Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000471.1

Orthogroup ID

OG0021133

Physical Location & Seq

Genomic Coordinates Forward (+)

32075 .. 36654

Gene Structure 4580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

atgctgaatccgatagatatatcgccgcccgaaacgccttgccctttaacaccaaagcttaacggcgagcctcgatcttccaccaccaccaccacagctcaatccaccgtccacgtgtcctcagaacccaccctcgccaacctccaattggtgccgaaggatcctctcgccggcgccgtgaaatcccgagatctcaaaaggtcgcgcaatctagcctctcaatttctctgttatactaattttgattctatggctgcaatagaaactgtgctcaggtcaagaatgcctggacacgaagttgccaacgatgacatgatgatcgatgagtatgaacagaagcaagtgaatgctgttcctgatggatttaactctcagtatctcaaaatttactatggaaagctcttcccatatgaggtaatgtttaagtggatgtcctatgcaaatgatggcaagcatcctgcatgcaaccagtcctactttggccggagagagttttctttcacactggataatgatgtttatctgcggtacaaaactttcaactccgtgtctgagcttgaaaattctatcaaagagaagtgccccgtcaaaatagatattgggcctgtgtacaatgttgatcctgcaaagaggcattcctatgctcaaagtggttgctaccccgaggagagggaactgatttttgatatagatatgtcagattacgatgatgttagatactgctgctcaggagctgatgtgtgcctggagtgctggccgcttatgacaattgctatcaaagtgattgacactgcccttcgagaacccaccatcgaatatgcaagaagaaaaatgggggagagccacaacaacctccaccaccgcgcaatgacgtcgtcctctgctgcttctcgattgggtttggggataaggactgcttcttcatccaccaccagtgaaatcgtggaggctcgaggccacattctaagggccactggccggaaggaccgcctcagcaaggtctgcaccgccaaaggccccagggaccatcgcgccgtcgattggctcatcaagaaagccaaggccgcaatcgacgagctcgacgagctgccgccgtggaacccgaactcaatttctgttcagacaacatcttctccgacagtgccgatatccgccgcgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000428 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0003896 GO:0003899 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005658 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006269 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0030880 GO:0030894 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0032993 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0043601 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0055029 GO:0061695 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:0097747 GO:0140098 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 map00230 map00240 map01100 map03030

Pfam Domains

Protein Families

DNA_primase_S

Protein Analysis

386

Amino Acids

43.22

Weight (kDa)

6.52

Isoelectric Point (pI)

54.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_primase_S	PF01896	228 - 268	6.8e-09	DNA primase small subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0021133)

Species	Orthologous Gene IDs
malus_domestica	MD14G1127500.v1.1
rosa_chinensis	RchiOBHm_Chr6g0245381
rosa_multiflora	Rmu_sc0000471.1_g000004 Rmu_sc0002202.1_g000012
rosa_samantha	Rh6BG026200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	875
AccB1I	GGYRCC	2 cut(s)	151, 173
AccII	CGCG	4 cut(s)	205, 864, 1032, 1157
AclWI	GGATC	3 cut(s)	155, 168, 614
AcoI	YGGCCR	3 cut(s)	481, 755, 976
AcsI	RAATTY	2 cut(s)	384, 562
AcvI	CACGTG	1 cut(s)	115
AcyI	GRCGYC	2 cut(s)	174, 872
AfaI	GTAC	2 cut(s)	530, 611
AfiI	CCNNNNNNNGG	7 cut(s)	148, 170, 412, 669, 978, 997, 1041
AflIII	ACRYGT	1 cut(s)	114
AgsI	TTSAA	2 cut(s)	541, 560
AjnI	CCWGG	3 cut(s)	286, 744, 1019
AluBI	AGCT	7 cut(s)	58, 98, 400, 556, 734, 1078, 1087
AluI	AGCT	7 cut(s)	58, 98, 400, 556, 734, 1078, 1087
Alw21I	GWGCWC	2 cut(s)	273, 1080
AlwI	GGATC	3 cut(s)	155, 168, 614
AlwNI	CAGNNNCTG	1 cut(s)	734
Ama87I	CYCGRG	3 cut(s)	186, 662, 951
AoxI	GGCC	8 cut(s)	481, 602, 755, 955, 969, 976, 1015, 1062
ApeKI	GCWGC	4 cut(s)	254, 723, 884, 1087
ApoI	RAATTY	2 cut(s)	384, 562
AspLEI	GCGC	4 cut(s)	176, 207, 866, 1034
AspS9I	GGNCC	5 cut(s)	602, 969, 985, 1016, 1024
AvaI	CYCGRG	3 cut(s)	186, 662, 951
AvaII	GGWCC	2 cut(s)	985, 1024
BaeGI	GKGCMC	1 cut(s)	584
BamHI	GGATCC	1 cut(s)	160
BanI	GGYRCC	2 cut(s)	151, 173
BanII	GRGCYC	1 cut(s)	1080
BbrPI	CACGTG	1 cut(s)	115
Bbv12I	GWGCWC	2 cut(s)	273, 1080
BbvCI	CCTCAGC	1 cut(s)	992
BbvI	GCAGC	4 cut(s)	241, 710, 871, 1074
BccI	CCATC	4 cut(s)	353, 440, 818, 1035
BceAI	ACGGC	4 cut(s)	79, 161, 1019, 1078
BcgI	CGANNNNNNTGC	2 cut(s)	855, 889
BciT130I	CCWGG	3 cut(s)	288, 746, 1021
BfaI	CTAG	1 cut(s)	212
BfoI	RGCGCY	1 cut(s)	177
BglII	AGATCT	1 cut(s)	190
BisI	GCNGC	9 cut(s)	26, 255, 724, 758, 885, 1065, 1088, 1091, 1155
BlsI	GCNGC	9 cut(s)	27, 256, 725, 759, 886, 1066, 1089, 1092, 1156
Bme1390I	CCNGG	3 cut(s)	288, 746, 1021
Bme18I	GGWCC	2 cut(s)	985, 1024
BmeT110I	CYCGRG	3 cut(s)	186, 662, 951
BmgT120I	GGNCC	5 cut(s)	602, 969, 985, 1016, 1024
BmiI	GGNNCC	6 cut(s)	153, 162, 175, 1018, 1025, 1100
BmrFI	CCNGG	3 cut(s)	288, 746, 1021
BmsI	GCATC	1 cut(s)	463
BpmI	CTGGAG	1 cut(s)	767
Bpu10I	CCTNAGC	3 cut(s)	272, 727, 992
Bsa29I	ATCGAT	1 cut(s)	321
BsaAI	YACGTR	1 cut(s)	115
BsaBI	GATNNNNATC	1 cut(s)	519
BsaHI	GRCGYC	2 cut(s)	174, 872
BsaJI	CCNNGG	5 cut(s)	663, 1019, 1020, 1059, 1094
BsaXI	ACNNNNNCTCC	4 cut(s)	723, 753, 1117, 1147
Bsc4I	CCNNNNNNNGG	7 cut(s)	148, 170, 412, 669, 978, 997, 1041
Bse118I	RCCGGY	1 cut(s)	170
Bse1I	ACTGG	4 cut(s)	469, 510, 933, 979
Bse3DI	GCAATG	1 cut(s)	873
Bse8I	GATNNNNATC	1 cut(s)	519
BseBI	CCWGG	3 cut(s)	288, 746, 1021
BseCI	ATCGAT	1 cut(s)	321
BseDI	CCNNGG	5 cut(s)	663, 1019, 1020, 1059, 1094
BseGI	GGATG	3 cut(s)	435, 454, 923
BseJI	GATNNNNATC	1 cut(s)	519
BseLI	CCNNNNNNNGG	7 cut(s)	148, 170, 412, 669, 978, 997, 1041
BseMI	GCAATG	1 cut(s)	873
BseMII	CTCAG	6 cut(s)	135, 286, 386, 543, 741, 1006
BseNI	ACTGG	4 cut(s)	469, 510, 933, 979
BseRI	GAGGAG	1 cut(s)	680
BseSI	GKGCMC	1 cut(s)	584
BseXI	GCAGC	4 cut(s)	241, 710, 871, 1074
BsgI	GTGCAG	1 cut(s)	988
Bsh1236I	CGCG	4 cut(s)	205, 864, 1032, 1157
BshFI	GGCC	8 cut(s)	483, 604, 757, 957, 971, 978, 1017, 1064
BshNI	GGYRCC	2 cut(s)	151, 173
BshVI	ATCGAT	1 cut(s)	321
BsiHKAI	GWGCWC	2 cut(s)	273, 1080
BsiHKCI	CYCGRG	3 cut(s)	186, 662, 951
BsiSI	CCGG	3 cut(s)	171, 484, 979
BslFI	GGGAC	1 cut(s)	1037
BslI	CCNNNNNNNGG	7 cut(s)	148, 170, 412, 669, 978, 997, 1041
BsmFI	GGGAC	1 cut(s)	1037
BsmI	GAATGC	3 cut(s)	288, 352, 634
BsnI	GGCC	8 cut(s)	483, 604, 757, 957, 971, 978, 1017, 1064
BsoBI	CYCGRG	3 cut(s)	186, 662, 951
Bsp1286I	GDGCHC	3 cut(s)	273, 584, 1080
Bsp1407I	TGTACA	1 cut(s)	609
Bsp143I	GATC	5 cut(s)	74, 160, 190, 318, 619
BspANI	GGCC	8 cut(s)	483, 604, 757, 957, 971, 978, 1017, 1064
BspCNI	CTCAG	6 cut(s)	134, 285, 385, 544, 740, 1005
BspDI	ATCGAT	1 cut(s)	321
BspFNI	CGCG	4 cut(s)	205, 864, 1032, 1157
BspLI	GGNNCC	6 cut(s)	153, 162, 175, 1018, 1025, 1100
BspPI	GGATC	3 cut(s)	155, 168, 614
BspQI	GCTCTTC	1 cut(s)	407
BspT107I	GGYRCC	2 cut(s)	151, 173
BsrDI	GCAATG	1 cut(s)	873
BsrFI	RCCGGY	1 cut(s)	170
BsrGI	TGTACA	1 cut(s)	609
BsrI	ACTGG	4 cut(s)	469, 510, 933, 979
BssAI	RCCGGY	1 cut(s)	170
BssECI	CCNNGG	5 cut(s)	663, 1019, 1020, 1059, 1094
BssMI	GATC	5 cut(s)	74, 160, 190, 318, 619
BssNI	GRCGYC	2 cut(s)	174, 872
BssT1I	CCWWGG	1 cut(s)	1059
Bst2UI	CCWGG	3 cut(s)	288, 746, 1021
Bst4CI	ACNGT	3 cut(s)	109, 268, 1141
Bst6I	CTCTTC	1 cut(s)	407
BstACI	GRCGYC	2 cut(s)	174, 872
BstAPI	GCANNNNNTGC	1 cut(s)	1002
BstAUI	TGTACA	1 cut(s)	609
BstBAI	YACGTR	1 cut(s)	115
BstC8I	GCNNGC	5 cut(s)	68, 172, 452, 463, 755
BstDEI	CTNAG	7 cut(s)	121, 272, 372, 552, 727, 965, 992
BstDSI	CCRYGG	1 cut(s)	1094
BstENI	CCTNNNNNAGG	1 cut(s)	995
BstF5I	GGATG	3 cut(s)	435, 454, 923
BstFNI	CGCG	4 cut(s)	205, 864, 1032, 1157
BstH2I	RGCGCY	1 cut(s)	177
BstHHI	GCGC	4 cut(s)	176, 207, 866, 1034
BstKTI	GATC	5 cut(s)	77, 163, 193, 321, 622
BstMBI	GATC	5 cut(s)	74, 160, 190, 318, 619
BstMWI	GCNNNNNNNGC	5 cut(s)	34, 750, 1002, 1064, 1084
BstNI	CCWGG	3 cut(s)	288, 746, 1021
BstNSI	RCATGY	1 cut(s)	465
BstSCI	CCNGG	3 cut(s)	286, 744, 1019
BstSLI	GKGCMC	1 cut(s)	584
BstUI	CGCG	4 cut(s)	205, 864, 1032, 1157
BstV1I	GCAGC	4 cut(s)	241, 710, 871, 1074
BstX2I	RGATCY	2 cut(s)	160, 190
BstYI	RGATCY	2 cut(s)	160, 190
Bsu15I	ATCGAT	1 cut(s)	321
BsuRI	GGCC	8 cut(s)	483, 604, 757, 957, 971, 978, 1017, 1064
BsuTUI	ATCGAT	1 cut(s)	321
BtgI	CCRYGG	1 cut(s)	1094
BtgZI	GCGATG	1 cut(s)	1013
BtsCI	GGATG	3 cut(s)	435, 454, 923
BtsI	GCAGTG	1 cut(s)	789
BtsIMutI	CAGTG	5 cut(s)	503, 789, 940, 972, 1146
Cac8I	GCNNGC	5 cut(s)	68, 172, 452, 463, 755
CaiI	CAGNNNCTG	1 cut(s)	734
CfoI	GCGC	4 cut(s)	176, 207, 866, 1034
Cfr10I	RCCGGY	1 cut(s)	170
Cfr13I	GGNCC	5 cut(s)	602, 969, 985, 1016, 1024
ClaI	ATCGAT	1 cut(s)	321
Csp6I	GTAC	2 cut(s)	529, 610
CviAII	CATG	2 cut(s)	313, 462
CviQI	GTAC	2 cut(s)	529, 610
DdeI	CTNAG	7 cut(s)	121, 272, 372, 552, 727, 965, 992
DinI	GGCGCC	1 cut(s)	175
DpnI	GATC	5 cut(s)	76, 162, 192, 320, 621
DpnII	GATC	5 cut(s)	74, 160, 190, 318, 619
EaeI	YGGCCR	3 cut(s)	481, 755, 976
Eam1104I	CTCTTC	1 cut(s)	407
EarI	CTCTTC	1 cut(s)	407
EciI	GGCGGA	1 cut(s)	1141
Ecl136II	GAGCTC	1 cut(s)	1078
Eco130I	CCWWGG	1 cut(s)	1059
Eco24I	GRGCYC	1 cut(s)	1080
Eco32I	GATATC	1 cut(s)	1149
Eco47I	GGWCC	2 cut(s)	985, 1024
Eco53kI	GAGCTC	1 cut(s)	1078
Eco72I	CACGTG	1 cut(s)	115
Eco88I	CYCGRG	3 cut(s)	186, 662, 951
EcoICRI	GAGCTC	1 cut(s)	1078
EcoNI	CCTNNNNNAGG	1 cut(s)	995
EcoO109I	RGGNCCY	1 cut(s)	1016
EcoRII	CCWGG	3 cut(s)	286, 744, 1019
EcoRV	GATATC	1 cut(s)	1149
EcoT14I	CCWWGG	1 cut(s)	1059
EcoT38I	GRGCYC	1 cut(s)	1080
EgeI	GGCGCC	1 cut(s)	175
EheI	GGCGCC	1 cut(s)	175
ErhI	CCWWGG	1 cut(s)	1059
FaeI	CATG	2 cut(s)	316, 465
FalI	AAGNNNNNCTT	2 cut(s)	901, 933
FaqI	GGGAC	1 cut(s)	1037
FatI	CATG	2 cut(s)	312, 461
FauNDI	CATATG	1 cut(s)	409
Fnu4HI	GCNGC	9 cut(s)	26, 255, 724, 758, 885, 1065, 1088, 1091, 1155
FokI	GGATG	3 cut(s)	441, 442, 910
FriOI	GRGCYC	1 cut(s)	1080
Fsp4HI	GCNGC	9 cut(s)	26, 255, 724, 758, 885, 1065, 1088, 1091, 1155
FspBI	CTAG	1 cut(s)	212
GlaI	GCGC	4 cut(s)	175, 206, 865, 1033
GluI	GCNGC	9 cut(s)	26, 255, 724, 758, 885, 1065, 1088, 1091, 1155
GsuI	CTGGAG	1 cut(s)	767
HaeII	RGCGCY	1 cut(s)	177
HaeIII	GGCC	8 cut(s)	483, 604, 757, 957, 971, 978, 1017, 1064
HapII	CCGG	3 cut(s)	171, 484, 979
HhaI	GCGC	4 cut(s)	176, 207, 866, 1034
Hin1I	GRCGYC	2 cut(s)	174, 872
Hin1II	CATG	2 cut(s)	316, 465
Hin6I	GCGC	4 cut(s)	174, 205, 864, 1032
HinP1I	GCGC	4 cut(s)	174, 205, 864, 1032
HindIII	AAGCTT	1 cut(s)	56
HinfI	GANTC	2 cut(s)	7, 245
HpaII	CCGG	3 cut(s)	171, 484, 979
Hpy166II	GTNNAC	2 cut(s)	112, 610
Hpy188I	TCNGA	6 cut(s)	12, 124, 553, 700, 1122, 1137
Hpy188III	TCNNGA	7 cut(s)	186, 279, 356, 729, 800, 891, 1051
Hpy8I	GTNNAC	2 cut(s)	112, 610
Hpy99I	CGWCG	4 cut(s)	877, 1040, 1076, 1085
HpyAV	CCTTC	3 cut(s)	151, 806, 976
HpyCH4III	ACNGT	3 cut(s)	109, 268, 1141
HpyCH4IV	ACGT	2 cut(s)	114, 872
HpyCH4V	TGCA	7 cut(s)	257, 440, 461, 465, 626, 821, 1005
HpyF10VI	GCNNNNNNNGC	5 cut(s)	34, 750, 1002, 1064, 1084
HpyF3I	CTNAG	7 cut(s)	121, 272, 372, 552, 727, 965, 992
HpySE526I	ACGT	2 cut(s)	114, 872
Hsp92I	GRCGYC	2 cut(s)	174, 872
Hsp92II	CATG	2 cut(s)	316, 465
HspAI	GCGC	4 cut(s)	174, 205, 864, 1032
KasI	GGCGCC	1 cut(s)	173
KroI	GCCGGC	1 cut(s)	170
KroNI	GCCGGC	1 cut(s)	172
Kzo9I	GATC	5 cut(s)	74, 160, 190, 318, 619
LguI	GCTCTTC	1 cut(s)	407
LmnI	GCTCC	1 cut(s)	731
Lsp1109I	GCAGC	4 cut(s)	241, 710, 871, 1074
LweI	GCATC	1 cut(s)	463
MaeI	CTAG	1 cut(s)	212
MaeII	ACGT	2 cut(s)	114, 872
MalI	GATC	5 cut(s)	76, 162, 192, 320, 621
MboI	GATC	5 cut(s)	74, 160, 190, 318, 619
MboII	GAAGA	5 cut(s)	69, 394, 837, 912, 1122
MfeI	CAATTG	2 cut(s)	146, 768
MflI	RGATCY	2 cut(s)	160, 190
MhlI	GDGCHC	3 cut(s)	273, 584, 1080
MluCI	AATT	7 cut(s)	146, 221, 238, 384, 562, 768, 1110
Mly113I	GGCGCC	1 cut(s)	174
MmeI	TCCRAC	1 cut(s)	1160
MreI	CGCCGGCG	1 cut(s)	170
MroNI	GCCGGC	1 cut(s)	170
MseI	TTAA	4 cut(s)	47, 60, 366, 423
MslI	CAYNNNNRTG	1 cut(s)	639
MspI	CCGG	3 cut(s)	171, 484, 979
MspR9I	CCNGG	3 cut(s)	288, 746, 1021
MunI	CAATTG	2 cut(s)	146, 768
Mva1269I	GAATGC	3 cut(s)	288, 352, 634
MvaI	CCWGG	3 cut(s)	288, 746, 1021
MvnI	CGCG	4 cut(s)	205, 864, 1032, 1157
MwoI	GCNNNNNNNGC	5 cut(s)	34, 750, 1002, 1064, 1084
NaeI	GCCGGC	1 cut(s)	172
NarI	GGCGCC	1 cut(s)	174
NdeI	CATATG	1 cut(s)	409
NdeII	GATC	5 cut(s)	74, 160, 190, 318, 619
NgoMIV	GCCGGC	1 cut(s)	170
NlaIII	CATG	2 cut(s)	316, 465
NlaIV	GGNNCC	6 cut(s)	153, 162, 175, 1018, 1025, 1100
NspI	RCATGY	1 cut(s)	465
PaeI	GCATGC	1 cut(s)	465
PaeR7I	CTCGAG	1 cut(s)	951
PasI	CCCWGGG	1 cut(s)	1020
PciSI	GCTCTTC	1 cut(s)	407
PcsI	WCGNNNNNNNCGW	3 cut(s)	174, 1077, 1080
PctI	GAATGC	3 cut(s)	288, 352, 634
PdiI	GCCGGC	1 cut(s)	172
PfeI	GAWTC	2 cut(s)	7, 245
PflFI	GACNNNGTC	1 cut(s)	874
PkrI	GCNGC	9 cut(s)	27, 256, 725, 759, 886, 1066, 1089, 1092, 1156
PluTI	GGCGCC	1 cut(s)	177
PmaCI	CACGTG	1 cut(s)	115
PmlI	CACGTG	1 cut(s)	115
Ppu21I	YACGTR	1 cut(s)	115
Psp124BI	GAGCTC	1 cut(s)	1080
Psp6I	CCWGG	3 cut(s)	286, 744, 1019
PspCI	CACGTG	1 cut(s)	115
PspGI	CCWGG	3 cut(s)	286, 744, 1019
PspN4I	GGNNCC	6 cut(s)	153, 162, 175, 1018, 1025, 1100
PspPI	GGNCC	5 cut(s)	602, 969, 985, 1016, 1024
PspXI	VCTCGAGB	1 cut(s)	951
PstNI	CAGNNNCTG	1 cut(s)	734
PsuI	RGATCY	2 cut(s)	160, 190
PsyI	GACNNNGTC	1 cut(s)	874
RsaI	GTAC	2 cut(s)	530, 611
RsaNI	GTAC	2 cut(s)	529, 610
RseI	CAYNNNNRTG	1 cut(s)	639
SacI	GAGCTC	1 cut(s)	1080
SapI	GCTCTTC	1 cut(s)	407
SaqAI	TTAA	4 cut(s)	47, 60, 366, 423
SatI	GCNGC	9 cut(s)	26, 255, 724, 758, 885, 1065, 1088, 1091, 1155
Sau3AI	GATC	5 cut(s)	74, 160, 190, 318, 619
Sau96I	GGNCC	5 cut(s)	602, 969, 985, 1016, 1024
ScrFI	CCNGG	3 cut(s)	288, 746, 1021
SduI	GDGCHC	3 cut(s)	273, 584, 1080
SfaNI	GCATC	1 cut(s)	463
SfoI	GGCGCC	1 cut(s)	175
Sfr274I	CTCGAG	1 cut(s)	951
SgrAI	CRCCGGYG	1 cut(s)	170
SinI	GGWCC	2 cut(s)	985, 1024
SlaI	CTCGAG	1 cut(s)	951
SmiMI	CAYNNNNRTG	1 cut(s)	639
SmlI	CTYRAG	1 cut(s)	951
SmoI	CTYRAG	1 cut(s)	951
SphI	GCATGC	1 cut(s)	465
Sse9I	AATT	7 cut(s)	146, 221, 238, 384, 562, 768, 1110
SspDI	GGCGCC	1 cut(s)	173
SspMI	CTAG	1 cut(s)	212
SstI	GAGCTC	1 cut(s)	1080
StyD4I	CCNGG	3 cut(s)	286, 744, 1019
StyI	CCWWGG	1 cut(s)	1059
TaaI	ACNGT	3 cut(s)	109, 268, 1141
TaiI	ACGT	2 cut(s)	117, 875
TaqI	TCGA	9 cut(s)	73, 321, 799, 813, 892, 952, 1038, 1071, 1080
TasI	AATT	7 cut(s)	146, 221, 238, 384, 562, 768, 1110
TatI	WGTACW	1 cut(s)	609
TauI	GCSGC	5 cut(s)	28, 760, 1067, 1093, 1157
TfiI	GAWTC	2 cut(s)	7, 245
Tru1I	TTAA	4 cut(s)	47, 60, 366, 423
Tru9I	TTAA	4 cut(s)	47, 60, 366, 423
TscAI	CASTG	5 cut(s)	510, 796, 940, 979, 1146
TseI	GCWGC	4 cut(s)	254, 723, 884, 1087
TspDTI	ATGAA	2 cut(s)	345, 912
TspGWI	ACGGA	1 cut(s)	535
TspRI	CASTG	5 cut(s)	510, 796, 940, 979, 1146
Tth111I	GACNNNGTC	1 cut(s)	874
VpaK11BI	GGWCC	2 cut(s)	985, 1024
XagI	CCTNNNNNAGG	1 cut(s)	995
XapI	RAATTY	2 cut(s)	384, 562
XceI	RCATGY	1 cut(s)	465
XcmI	CCANNNNNNNNNTGG	3 cut(s)	145, 476, 940
XhoI	CTCGAG	1 cut(s)	951
XspI	CTAG	1 cut(s)	212
ZraI	GACGTC	1 cut(s)	873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.