Rmu_sc0000698.1_g000095

membrane

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000698.1
N/A
Physical Location & Seq
Forward (+)
378982 .. 379539
558 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 312 bp
atgattcctggaactgtgttcatgtcgttgcttgctggttcccttttcgaagtcttcaaaggtgtagctttggtggtgttcaatgccactgctggtgcttcttcttgctatttcttgtcaaaggtgatagggaggccccttgccacttctctttggcccgacaagctcctgtttttccaaaaccaggctggactagctcttggagaattgcgatctcttggggatctctatgacttcaactcaatagccaccttgttcttcatcggagttgtctcagttacgcccacattagtgagcaagaacaaatcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

11.0

Weight (kDa)

8.93

Isoelectric Point (pI)

23.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 231
AfiI CCNNNNNNNGG 1 cut(s) 184
AgsI TTSAA 3 cut(s) 58, 82, 238
AjnI CCWGG 2 cut(s) 7, 183
AleI CACNNNNGTG 1 cut(s) 290
AluBI AGCT 3 cut(s) 68, 166, 197
AluI AGCT 3 cut(s) 68, 166, 197
Alw26I GTCTC 1 cut(s) 277
AlwI GGATC 1 cut(s) 231
AoxI GGCC 2 cut(s) 134, 155
AspS9I GGNCC 2 cut(s) 135, 156
AsuHPI GGTGA 1 cut(s) 136
AsuII TTCGAA 1 cut(s) 48
BbsI GAAGAC 1 cut(s) 46
BciT130I CCWGG 2 cut(s) 9, 185
BcoDI GTCTC 1 cut(s) 277
BfaI CTAG 1 cut(s) 194
Bme1390I CCNGG 2 cut(s) 9, 185
BmgT120I GGNCC 2 cut(s) 135, 156
BmiI GGNNCC 2 cut(s) 40, 137
BmrFI CCNGG 2 cut(s) 9, 185
BpiI GAAGAC 1 cut(s) 46
Bpu14I TTCGAA 1 cut(s) 48
Bsc4I CCNNNNNNNGG 1 cut(s) 184
BseBI CCWGG 2 cut(s) 9, 185
BseLI CCNNNNNNNGG 1 cut(s) 184
BseMII CTCAG 1 cut(s) 288
BshFI GGCC 2 cut(s) 136, 157
BslI CCNNNNNNNGG 1 cut(s) 184
BsmAI GTCTC 1 cut(s) 277
BsnI GGCC 2 cut(s) 136, 157
Bsp119I TTCGAA 1 cut(s) 48
Bsp143I GATC 2 cut(s) 212, 223
BspANI GGCC 2 cut(s) 136, 157
BspCNI CTCAG 1 cut(s) 287
BspLI GGNNCC 2 cut(s) 40, 137
BspPI GGATC 1 cut(s) 231
BspT104I TTCGAA 1 cut(s) 48
BssMI GATC 2 cut(s) 212, 223
Bst2UI CCWGG 2 cut(s) 9, 185
Bst4CI ACNGT 1 cut(s) 16
BstBI TTCGAA 1 cut(s) 48
BstC8I GCNNGC 1 cut(s) 33
BstDEI CTNAG 1 cut(s) 274
BstKTI GATC 2 cut(s) 215, 226
BstMAI GTCTC 1 cut(s) 277
BstMBI GATC 2 cut(s) 212, 223
BstMWI GCNNNNNNNGC 2 cut(s) 163, 194
BstNI CCWGG 2 cut(s) 9, 185
BstSCI CCNGG 2 cut(s) 7, 183
BstV2I GAAGAC 1 cut(s) 46
BstX2I RGATCY 1 cut(s) 223
BstYI RGATCY 1 cut(s) 223
BsuRI GGCC 2 cut(s) 136, 157
BtsI GCAGTG 1 cut(s) 87
BtsIMutI CAGTG 1 cut(s) 87
Cac8I GCNNGC 1 cut(s) 33
Cfr13I GGNCC 2 cut(s) 135, 156
CviAII CATG 1 cut(s) 22
CviJI RGCY 7 cut(s) 68, 136, 157, 166, 188, 197, 248
CviKI_1 RGCY 7 cut(s) 68, 136, 157, 166, 188, 197, 248
DdeI CTNAG 1 cut(s) 274
DpnI GATC 2 cut(s) 214, 225
DpnII GATC 2 cut(s) 212, 223
EcoO109I RGGNCCY 1 cut(s) 135
EcoRII CCWGG 2 cut(s) 7, 183
FaeI CATG 1 cut(s) 25
FaiI YATR 3 cut(s) 23, 231, 310
FatI CATG 1 cut(s) 21
FspBI CTAG 1 cut(s) 194
HaeIII GGCC 2 cut(s) 136, 157
Hin1II CATG 1 cut(s) 25
HinfI GANTC 1 cut(s) 4
HphI GGTGA 1 cut(s) 136
Hpy188I TCNGA 1 cut(s) 266
HpyCH4III ACNGT 1 cut(s) 16
HpyF10VI GCNNNNNNNGC 2 cut(s) 163, 194
HpyF3I CTNAG 1 cut(s) 274
Hsp92II CATG 1 cut(s) 25
Kzo9I GATC 2 cut(s) 212, 223
LmnI GCTCC 1 cut(s) 171
LpnPI CCDG 7 cut(s) 21, 21, 78, 170, 174, 182, 197
MaeI CTAG 1 cut(s) 194
MaeIII GTNAC 1 cut(s) 277
MalI GATC 2 cut(s) 214, 225
MboI GATC 2 cut(s) 212, 223
MboII GAAGA 3 cut(s) 46, 93, 250
MflI RGATCY 1 cut(s) 223
MluCI AATT 1 cut(s) 206
MnlI CCTC 1 cut(s) 126
MslI CAYNNNNRTG 1 cut(s) 290
MspR9I CCNGG 2 cut(s) 9, 185
MvaI CCWGG 2 cut(s) 9, 185
MwoI GCNNNNNNNGC 2 cut(s) 163, 194
NdeII GATC 2 cut(s) 212, 223
NlaIII CATG 1 cut(s) 25
NlaIV GGNNCC 2 cut(s) 40, 137
NspV TTCGAA 1 cut(s) 48
OliI CACNNNNGTG 1 cut(s) 290
PfeI GAWTC 1 cut(s) 4
PfoI TCCNGGA 1 cut(s) 7
Psp6I CCWGG 2 cut(s) 7, 183
PspGI CCWGG 2 cut(s) 7, 183
PspN4I GGNNCC 2 cut(s) 40, 137
PspPI GGNCC 2 cut(s) 135, 156
PsuI RGATCY 1 cut(s) 223
RseI CAYNNNNRTG 1 cut(s) 290
Sau3AI GATC 2 cut(s) 212, 223
Sau96I GGNCC 2 cut(s) 135, 156
ScrFI CCNGG 2 cut(s) 9, 185
SetI ASST 6 cut(s) 64, 70, 126, 168, 199, 254
SfuI TTCGAA 1 cut(s) 48
SmiMI CAYNNNNRTG 1 cut(s) 290
Sse9I AATT 1 cut(s) 206
SspMI CTAG 1 cut(s) 194
StyD4I CCNGG 2 cut(s) 7, 183
TaaI ACNGT 1 cut(s) 16
TaqI TCGA 1 cut(s) 48
TasI AATT 1 cut(s) 206
TfiI GAWTC 1 cut(s) 4
TscAI CASTG 1 cut(s) 94
TspDTI ATGAA 2 cut(s) 10, 250
TspRI CASTG 1 cut(s) 94
XcmI CCANNNNNNNNNTGG 1 cut(s) 185
XspI CTAG 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.