Rmu_sc0000580.1_g000092

Dual specificity phosphatase, catalytic domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000580.1
N/A
Physical Location & Seq
Reverse (-)
374985 .. 376197
1213 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 642 bp
atgaagctaaagtggttgcggtctggtgatgaggaagacggtgccgatgaatctcaggccgttgagagctctttgcgctctcgatctcgtcagctccggctgagaacagtaatggagaacggaatcgatgaaggagtcgtctcatccgacggtcctgtgctgccagagccgagcaagatggtgaggaaggatgttgctggacgttttaaaacattactcaagtctgtgagggtatatatgttggcggatggccttcttcgccgcataagctacctcccggtaaccctgccattatcgactgcacttgtgagtttcccagaggttgttggtcagagcagagttatatgtgcgtcccaacatgggatacaaggtctcctcacccctctcgatcagattgaatccgctgtcaagtgggcttctagacagagggagcaaaacagggccgttttggtccactgtgcatacggtcatggaagaagtgtggctgttatgtgtgcattattacttgctcttggtttggcagaggattggaaaactactgagggattaattcgggaaagacgtccttacattagagtgaattctctacaccgcaaggctctggaagagtggtcaaaacatcggttatttcctaaggaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DSPc

Protein Analysis

213

Amino Acids

23.95

Weight (kDa)

9.63

Isoelectric Point (pI)

56.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DSPc PF00782 131 - 206 8.2e-09 Dual specificity phosphatase, catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 565
AccB1I GGYRCC 1 cut(s) 41
AciI CCGC 5 cut(s) 19, 245, 262, 402, 592
AcsI RAATTY 1 cut(s) 580
AcyI GRCGYC 1 cut(s) 562
AfiI CCNNNNNNNGG 1 cut(s) 360
AgsI TTSAA 1 cut(s) 398
AluBI AGCT 4 cut(s) 7, 69, 94, 270
AluI AGCT 4 cut(s) 7, 69, 94, 270
Alw21I GWGCWC 1 cut(s) 71
Alw26I GTCTC 2 cut(s) 145, 377
AoxI GGCC 3 cut(s) 57, 250, 441
ApeKI GCWGC 1 cut(s) 160
ApoI RAATTY 1 cut(s) 580
AseI ATTAAT 1 cut(s) 548
AspLEI GCGC 1 cut(s) 78
AspS9I GGNCC 3 cut(s) 152, 441, 451
AsuC2I CCSGG 1 cut(s) 278
AsuHPI GGTGA 3 cut(s) 38, 193, 370
AvaII GGWCC 2 cut(s) 152, 451
AxyI CCTNAGG 1 cut(s) 633
BanI GGYRCC 1 cut(s) 41
BanII GRGCYC 1 cut(s) 71
BbsI GAAGAC 1 cut(s) 42
Bbv12I GWGCWC 1 cut(s) 71
BbvI GCAGC 1 cut(s) 147
BccI CCATC 2 cut(s) 172, 242
BceAI ACGGC 2 cut(s) 44, 428
BciVI GTATCC 1 cut(s) 357
BcnI CCSGG 1 cut(s) 278
BcoDI GTCTC 2 cut(s) 145, 377
BfaI CTAG 1 cut(s) 420
BfuI GTATCC 1 cut(s) 357
BisI GCNGC 2 cut(s) 161, 262
BlsI GCNGC 2 cut(s) 162, 263
Bme1390I CCNGG 1 cut(s) 278
Bme18I GGWCC 2 cut(s) 152, 451
BmgT120I GGNCC 3 cut(s) 152, 441, 451
BmiI GGNNCC 1 cut(s) 43
BmrFI CCNGG 1 cut(s) 278
BpiI GAAGAC 1 cut(s) 42
BpuEI CTTGAG 1 cut(s) 203
BpuMI CCSGG 1 cut(s) 278
Bsa29I ATCGAT 1 cut(s) 126
BsaHI GRCGYC 1 cut(s) 562
BsaI GGTCTC 1 cut(s) 377
BsaXI ACNNNNNCTCC 2 cut(s) 357, 387
Bsc4I CCNNNNNNNGG 1 cut(s) 360
Bse21I CCTNAGG 1 cut(s) 633
BseCI ATCGAT 1 cut(s) 126
BseGI GGATG 3 cut(s) 143, 196, 253
BseLI CCNNNNNNNGG 1 cut(s) 360
BseMII CTCAG 3 cut(s) 68, 92, 531
BseRI GAGGAG 1 cut(s) 365
BseXI GCAGC 1 cut(s) 147
BsgI GTGCAG 1 cut(s) 285
BshFI GGCC 3 cut(s) 59, 252, 443
BshNI GGYRCC 1 cut(s) 41
BshVI ATCGAT 1 cut(s) 126
BsiHKAI GWGCWC 1 cut(s) 71
BsiSI CCGG 2 cut(s) 97, 278
BslFI GGGAC 1 cut(s) 337
BslI CCNNNNNNNGG 1 cut(s) 360
BsmAI GTCTC 2 cut(s) 145, 377
BsmBI CGTCTC 1 cut(s) 145
BsmFI GGGAC 1 cut(s) 337
BsnI GGCC 3 cut(s) 59, 252, 443
Bso31I GGTCTC 1 cut(s) 377
Bsp1286I GDGCHC 1 cut(s) 71
Bsp143I GATC 2 cut(s) 83, 388
BspACI CCGC 5 cut(s) 19, 245, 262, 402, 592
BspANI GGCC 3 cut(s) 59, 252, 443
BspCNI CTCAG 3 cut(s) 67, 93, 532
BspDI ATCGAT 1 cut(s) 126
BspLI GGNNCC 1 cut(s) 43
BspT107I GGYRCC 1 cut(s) 41
BspTNI GGTCTC 1 cut(s) 377
BssMI GATC 2 cut(s) 83, 388
BssNI GRCGYC 1 cut(s) 562
Bst4CI ACNGT 5 cut(s) 41, 109, 152, 458, 467
Bst6I CTCTTC 1 cut(s) 600
BstACI GRCGYC 1 cut(s) 562
BstDEI CTNAG 4 cut(s) 54, 101, 540, 633
BstEII GGTNACC 1 cut(s) 280
BstF5I GGATG 3 cut(s) 143, 196, 253
BstHHI GCGC 1 cut(s) 78
BstKTI GATC 2 cut(s) 86, 391
BstMAI GTCTC 2 cut(s) 145, 377
BstMBI GATC 2 cut(s) 83, 388
BstMWI GCNNNNNNNGC 4 cut(s) 75, 166, 258, 267
BstPI GGTNACC 1 cut(s) 280
BstSCI CCNGG 1 cut(s) 276
BstV1I GCAGC 1 cut(s) 147
BstV2I GAAGAC 1 cut(s) 42
Bsu15I ATCGAT 1 cut(s) 126
Bsu36I CCTNAGG 1 cut(s) 633
BsuI GTATCC 1 cut(s) 357
BsuRI GGCC 3 cut(s) 59, 252, 443
BsuTUI ATCGAT 1 cut(s) 126
BtsCI GGATG 3 cut(s) 143, 196, 253
BtsIMutI CAGTG 1 cut(s) 454
CfoI GCGC 1 cut(s) 78
Cfr13I GGNCC 3 cut(s) 152, 441, 451
ClaI ATCGAT 1 cut(s) 126
CseI GACGC 1 cut(s) 339
CviAII CATG 2 cut(s) 359, 470
DdeI CTNAG 4 cut(s) 54, 101, 540, 633
DpnI GATC 2 cut(s) 85, 390
DpnII GATC 2 cut(s) 83, 388
DraI TTTAAA 1 cut(s) 208
Eam1104I CTCTTC 1 cut(s) 600
EarI CTCTTC 1 cut(s) 600
EciI GGCGGA 1 cut(s) 260
Ecl136II GAGCTC 1 cut(s) 69
Eco24I GRGCYC 1 cut(s) 71
Eco31I GGTCTC 1 cut(s) 377
Eco47I GGWCC 2 cut(s) 152, 451
Eco53kI GAGCTC 1 cut(s) 69
Eco81I CCTNAGG 1 cut(s) 633
Eco91I GGTNACC 1 cut(s) 280
EcoICRI GAGCTC 1 cut(s) 69
EcoO65I GGTNACC 1 cut(s) 280
EcoRI GAATTC 1 cut(s) 580
EcoT38I GRGCYC 1 cut(s) 71
Esp3I CGTCTC 1 cut(s) 145
FaeI CATG 2 cut(s) 362, 473
FalI AAGNNNNNCTT 2 cut(s) 550, 582
FaqI GGGAC 1 cut(s) 337
FatI CATG 2 cut(s) 358, 469
Fnu4HI GCNGC 2 cut(s) 161, 262
FokI GGATG 3 cut(s) 130, 203, 260
FriOI GRGCYC 1 cut(s) 71
Fsp4HI GCNGC 2 cut(s) 161, 262
FspBI CTAG 1 cut(s) 420
GlaI GCGC 1 cut(s) 77
GluI GCNGC 2 cut(s) 161, 262
HaeIII GGCC 3 cut(s) 59, 252, 443
HapII CCGG 2 cut(s) 97, 278
HgaI GACGC 1 cut(s) 339
HhaI GCGC 1 cut(s) 78
Hin1I GRCGYC 1 cut(s) 562
Hin1II CATG 2 cut(s) 362, 473
Hin6I GCGC 1 cut(s) 76
HinP1I GCGC 1 cut(s) 76
HinfI GANTC 4 cut(s) 50, 123, 135, 398
HpaII CCGG 2 cut(s) 97, 278
HphI GGTGA 3 cut(s) 38, 193, 370
Hpy166II GTNNAC 1 cut(s) 454
Hpy188I TCNGA 3 cut(s) 148, 333, 393
Hpy188III TCNNGA 5 cut(s) 81, 386, 420, 554, 602
Hpy8I GTNNAC 1 cut(s) 454
Hpy99I CGWCG 1 cut(s) 152
HpyAV CCTTC 3 cut(s) 125, 181, 263
HpyCH4III ACNGT 5 cut(s) 41, 109, 152, 458, 467
HpyCH4IV ACGT 2 cut(s) 202, 562
HpyCH4V TGCA 3 cut(s) 302, 461, 497
HpyF10VI GCNNNNNNNGC 4 cut(s) 75, 166, 258, 267
HpyF3I CTNAG 4 cut(s) 54, 101, 540, 633
HpySE526I ACGT 2 cut(s) 202, 562
Hsp92I GRCGYC 1 cut(s) 562
Hsp92II CATG 2 cut(s) 362, 473
HspAI GCGC 1 cut(s) 76
Kzo9I GATC 2 cut(s) 83, 388
LmnI GCTCC 2 cut(s) 99, 430
Lsp1109I GCAGC 1 cut(s) 147
MaeI CTAG 1 cut(s) 420
MaeII ACGT 2 cut(s) 202, 562
MaeIII GTNAC 1 cut(s) 280
MalI GATC 2 cut(s) 85, 390
MboI GATC 2 cut(s) 83, 388
MboII GAAGA 4 cut(s) 47, 248, 486, 617
MhlI GDGCHC 1 cut(s) 71
MluCI AATT 2 cut(s) 549, 580
MlyI GAGTC 1 cut(s) 144
MmeI TCCRAC 1 cut(s) 171
MseI TTAA 2 cut(s) 207, 548
MslI CAYNNNNRTG 1 cut(s) 575
MspA1I CMGCKG 1 cut(s) 404
MspI CCGG 2 cut(s) 97, 278
MspR9I CCNGG 1 cut(s) 278
MwoI GCNNNNNNNGC 4 cut(s) 75, 166, 258, 267
NciI CCSGG 1 cut(s) 278
NdeII GATC 2 cut(s) 83, 388
NlaIII CATG 2 cut(s) 362, 473
NlaIV GGNNCC 1 cut(s) 43
NmeAIII GCCGAG 1 cut(s) 195
PcsI WCGNNNNNNNCGW 2 cut(s) 144, 559
PfeI GAWTC 3 cut(s) 50, 123, 398
PkrI GCNGC 2 cut(s) 162, 263
PleI GAGTC 1 cut(s) 143
PpsI GAGTC 1 cut(s) 143
PshBI ATTAAT 1 cut(s) 548
Psp124BI GAGCTC 1 cut(s) 71
PspEI GGTNACC 1 cut(s) 280
PspN4I GGNNCC 1 cut(s) 43
PspPI GGNCC 3 cut(s) 152, 441, 451
RseI CAYNNNNRTG 1 cut(s) 575
SacI GAGCTC 1 cut(s) 71
SaqAI TTAA 2 cut(s) 207, 548
SatI GCNGC 2 cut(s) 161, 262
Sau3AI GATC 2 cut(s) 83, 388
Sau96I GGNCC 3 cut(s) 152, 441, 451
SchI GAGTC 1 cut(s) 144
ScrFI CCNGG 1 cut(s) 278
SduI GDGCHC 1 cut(s) 71
SetI ASST 9 cut(s) 9, 71, 96, 205, 272, 276, 324, 373, 565
SinI GGWCC 2 cut(s) 152, 451
SmiMI CAYNNNNRTG 1 cut(s) 575
SmlI CTYRAG 1 cut(s) 218
SmoI CTYRAG 1 cut(s) 218
Sse9I AATT 2 cut(s) 549, 580
SsiI CCGC 5 cut(s) 19, 245, 262, 402, 592
SspMI CTAG 1 cut(s) 420
SstI GAGCTC 1 cut(s) 71
StyD4I CCNGG 1 cut(s) 276
TaaI ACNGT 5 cut(s) 41, 109, 152, 458, 467
TaiI ACGT 2 cut(s) 205, 565
TaqI TCGA 4 cut(s) 82, 126, 296, 387
TasI AATT 2 cut(s) 549, 580
TauI GCSGC 1 cut(s) 264
TfiI GAWTC 3 cut(s) 50, 123, 398
Tru1I TTAA 2 cut(s) 207, 548
Tru9I TTAA 2 cut(s) 207, 548
TscAI CASTG 1 cut(s) 461
TseI GCWGC 1 cut(s) 160
TspDTI ATGAA 3 cut(s) 17, 63, 144
TspGWI ACGGA 1 cut(s) 135
TspRI CASTG 1 cut(s) 461
VpaK11BI GGWCC 2 cut(s) 152, 451
VspI ATTAAT 1 cut(s) 548
XapI RAATTY 1 cut(s) 580
XbaI TCTAGA 1 cut(s) 419
XspI CTAG 1 cut(s) 420
ZraI GACGTC 1 cut(s) 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.