Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000459.1

Orthogroup ID

OG0017654

Physical Location & Seq

Genomic Coordinates Forward (+)

41874 .. 45529

Gene Structure 3656 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2772 bp

atggacaacataagctttatagagactgacggtattcctgaatttgcgcacggccttaaaatcctgctgttcgatcatgacacattttccctcatgtacacagcatcagtgcttgaacaatactcattcaatgttactgcaatcgagcaggcatctgtcgctttgtccatgattagtgaacaaaaggatcactatgaactagtaatggctagcattaacatgtctgatattgagagtgtttcttttctgcatgcactgctcgagaaggatattcctgtcatattgatctcctctgaaatgaatgctgacatgaccaggaaagccctagacaaaggagcaagcattatccttgaaaaacccattcctttggaggatctgaaaaatgtgtggcgacacgtatacaggaagacaaacccaatggaggacataggtaaaccaaattgtgaagaaaagatagactggccaaaggactatcaagagtcttcagtgcttagaccttcctttgcaggtattgaaaccaaggaggatggtgcattgtgtaggcctgatacagggcattattggaatggcactggccttgaaactgatctagaaggtttggatagctatagcattgaagagttgttcccaacaaagagccgaaaacaaaaagcatctgggatgaagccagctgatgataccgaagaacaaggaaaacaaaaaaaattgaaactaactgtagagcaaactgattctgacagtatagccaggaatcagaaagggatctccaagaaacatagcaatgacaaaacagataagaaagaacgtattaattggacttcggacctgcatttcaagtttacaacagcaataagtgccttgggagatcagaaagctcgtcctaaagcgattatggacatgatgggtctggagaatttaacaatgcgccaggttgcaagccatcttcagaaatacaaaaatcaagtacggcgaattaacgagactggcatatttactggaagaagtagtttaagcaaagtttctggtgggaatgagtttgtgccagcaaagcaaagttctctggtataccagaagaaaccagggacttcaaggtttggagtaggaggtaaaccaacagaatcaactactccaaattctttgaccagaccttcgatctctgtagctagtttagacaatcatgactacagaatgcagaatctaaactcaagccatggaggcttgtctcgctacggaaataccaatagccccaatgattctctaagaactgatggttggtttcaaaatatgaaccagataccagaaacaagcagttttgtatgcaaaactggcatgaaggaaatattgaagaaaaaactgaaagtaactgaaaacttaccgggcatgacgtacatggcttcagaggttgatcctcccaacatgtcaaccaatacattccagctccccgatgagcctcctgccgtgcatcaaaagcaaaattgtactcctgctttgactgatcccttcaattccataaacaaggaaacaccaattgcaggaacaacagaagtgcttgagctacagaagatgaacctaccaagtatgaactactcgactccagaggtagattctcctcacatgtcggcacatgcatttcagttctcaaatgaggtttcagttgcgaatcaagagcaaaattgtactctaattgtaagtgctcccatgaactctgaaattcgggacgagttttcaacagaagatcaacgaagtgaattatttgagcccatgccaatgaatttaccaagtatgacaccagacagtgcttctgtgatccaagagcaatattatgctccagttaattcctccagttccgaaactcggaacagtttttcaacagaagttgcaggaacaaatgaactatttgagcttgtgctaaaggattcacctagtatggagtacatgactaaggaggatgcttctctccaaaaatcagaaaatgcatctcagctcccaaatgagcctctcggcatggacctacaacaataccgtactcctcatgagaacaagttttctgcgagaacaactgaacttgagtttctggcaaaagaaacaccttcacgcaatgctaacaatctagggaaccttccagcaaacttcaacgatggaagccagaagctggatactctagcaggagaggcacctcctgcaattttatcaaatgaccaccagcactatactccagttttcactgttccatttgctttccaaaatcagaacaaggtttctctagtagcaactgaacttcagcttctggaggagcaaacagcttcaagcaatgcaaaaaacttacagaacctcccaacaaaattcaacagtggaagccagaagctggatgctataacaggagaggcacctcctgcaatttcattaaatgagcaccagcactatactccatctttcaccattccattcgattcccaaaatcagaacaaggtttctccagtaacaactgaattgggggaacaaaaagcttcaagcaatgcaaaagatatagagaaccttccagtatacttcaacagtggaagccaggagctgaataatttaacaggagactctcctccagctatttcatcaaatgagcaccagccactgtcggagtatgctgacctgttgaaaatgcttgaagcagatccggagtacaattcttttggcaatgcaccttatgcaggcaattttgatgaataccgtgaatggctggagagatctttatttggagatagcacagaacaacattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

923

Amino Acids

102.84

Weight (kDa)

4.98

Isoelectric Point (pI)

48.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	21 - 128	7.5e-12	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017654)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g26570
malus_domestica	MD13G1034600.v1.1 MD16G1036100.v1.1
prunus_persica	Prupe.1G317900_v2.0.a1
rosa_laevigata	RLG00000006691
rosa_multiflora	Rmu_sc0000459.1_g000011
rosa_roxburghii	Rroxscaffold_5G00375600
rosa_samantha	Rh4AG330200 Rh4BG337800 Rh4CG353200 Rh4DG333800
rosa_wichuraiana	Rw4G028640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	48
Acc36I	ACCTGC	2 cut(s)	497, 834
AccB1I	GGYRCC	2 cut(s)	2173, 2386
AccB7I	CCANNNNNTGG	2 cut(s)	2152, 2365
AccI	GTMKAC	3 cut(s)	399, 1065, 2544
AccIII	TCCGGA	1 cut(s)	2668
AclWI	GGATC	7 cut(s)	195, 381, 770, 1400, 1490, 1801, 2660
AcoI	YGGCCR	1 cut(s)	461
AcsI	RAATTY	6 cut(s)	41, 913, 1132, 1710, 1771, 2342
AcuI	CTGAAG	4 cut(s)	468, 929, 1380, 2264
AfaI	GTAC	8 cut(s)	98, 966, 1388, 1480, 1678, 1934, 2026, 2675
AfiI	CCNNNNNNNGG	7 cut(s)	421, 551, 1532, 1854, 2152, 2365, 2702
AflIII	ACRYGT	4 cut(s)	219, 394, 1416, 1614
AhlI	ACTAGT	1 cut(s)	199
AjnI	CCWGG	5 cut(s)	314, 746, 927, 1078, 2562
AjuI	GAANNNNNNNTTGG	2 cut(s)	1255, 1287
Alw21I	GWGCWC	3 cut(s)	1696, 2415, 2619
Alw26I	GTCTC	4 cut(s)	17, 974, 1227, 2580
AlwI	GGATC	7 cut(s)	195, 381, 770, 1400, 1490, 1801, 2660
AlwNI	CAGNNNCTG	5 cut(s)	2152, 2287, 2365, 2569, 2626
Ama87I	CYCGRG	1 cut(s)	260
Aor13HI	TCCGGA	1 cut(s)	2668
AoxI	GGCC	4 cut(s)	52, 461, 542, 574
ApoI	RAATTY	6 cut(s)	41, 913, 1132, 1710, 1771, 2342
ArsI	GACNNNNNNTTYG	2 cut(s)	1132, 1164
AseI	ATTAAT	1 cut(s)	810
AspLEI	GCGC	2 cut(s)	49, 927
AspS9I	GGNCC	2 cut(s)	823, 2008
AsuC2I	CCSGG	1 cut(s)	1377
AsuHPI	GGTGA	2 cut(s)	1911, 2428
AsuNHI	GCTAGC	1 cut(s)	209
AvaI	CYCGRG	1 cut(s)	260
AvaII	GGWCC	2 cut(s)	823, 2008
BalI	TGGCCA	1 cut(s)	463
BanI	GGYRCC	2 cut(s)	2173, 2386
BanII	GRGCYC	1 cut(s)	1761
BbsI	GAAGAC	2 cut(s)	413, 474
Bbv12I	GWGCWC	3 cut(s)	1696, 2415, 2619
BccI	CCATC	6 cut(s)	521, 895, 948, 1262, 2132, 2437
BceAI	ACGGC	3 cut(s)	67, 983, 1442
BciT130I	CCWGG	5 cut(s)	316, 748, 929, 1080, 2564
BciVI	GTATCC	1 cut(s)	2149
BcnI	CCSGG	1 cut(s)	1377
BcoDI	GTCTC	4 cut(s)	17, 974, 1227, 2580
BcuI	ACTAGT	1 cut(s)	199
BfaI	CTAG	9 cut(s)	200, 210, 326, 590, 1164, 1923, 2111, 2162, 2264
BfmI	CTRYAG	5 cut(s)	607, 717, 1158, 1183, 1556
BfuAI	ACCTGC	2 cut(s)	497, 834
BfuI	GTATCC	1 cut(s)	2149
BglI	GCCNNNNNGGC	1 cut(s)	1215
BglII	AGATCT	1 cut(s)	2738
Bme1390I	CCNGG	6 cut(s)	316, 748, 929, 1080, 1377, 2564
Bme18I	GGWCC	2 cut(s)	823, 2008
BmeT110I	CYCGRG	1 cut(s)	260
BmgT120I	GGNCC	2 cut(s)	823, 2008
BmiI	GGNNCC	3 cut(s)	2117, 2175, 2388
BmrFI	CCNGG	6 cut(s)	316, 748, 929, 1080, 1377, 2564
BmsI	GCATC	7 cut(s)	113, 161, 662, 1471, 1939, 1985, 2359
BmtI	GCTAGC	1 cut(s)	213
BpiI	GAAGAC	2 cut(s)	413, 474
BpmI	CTGGAG	9 cut(s)	929, 1578, 1812, 1825, 2199, 2309, 2460, 2580, 2753
BpuEI	CTTGAG	3 cut(s)	1189, 1571, 2087
BpuMI	CCSGG	1 cut(s)	1377
BsaAI	YACGTR	1 cut(s)	397
BsaJI	CCNNGG	4 cut(s)	519, 858, 1079, 1210
BsaWI	WCCGGW	1 cut(s)	2668
BsaXI	ACNNNNNCTCC	2 cut(s)	2316, 2346
Bsc4I	CCNNNNNNNGG	7 cut(s)	421, 551, 1532, 1854, 2152, 2365, 2702
Bse3DI	GCAATG	5 cut(s)	787, 2104, 2317, 2521, 2695
BseAI	TCCGGA	1 cut(s)	2668
BseBI	CCWGG	5 cut(s)	316, 748, 929, 1080, 2564
BseDI	CCNNGG	4 cut(s)	519, 858, 1079, 1210
BseGI	GGATG	4 cut(s)	532, 666, 1954, 2374
BseLI	CCNNNNNNNGG	7 cut(s)	421, 551, 1532, 1854, 2152, 2365, 2702
BseMI	GCAATG	5 cut(s)	787, 2104, 2317, 2521, 2695
BseMII	CTCAG	1 cut(s)	1994
BseRI	GAGGAG	5 cut(s)	280, 1599, 2019, 2306, 2583
BshFI	GGCC	4 cut(s)	54, 463, 544, 576
BshNI	GGYRCC	2 cut(s)	2173, 2386
BsiHKAI	GWGCWC	3 cut(s)	1696, 2415, 2619
BsiHKCI	CYCGRG	1 cut(s)	260
BsiSI	CCGG	2 cut(s)	1376, 2669
BslFI	GGGAC	2 cut(s)	1096, 1730
BslI	CCNNNNNNNGG	7 cut(s)	421, 551, 1532, 1854, 2152, 2365, 2702
BsmAI	GTCTC	4 cut(s)	17, 974, 1227, 2580
BsmFI	GGGAC	2 cut(s)	1096, 1730
BsmI	GAATGC	2 cut(s)	307, 1194
BsnI	GGCC	4 cut(s)	54, 463, 544, 576
BsoBI	CYCGRG	1 cut(s)	260
Bsp1286I	GDGCHC	4 cut(s)	1696, 1761, 2415, 2619
Bsp13I	TCCGGA	1 cut(s)	2668
Bsp1407I	TGTACA	1 cut(s)	96
Bsp19I	CCATGG	1 cut(s)	1210
BspANI	GGCC	4 cut(s)	54, 463, 544, 576
BspCNI	CTCAG	1 cut(s)	1993
BspEI	TCCGGA	1 cut(s)	2668
BspHI	TCATGA	3 cut(s)	76, 1177, 2032
BspLI	GGNNCC	3 cut(s)	2117, 2175, 2388
BspMI	ACCTGC	2 cut(s)	497, 834
BspOI	GCTAGC	1 cut(s)	213
BspPI	GGATC	7 cut(s)	195, 381, 770, 1400, 1490, 1801, 2660
BspT107I	GGYRCC	2 cut(s)	2173, 2386
BsrDI	GCAATG	5 cut(s)	787, 2104, 2317, 2521, 2695
BsrGI	TGTACA	1 cut(s)	96
BssECI	CCNNGG	4 cut(s)	519, 858, 1079, 1210
BssNAI	GTATAC	3 cut(s)	400, 1066, 2545
BssT1I	CCWWGG	3 cut(s)	519, 858, 1210
Bst1107I	GTATAC	3 cut(s)	400, 1066, 2545
Bst2UI	CCWGG	5 cut(s)	316, 748, 929, 1080, 2564
Bst6I	CTCTTC	1 cut(s)	612
BstAPI	GCANNNNNTGC	5 cut(s)	256, 854, 2180, 2393, 2699
BstAUI	TGTACA	1 cut(s)	96
BstBAI	YACGTR	1 cut(s)	397
BstC8I	GCNNGC	8 cut(s)	150, 211, 252, 340, 669, 937, 1044, 2704
BstDEI	CTNAG	4 cut(s)	491, 1259, 1941, 1980
BstDSI	CCRYGG	1 cut(s)	1210
BstENI	CCTNNNNNAGG	2 cut(s)	549, 2700
BstF5I	GGATG	4 cut(s)	532, 666, 1954, 2374
BstHHI	GCGC	2 cut(s)	49, 927
BstMAI	GTCTC	4 cut(s)	17, 974, 1227, 2580
BstNI	CCWGG	5 cut(s)	316, 748, 929, 1080, 2564
BstNSI	RCATGY	5 cut(s)	223, 254, 1420, 1618, 1628
BstSCI	CCNGG	6 cut(s)	314, 746, 927, 1078, 1375, 2562
BstSFI	CTRYAG	5 cut(s)	607, 717, 1158, 1183, 1556
BstV2I	GAAGAC	2 cut(s)	413, 474
BstX2I	RGATCY	4 cut(s)	373, 762, 2665, 2738
BstXI	CCANNNNNNTGG	1 cut(s)	367
BstYI	RGATCY	4 cut(s)	373, 762, 2665, 2738
BstZ17I	GTATAC	3 cut(s)	400, 1066, 2545
BsuI	GTATCC	1 cut(s)	2149
BsuRI	GGCC	4 cut(s)	54, 463, 544, 576
BtgI	CCRYGG	1 cut(s)	1210
BtsCI	GGATG	4 cut(s)	532, 666, 1954, 2374
BtsI	GCAGTG	1 cut(s)	254
BtsIMutI	CAGTG	9 cut(s)	114, 254, 492, 570, 1801, 2223, 2356, 2560, 2624
BveI	ACCTGC	2 cut(s)	497, 834
Cac8I	GCNNGC	8 cut(s)	150, 211, 252, 340, 669, 937, 1044, 2704
CaiI	CAGNNNCTG	5 cut(s)	2152, 2287, 2365, 2569, 2626
CciI	TCATGA	3 cut(s)	76, 1177, 2032
CfoI	GCGC	2 cut(s)	49, 927
Cfr13I	GGNCC	2 cut(s)	823, 2008
Csp6I	GTAC	8 cut(s)	97, 965, 1387, 1479, 1677, 1933, 2025, 2674
CviQI	GTAC	8 cut(s)	97, 965, 1387, 1479, 1677, 1933, 2025, 2674
DdeI	CTNAG	4 cut(s)	491, 1259, 1941, 1980
EaeI	YGGCCR	1 cut(s)	461
Eam1104I	CTCTTC	1 cut(s)	612
EarI	CTCTTC	1 cut(s)	612
Eco130I	CCWWGG	3 cut(s)	519, 858, 1210
Eco147I	AGGCCT	1 cut(s)	544
Eco24I	GRGCYC	1 cut(s)	1761
Eco47I	GGWCC	2 cut(s)	823, 2008
Eco57I	CTGAAG	4 cut(s)	468, 929, 1380, 2264
Eco88I	CYCGRG	1 cut(s)	260
EcoNI	CCTNNNNNAGG	2 cut(s)	549, 2700
EcoRII	CCWGG	5 cut(s)	314, 746, 927, 1078, 2562
EcoT14I	CCWWGG	3 cut(s)	519, 858, 1210
EcoT22I	ATGCAT	2 cut(s)	1630, 1978
EcoT38I	GRGCYC	1 cut(s)	1761
ErhI	CCWWGG	3 cut(s)	519, 858, 1210
FaqI	GGGAC	2 cut(s)	1096, 1730
FblI	GTMKAC	3 cut(s)	399, 1065, 2544
FokI	GGATG	4 cut(s)	539, 673, 1961, 2381
FriOI	GRGCYC	1 cut(s)	1761
FspBI	CTAG	9 cut(s)	200, 210, 326, 590, 1164, 1923, 2111, 2162, 2264
FspI	TGCGCA	1 cut(s)	48
GlaI	GCGC	2 cut(s)	48, 926
GsuI	CTGGAG	9 cut(s)	929, 1578, 1812, 1825, 2199, 2309, 2460, 2580, 2753
HaeIII	GGCC	4 cut(s)	54, 463, 544, 576
HapII	CCGG	2 cut(s)	1376, 2669
HhaI	GCGC	2 cut(s)	49, 927
Hin6I	GCGC	2 cut(s)	47, 925
HinP1I	GCGC	2 cut(s)	47, 925
HincII	GTYRAC	1 cut(s)	1422
HindII	GTYRAC	1 cut(s)	1422
HindIII	AAGCTT	2 cut(s)	13, 2505
HpaII	CCGG	2 cut(s)	1376, 2669
HphI	GGTGA	2 cut(s)	1911, 2428
Hpy166II	GTNNAC	9 cut(s)	99, 179, 400, 434, 840, 1066, 1109, 1422, 2545
Hpy8I	GTNNAC	9 cut(s)	99, 179, 400, 434, 840, 1066, 1109, 1422, 2545
HpyAV	CCTTC	9 cut(s)	259, 507, 587, 1158, 1327, 1510, 2100, 2129, 2546
HpyCH4IV	ACGT	3 cut(s)	396, 805, 1385
HpyF3I	CTNAG	4 cut(s)	491, 1259, 1941, 1980
HpySE526I	ACGT	3 cut(s)	396, 805, 1385
HspAI	GCGC	2 cut(s)	47, 925
Kpn2I	TCCGGA	1 cut(s)	2668
LmnI	GCTCC	7 cut(s)	335, 1443, 1699, 1831, 1989, 2293, 2566
LweI	GCATC	7 cut(s)	113, 161, 662, 1471, 1939, 1985, 2359
MaeI	CTAG	9 cut(s)	200, 210, 326, 590, 1164, 1923, 2111, 2162, 2264
MaeII	ACGT	3 cut(s)	396, 805, 1385
MaeIII	GTNAC	3 cut(s)	133, 1360, 2479
MfeI	CAATTG	1 cut(s)	1527
MflI	RGATCY	4 cut(s)	373, 762, 2665, 2738
MhlI	GDGCHC	4 cut(s)	1696, 1761, 2415, 2619
MlsI	TGGCCA	1 cut(s)	463
MluNI	TGGCCA	1 cut(s)	463
MlyI	GAGTC	3 cut(s)	488, 1585, 2582
MmeI	TCCRAC	1 cut(s)	2610
Mox20I	TGGCCA	1 cut(s)	463
Mph1103I	ATGCAT	2 cut(s)	1630, 1978
MroI	TCCGGA	1 cut(s)	2668
MscI	TGGCCA	1 cut(s)	463
MseI	TTAA	9 cut(s)	57, 216, 810, 917, 975, 1010, 1833, 2405, 2579
MslI	CAYNNNNRTG	3 cut(s)	218, 780, 1766
Msp20I	TGGCCA	1 cut(s)	463
MspA1I	CMGCKG	1 cut(s)	671
MspI	CCGG	2 cut(s)	1376, 2669
MspR9I	CCNGG	6 cut(s)	316, 748, 929, 1080, 1377, 2564
MunI	CAATTG	1 cut(s)	1527
Mva1269I	GAATGC	2 cut(s)	307, 1194
MvaI	CCWGG	5 cut(s)	316, 748, 929, 1080, 2564
NciI	CCSGG	1 cut(s)	1377
NcoI	CCATGG	1 cut(s)	1210
NheI	GCTAGC	1 cut(s)	209
NlaIV	GGNNCC	3 cut(s)	2117, 2175, 2388
NmeAIII	GCCGAG	1 cut(s)	1980
NsbI	TGCGCA	1 cut(s)	48
NsiI	ATGCAT	2 cut(s)	1630, 1978
NspI	RCATGY	5 cut(s)	223, 254, 1420, 1618, 1628
PaeI	GCATGC	1 cut(s)	254
PaeR7I	CTCGAG	1 cut(s)	260
PagI	TCATGA	3 cut(s)	76, 1177, 2032
PceI	AGGCCT	1 cut(s)	544
PciI	ACATGT	3 cut(s)	219, 1416, 1614
PctI	GAATGC	2 cut(s)	307, 1194
PfeI	GAWTC	9 cut(s)	731, 751, 1118, 1195, 1253, 1604, 1660, 1916, 2450
PflMI	CCANNNNNTGG	2 cut(s)	2152, 2365
PleI	GAGTC	3 cut(s)	487, 1585, 2582
PpsI	GAGTC	3 cut(s)	487, 1585, 2582
Ppu21I	YACGTR	1 cut(s)	397
PscI	ACATGT	3 cut(s)	219, 1416, 1614
PshBI	ATTAAT	1 cut(s)	810
Psp6I	CCWGG	5 cut(s)	314, 746, 927, 1078, 2562
PspGI	CCWGG	5 cut(s)	314, 746, 927, 1078, 2562
PspN4I	GGNNCC	3 cut(s)	2117, 2175, 2388
PspPI	GGNCC	2 cut(s)	823, 2008
PstNI	CAGNNNCTG	5 cut(s)	2152, 2287, 2365, 2569, 2626
PsuI	RGATCY	4 cut(s)	373, 762, 2665, 2738
PvuII	CAGCTG	1 cut(s)	671
RsaI	GTAC	8 cut(s)	98, 966, 1388, 1480, 1678, 1934, 2026, 2675
RsaNI	GTAC	8 cut(s)	97, 965, 1387, 1479, 1677, 1933, 2025, 2674
RseI	CAYNNNNRTG	3 cut(s)	218, 780, 1766
SaqAI	TTAA	9 cut(s)	57, 216, 810, 917, 975, 1010, 1833, 2405, 2579
Sau96I	GGNCC	2 cut(s)	823, 2008
SchI	GAGTC	3 cut(s)	488, 1585, 2582
ScrFI	CCNGG	6 cut(s)	316, 748, 929, 1080, 1377, 2564
SduI	GDGCHC	4 cut(s)	1696, 1761, 2415, 2619
SfaNI	GCATC	7 cut(s)	113, 161, 662, 1471, 1939, 1985, 2359
SfcI	CTRYAG	5 cut(s)	607, 717, 1158, 1183, 1556
Sfr274I	CTCGAG	1 cut(s)	260
SinI	GGWCC	2 cut(s)	823, 2008
SlaI	CTCGAG	1 cut(s)	260
SmiMI	CAYNNNNRTG	3 cut(s)	218, 780, 1766
SmlI	CTYRAG	4 cut(s)	260, 1204, 1550, 2066
SmoI	CTYRAG	4 cut(s)	260, 1204, 1550, 2066
SpeI	ACTAGT	1 cut(s)	199
SphI	GCATGC	1 cut(s)	254
SseBI	AGGCCT	1 cut(s)	544
SspI	AATATT	2 cut(s)	1341, 1820
SspMI	CTAG	9 cut(s)	200, 210, 326, 590, 1164, 1923, 2111, 2162, 2264
StuI	AGGCCT	1 cut(s)	544
StyD4I	CCNGG	6 cut(s)	314, 746, 927, 1078, 1375, 2562
StyI	CCWWGG	3 cut(s)	519, 858, 1210
TaiI	ACGT	3 cut(s)	399, 808, 1388
TaqI	TCGA	6 cut(s)	72, 144, 261, 1151, 1589, 2448
TatI	WGTACW	5 cut(s)	96, 1478, 1676, 1932, 2673
TfiI	GAWTC	9 cut(s)	731, 751, 1118, 1195, 1253, 1604, 1660, 1916, 2450
Tru1I	TTAA	9 cut(s)	57, 216, 810, 917, 975, 1010, 1833, 2405, 2579
Tru9I	TTAA	9 cut(s)	57, 216, 810, 917, 975, 1010, 1833, 2405, 2579
TscAI	CASTG	9 cut(s)	114, 261, 492, 577, 1801, 2230, 2356, 2560, 2631
TspGWI	ACGGA	1 cut(s)	1245
TspRI	CASTG	9 cut(s)	114, 261, 492, 577, 1801, 2230, 2356, 2560, 2631
Van91I	CCANNNNNTGG	2 cut(s)	2152, 2365
VpaK11BI	GGWCC	2 cut(s)	823, 2008
VspI	ATTAAT	1 cut(s)	810
XagI	CCTNNNNNAGG	2 cut(s)	549, 2700
XapI	RAATTY	6 cut(s)	41, 913, 1132, 1710, 1771, 2342
XbaI	TCTAGA	1 cut(s)	589
XceI	RCATGY	5 cut(s)	223, 254, 1420, 1618, 1628
XhoI	CTCGAG	1 cut(s)	260
XmiI	GTMKAC	3 cut(s)	399, 1065, 2544
XspI	CTAG	9 cut(s)	200, 210, 326, 590, 1164, 1923, 2111, 2162, 2264
Zsp2I	ATGCAT	2 cut(s)	1630, 1978

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.