, 1223, 1237, 1453, 1510
DpnI GATC 3 cut(s) 164, 1805, 2036
DpnII GATC 3 cut(s) 162, 1803, 2034
DraIII CACNNNGTG 1 cut(s) 747
EaeI YGGCCR 2 cut(s) 508, 1740
Eam1104I CTCTTC 2 cut(s) 51, 1980
EarI CTCTTC 2 cut(s) 51, 1980
Eco130I CCWWGG 2 cut(s) 271, 1737
Eco147I AGGCCT 1 cut(s) 603
Eco32I GATATC 1 cut(s) 1294
Eco47I GGWCC 3 cut(s) 365, 437, 1331
Eco57I CTGAAG 1 cut(s) 895
EcoNI CCTNNNNNAGG 1 cut(s) 1338
EcoO109I RGGNCCY 3 cut(s) 218, 437, 1475
EcoRI GAATTC 2 cut(s) 294, 1255
EcoRV GATATC 1 cut(s) 1294
EcoT14I CCWWGG 2 cut(s) 271, 1737
ErhI CCWWGG 2 cut(s) 271, 1737
FaeI CATG 9 cut(s) 247, 275, 382, 1601, 1676, 1735, 1913, 2002, 2020
FaqI GGGAC 1 cut(s) 1296
FatI CATG 9 cut(s) 243, 271, 378, 1597, 1672, 1731, 1909, 1998, 2016
FauI CCCGC 1 cut(s) 1031
FauNDI CATATG 1 cut(s) 448
Fnu4HI GCNGC 1 cut(s) 2058
FokI GGATG 6 cut(s) 505, 959, 1300, 1631, 1892, 1927
Fsp4HI GCNGC 1 cut(s) 2058
FspBI CTAG 8 cut(s) 620, 701, 1139, 1469, 1485, 1652, 1850, 1884
GlaI GCGC 1 cut(s) 609
GluI GCNGC 1 cut(s) 2058
GsaI CCCAGC 1 cut(s) 593
GsuI CTGGAG 2 cut(s) 798, 1746
HaeIII GGCC 6 cut(s) 220, 510, 603, 1042, 1476, 1742
HapII CCGG 2 cut(s) 37, 1982
HgaI GACGC 1 cut(s) 641
HhaI GCGC 1 cut(s) 610
Hin1II CATG 9 cut(s) 247, 275, 382, 1601, 1676, 1735, 1913, 2002, 2020
Hin6I GCGC 1 cut(s) 608
HinP1I GCGC 1 cut(s) 608
HincII GTYRAC 2 cut(s) 108, 1136
HindII GTYRAC 2 cut(s) 108, 1136
HindIII AAGCTT 2 cut(s) 896, 1507
HpaII CCGG 2 cut(s) 37, 1982
HphI GGTGA 5 cut(s) 19, 61, 88, 1971, 2086
Hpy166II GTNNAC 5 cut(s) 108, 368, 1136, 1889, 2077
Hpy188I TCNGA 4 cut(s) 688, 696, 785, 903
Hpy8I GTNNAC 5 cut(s) 108, 368, 1136, 1889, 2077
Hpy99I CGWCG 1 cut(s) 2085
HpyAV CCTTC 8 cut(s) 384, 919, 1203, 1466, 1508, 1542, 1601, 1779
HpyCH4III ACNGT 3 cut(s) 281, 550, 2081
HpyCH4V TGCA 9 cut(s) 393, 957, 1108, 1574, 1670, 1841, 1856, 2002, 2060
HpyF10VI GCNNNNNNNGC 6 cut(s) 50, 59, 632, 747, 1676, 1970
HpyF3I CTNAG 9 cut(s) 488, 560, 650, 687, 848, 1223, 1237, 1453, 1510
Hsp92II CATG 9 cut(s) 247, 275, 382, 1601, 1676, 1735, 1913, 2002, 2020
HspAI GCGC 1 cut(s) 608
Kzo9I GATC 3 cut(s) 162, 1803, 2034
LguI GCTCTTC 1 cut(s) 51
LmnI GCTCC 1 cut(s) 1765
Lsp1109I GCAGC 1 cut(s) 2044
LweI GCATC 4 cut(s) 1226, 1583, 1849, 1870
MaeI CTAG 8 cut(s) 620, 701, 1139, 1469, 1485, 1652, 1850, 1884
MaeIII GTNAC 5 cut(s) 125, 139, 713, 968, 980
MalI GATC 3 cut(s) 164, 1805, 2036
MbiI CCGCTC 1 cut(s) 1038
MboI GATC 3 cut(s) 162, 1803, 2034
MfeI CAATTG 2 cut(s) 1031, 1746
MflI RGATCY 1 cut(s) 1803
MlsI TGGCCA 2 cut(s) 510, 1742
MluNI TGGCCA 2 cut(s) 510, 1742
MlyI GAGTC 5 cut(s) 147, 1250, 1692, 1717, 2045
MmeI TCCRAC 3 cut(s) 115, 763, 1533
Mox20I TGGCCA 2 cut(s) 510, 1742
MscI TGGCCA 2 cut(s) 510, 1742
MseI TTAA 6 cut(s) 21, 212, 360, 822, 887, 2022
MslI CAYNNNNRTG 2 cut(s) 1149, 1602
Msp20I TGGCCA 2 cut(s) 510, 1742
MspI CCGG 2 cut(s) 37, 1982
MunI CAATTG 2 cut(s) 1031, 1746
MwoI GCNNNNNNNGC 6 cut(s) 50, 59, 632, 747, 1676, 1970
NcoI CCATGG 1 cut(s) 271
NdeI CATATG 1 cut(s) 448
NdeII GATC 3 cut(s) 162, 1803, 2034
NlaIII CATG 9 cut(s) 247, 275, 382, 1601, 1676, 1735, 1913, 2002, 2020
NlaIV GGNNCC 2 cut(s) 349, 1761
NmuCI GTSAC 2 cut(s) 139, 980
NspI RCATGY 3 cut(s) 247, 1676, 2002
NspV TTCGAA 1 cut(s) 323
OliI CACNNNNGTG 1 cut(s) 1149
PagI TCATGA 1 cut(s) 1909
PceI AGGCCT 1 cut(s) 603
PciI ACATGT 2 cut(s) 243, 1672
PciSI GCTCTTC 1 cut(s) 51
PfeI GAWTC 7 cut(s) 175, 643, 697, 1027, 1171, 1715, 1976
PinAI ACCGGT 1 cut(s) 36
PkrI GCNGC 1 cut(s) 2059
PleI GAGTC 5 cut(s) 146, 1249, 1692, 1717, 2045
PpsI GAGTC 5 cut(s) 146, 1249, 1692, 1717, 2045
PpuMI RGGWCCY 1 cut(s) 437
PscI ACATGT 2 cut(s) 243, 1672
Psp5II RGGWCCY 1 cut(s) 437
PspFI CCCAGC 1 cut(s) 589
PspN4I GGNNCC 2 cut(s) 349, 1761
PspPI GGNCC 6 cut(s) 218, 365, 437, 1040, 1331, 1475
PspPPI RGGWCCY 1 cut(s) 437
PstNI CAGNNNCTG 1 cut(s) 1346
PsuI RGATCY 1 cut(s) 1803
RsaI GTAC 4 cut(s) 1024, 1191, 1589, 1611
RsaNI GTAC 4 cut(s) 1023, 1190, 1588, 1610
RseI CAYNNNNRTG 2 cut(s) 1149, 1602
SapI GCTCTTC 1 cut(s) 51
SaqAI TTAA 6 cut(s) 21, 212, 360, 822, 887, 2022
SatI GCNGC 1 cut(s) 2058
Sau3AI GATC 3 cut(s) 162, 1803, 2034
Sau96I GGNCC 6 cut(s) 218, 365, 437, 1040, 1331, 1475
SchI GAGTC 5 cut(s) 147, 1250, 1692, 1717, 2045
SfaNI GCATC 4 cut(s) 1226, 1583, 1849, 1870
SfcI CTRYAG 2 cut(s) 1368, 2010
SfuI TTCGAA 1 cut(s) 323
SinI GGWCC 3 cut(s) 365, 437, 1331
SmiMI CAYNNNNRTG 2 cut(s) 1149, 1602
SmlI CTYRAG 2 cut(s) 961, 1147
SmoI CTYRAG 2 cut(s) 961, 1147
SseBI AGGCCT 1 cut(s) 603
SsiI CCGC 1 cut(s) 1038
SspI AATATT 4 cut(s) 189, 307, 328, 826
SspMI CTAG 8 cut(s) 620, 701, 1139, 1469, 1485, 1652, 1850, 1884
StuI AGGCCT 1 cut(s) 603
StyI CCWWGG 2 cut(s) 271, 1737
TaaI ACNGT 3 cut(s) 281, 550, 2081
TaqI TCGA 4 cut(s) 82, 323, 774, 1531
TfiI GAWTC 7 cut(s) 175, 643, 697, 1027, 1171, 1715, 1976
Tru1I TTAA 6 cut(s) 21, 212, 360, 822, 887, 2022
Tru9I TTAA 6 cut(s) 21, 212, 360, 822, 887, 2022
TscAI CASTG 4 cut(s) 658, 985, 1549, 1770
TseFI GTSAC 2 cut(s) 139, 980
TseI GCWGC 1 cut(s) 2057
Tsp45I GTSAC 2 cut(s) 139, 980
TspDTI ATGAA 2 cut(s) 1583, 1620
TspRI CASTG 4 cut(s) 658, 985, 1549, 1770
VpaK11BI GGWCC 3 cut(s) 365, 437, 1331
XagI CCTNNNNNAGG 1 cut(s) 1338
XbaI TCTAGA 2 cut(s) 700, 1468
XceI RCATGY 3 cut(s) 247, 1676, 2002
XcmI CCANNNNNNNNNTGG 1 cut(s) 1275
XspI CTAG 8 cut(s) 620, 701, 1139, 1469, 1485, 1652, 1850, 1884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.