Rmu_sc0000775.1_g000020

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000775.1
N/A
Physical Location & Seq
Forward (+)
114397 .. 117192
2796 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 855 bp
atgagccacactcatgatactgccagtagtacgagctactgccaactgtgtaacctacggaaacacagccaaacaggttaccgctcgagctccgactcgcccccagatcaccgccgacgcgcgcaccaagttagcatcagaagcttcagaagttggggactgaagcacatcagcatcggagaagagaagaccgcccaacgcggtctccctctgacgccctctgtactttacttgacaggtagtggaagctctgagaacatcacaggaaagtggcacgaaaagttgcctgctgcggctggaatagttgccagaaagttgaccgatgctgaggtggcaatgccactgctgactggcttgcaaacgtggcagtggcttgggctgcggcttgggcttgggttgcagcttgggcctatccttctggcttcttggctgtggctagggctgagctgcgacttgggcctatctttcctcttctctttttttcctttcttttccttctgtcggtttttctgcagtaatttgagtctgccggttcagcaactccgtcgtcttcaaagacattacttacgaccaaaccctcaacctctccctccgtttatacaaaccaagattaacaaaccctacttcctccactgccaagctcccggtggtgctctactttcaaggcagcagtttttgcgtcggctcacctgtctggccaacttccgcaacgcatgtgtccgattggcagctaggctcaacacccttgtggtgtcaccggaccaccgtcttgcgttggaggataagctctcggctgcgctggacgatatgacaagtgcggtggagtggctgcaaagggaggccttcgatgattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

284

Amino Acids

32.01

Weight (kDa)

9.75

Isoelectric Point (pI)

61.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_3 PF07859 236 - 281 3.1e-08 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 84
AccII CGCG 3 cut(s) 120, 122, 201
AciI CCGC 8 cut(s) 82, 112, 192, 201, 293, 382, 706, 818
AcoI YGGCCR 1 cut(s) 696
AcuI CTGAAG 2 cut(s) 130, 182
AcyI GRCGYC 1 cut(s) 215
AfaI GTAC 2 cut(s) 31, 225
AfiI CCNNNNNNNGG 1 cut(s) 501
AgsI TTSAA 2 cut(s) 554, 663
AleI CACNNNNGTG 1 cut(s) 746
AluBI AGCT 9 cut(s) 36, 90, 144, 249, 403, 447, 641, 731, 787
AluI AGCT 9 cut(s) 36, 90, 144, 249, 403, 447, 641, 731, 787
Alw21I GWGCWC 2 cut(s) 92, 655
Alw26I GTCTC 1 cut(s) 209
Ama87I CYCGRG 1 cut(s) 85
AoxI GGCC 4 cut(s) 407, 457, 696, 840
ApeKI GCWGC 8 cut(s) 290, 379, 400, 447, 667, 728, 794, 829
AspLEI GCGC 3 cut(s) 122, 124, 799
AspS9I GGNCC 3 cut(s) 407, 457, 760
AsuC2I CCSGG 1 cut(s) 645
AsuHPI GGTGA 3 cut(s) 101, 679, 747
AvaI CYCGRG 1 cut(s) 85
AvaII GGWCC 1 cut(s) 760
BalI TGGCCA 1 cut(s) 698
BanII GRGCYC 1 cut(s) 92
BbsI GAAGAC 2 cut(s) 194, 542
Bbv12I GWGCWC 2 cut(s) 92, 655
BbvCI CCTCAGC 1 cut(s) 327
BbvI GCAGC 8 cut(s) 277, 366, 412, 434, 679, 740, 781, 816
BcgI CGANNNNNNTGC 2 cut(s) 527, 561
BcnI CCSGG 1 cut(s) 645
BcoDI GTCTC 1 cut(s) 209
BfaI CTAG 2 cut(s) 437, 732
BfmI CTRYAG 1 cut(s) 511
BlpI GCTNAGC 1 cut(s) 443
Bme1390I CCNGG 1 cut(s) 645
Bme18I GGWCC 1 cut(s) 760
BmeT110I CYCGRG 1 cut(s) 85
BmgT120I GGNCC 3 cut(s) 407, 457, 760
BmrFI CCNGG 1 cut(s) 645
BmsI GCATC 3 cut(s) 144, 183, 313
BoxI GACNNNNGTC 1 cut(s) 765
BpiI GAAGAC 2 cut(s) 194, 542
BplI GAGNNNNNCTC 1 cut(s) 27
Bpu10I CCTNAGC 1 cut(s) 327
Bpu1102I GCTNAGC 1 cut(s) 443
BpuMI CCSGG 1 cut(s) 645
BsaHI GRCGYC 1 cut(s) 215
BsaI GGTCTC 1 cut(s) 209
BsaWI WCCGGW 1 cut(s) 757
BsaXI ACNNNNNCTCC 2 cut(s) 189, 219
Bsc4I CCNNNNNNNGG 1 cut(s) 501
Bse118I RCCGGY 1 cut(s) 529
Bse1I ACTGG 2 cut(s) 24, 355
Bse3DI GCAATG 1 cut(s) 342
BseLI CCNNNNNNNGG 1 cut(s) 501
BseMI GCAATG 1 cut(s) 342
BseMII CTCAG 3 cut(s) 243, 318, 434
BseNI ACTGG 2 cut(s) 24, 355
BsePI GCGCGC 1 cut(s) 120
BseXI GCAGC 8 cut(s) 277, 366, 412, 434, 679, 740, 781, 816
Bsh1236I CGCG 3 cut(s) 120, 122, 201
BshFI GGCC 4 cut(s) 409, 459, 698, 842
BsiHKAI GWGCWC 2 cut(s) 92, 655
BsiHKCI CYCGRG 1 cut(s) 85
BsiSI CCGG 3 cut(s) 530, 645, 758
BslFI GGGAC 1 cut(s) 171
BslI CCNNNNNNNGG 1 cut(s) 501
BsmAI GTCTC 1 cut(s) 209
BsmFI GGGAC 1 cut(s) 171
BsnI GGCC 4 cut(s) 409, 459, 698, 842
Bso31I GGTCTC 1 cut(s) 209
BsoBI CYCGRG 1 cut(s) 85
Bsp1286I GDGCHC 2 cut(s) 92, 655
Bsp143I GATC 1 cut(s) 106
Bsp1720I GCTNAGC 1 cut(s) 443
BspACI CCGC 8 cut(s) 82, 112, 192, 201, 293, 382, 706, 818
BspANI GGCC 4 cut(s) 409, 459, 698, 842
BspCNI CTCAG 3 cut(s) 244, 319, 435
BspFNI CGCG 3 cut(s) 120, 122, 201
BspHI TCATGA 1 cut(s) 13
BspMAI CTGCAG 1 cut(s) 515
BspTNI GGTCTC 1 cut(s) 209
BsrBI CCGCTC 1 cut(s) 84
BsrDI GCAATG 1 cut(s) 342
BsrFI RCCGGY 1 cut(s) 529
BsrI ACTGG 2 cut(s) 24, 355
BssAI RCCGGY 1 cut(s) 529
BssHII GCGCGC 1 cut(s) 120
BssMI GATC 1 cut(s) 106
BssNI GRCGYC 1 cut(s) 215
Bst4CI ACNGT 2 cut(s) 48, 767
Bst6I CTCTTC 2 cut(s) 177, 476
BstACI GRCGYC 1 cut(s) 215
BstAPI GCANNNNNTGC 1 cut(s) 676
BstC8I GCNNGC 3 cut(s) 122, 288, 356
BstDEI CTNAG 3 cut(s) 252, 327, 443
BstEII GGTNACC 1 cut(s) 77
BstFNI CGCG 3 cut(s) 120, 122, 201
BstHHI GCGC 3 cut(s) 122, 124, 799
BstKTI GATC 1 cut(s) 109
BstMAI GTCTC 1 cut(s) 209
BstMBI GATC 1 cut(s) 106
BstNSI RCATGY 1 cut(s) 717
BstPAI GACNNNNGTC 1 cut(s) 765
BstPI GGTNACC 1 cut(s) 77
BstSCI CCNGG 1 cut(s) 643
BstSFI CTRYAG 1 cut(s) 511
BstUI CGCG 3 cut(s) 120, 122, 201
BstV1I GCAGC 8 cut(s) 277, 366, 412, 434, 679, 740, 781, 816
BstV2I GAAGAC 2 cut(s) 194, 542
BsuRI GGCC 4 cut(s) 409, 459, 698, 842
BtsI GCAGTG 3 cut(s) 341, 374, 631
BtsIMutI CAGTG 3 cut(s) 341, 374, 631
Cac8I GCNNGC 3 cut(s) 122, 288, 356
CciI TCATGA 1 cut(s) 13
CfoI GCGC 3 cut(s) 122, 124, 799
Cfr10I RCCGGY 1 cut(s) 529
Cfr13I GGNCC 3 cut(s) 407, 457, 760
CseI GACGC 3 cut(s) 126, 223, 668
Csp6I GTAC 2 cut(s) 30, 224
CspCI CAANNNNNGTGG 2 cut(s) 801, 836
CviAII CATG 2 cut(s) 14, 714
CviQI GTAC 2 cut(s) 30, 224
DdeI CTNAG 3 cut(s) 252, 327, 443
DpnI GATC 1 cut(s) 108
DpnII GATC 1 cut(s) 106
EaeI YGGCCR 1 cut(s) 696
Eam1104I CTCTTC 2 cut(s) 177, 476
EarI CTCTTC 2 cut(s) 177, 476
Ecl136II GAGCTC 1 cut(s) 90
Eco147I AGGCCT 1 cut(s) 842
Eco24I GRGCYC 1 cut(s) 92
Eco31I GGTCTC 1 cut(s) 209
Eco47I GGWCC 1 cut(s) 760
Eco53kI GAGCTC 1 cut(s) 90
Eco57I CTGAAG 2 cut(s) 130, 182
Eco88I CYCGRG 1 cut(s) 85
Eco91I GGTNACC 1 cut(s) 77
EcoICRI GAGCTC 1 cut(s) 90
EcoO65I GGTNACC 1 cut(s) 77
EcoT38I GRGCYC 1 cut(s) 92
FaeI CATG 2 cut(s) 17, 717
FaiI YATR 4 cut(s) 15, 599, 715, 809
FaqI GGGAC 1 cut(s) 171
FatI CATG 2 cut(s) 13, 713
FriOI GRGCYC 1 cut(s) 92
FspBI CTAG 2 cut(s) 437, 732
GlaI GCGC 3 cut(s) 121, 123, 798
HaeIII GGCC 4 cut(s) 409, 459, 698, 842
HapII CCGG 3 cut(s) 530, 645, 758
HgaI GACGC 3 cut(s) 126, 223, 668
HhaI GCGC 3 cut(s) 122, 124, 799
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 2 cut(s) 17, 717
Hin6I GCGC 3 cut(s) 120, 122, 797
HinP1I GCGC 3 cut(s) 120, 122, 797
HincII GTYRAC 1 cut(s) 318
HindII GTYRAC 1 cut(s) 318
HindIII AAGCTT 1 cut(s) 142
HinfI GANTC 2 cut(s) 95, 523
HpaII CCGG 3 cut(s) 530, 645, 758
HphI GGTGA 3 cut(s) 101, 679, 747
Hpy166II GTNNAC 1 cut(s) 318
Hpy188I TCNGA 7 cut(s) 94, 140, 149, 179, 213, 253, 722
Hpy188III TCNNGA 1 cut(s) 14
Hpy8I GTNNAC 1 cut(s) 318
Hpy99I CGWCG 3 cut(s) 120, 549, 684
HpyAV CCTTC 3 cut(s) 425, 505, 853
HpyCH4III ACNGT 2 cut(s) 48, 767
HpyCH4IV ACGT 1 cut(s) 362
HpyCH4V TGCA 4 cut(s) 358, 400, 513, 832
HpyF3I CTNAG 3 cut(s) 252, 327, 443
HpySE526I ACGT 1 cut(s) 362
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 2 cut(s) 17, 717
HspAI GCGC 3 cut(s) 120, 122, 797
Kzo9I GATC 1 cut(s) 106
LmnI GCTCC 2 cut(s) 95, 646
Lsp1109I GCAGC 8 cut(s) 277, 366, 412, 434, 679, 740, 781, 816
LweI GCATC 3 cut(s) 144, 183, 313
MaeI CTAG 2 cut(s) 437, 732
MaeII ACGT 1 cut(s) 362
MaeIII GTNAC 3 cut(s) 50, 77, 753
MalI GATC 1 cut(s) 108
MbiI CCGCTC 1 cut(s) 84
MboI GATC 1 cut(s) 106
MboII GAAGA 4 cut(s) 194, 199, 463, 542
MhlI GDGCHC 2 cut(s) 92, 655
MlsI TGGCCA 1 cut(s) 698
MluCI AATT 1 cut(s) 517
MluNI TGGCCA 1 cut(s) 698
MlyI GAGTC 2 cut(s) 89, 532
MmeI TCCRAC 2 cut(s) 117, 756
Mox20I TGGCCA 1 cut(s) 698
MscI TGGCCA 1 cut(s) 698
MseI TTAA 1 cut(s) 612
MslI CAYNNNNRTG 2 cut(s) 12, 746
Msp20I TGGCCA 1 cut(s) 698
MspI CCGG 3 cut(s) 530, 645, 758
MspR9I CCNGG 1 cut(s) 645
MvnI CGCG 3 cut(s) 120, 122, 201
NciI CCSGG 1 cut(s) 645
NdeII GATC 1 cut(s) 106
NlaIII CATG 2 cut(s) 17, 717
NmeAIII GCCGAG 1 cut(s) 770
NmuCI GTSAC 1 cut(s) 753
NspI RCATGY 1 cut(s) 717
OliI CACNNNNGTG 1 cut(s) 746
PaeR7I CTCGAG 1 cut(s) 85
PagI TCATGA 1 cut(s) 13
PauI GCGCGC 1 cut(s) 120
PceI AGGCCT 1 cut(s) 842
PleI GAGTC 2 cut(s) 89, 531
PpsI GAGTC 2 cut(s) 89, 531
PshAI GACNNNNGTC 1 cut(s) 765
Psp124BI GAGCTC 1 cut(s) 92
PspEI GGTNACC 1 cut(s) 77
PspPI GGNCC 3 cut(s) 407, 457, 760
PspXI VCTCGAGB 1 cut(s) 85
PstI CTGCAG 1 cut(s) 515
PteI GCGCGC 1 cut(s) 120
RsaI GTAC 2 cut(s) 31, 225
RsaNI GTAC 2 cut(s) 30, 224
RseI CAYNNNNRTG 2 cut(s) 12, 746
SacI GAGCTC 1 cut(s) 92
SaqAI TTAA 1 cut(s) 612
Sau3AI GATC 1 cut(s) 106
Sau96I GGNCC 3 cut(s) 407, 457, 760
SchI GAGTC 2 cut(s) 89, 532
ScrFI CCNGG 1 cut(s) 645
SduI GDGCHC 2 cut(s) 92, 655
SfaNI GCATC 3 cut(s) 144, 183, 313
SfcI CTRYAG 1 cut(s) 511
Sfr274I CTCGAG 1 cut(s) 85
SinI GGWCC 1 cut(s) 760
SlaI CTCGAG 1 cut(s) 85
SmiMI CAYNNNNRTG 2 cut(s) 12, 746
SmlI CTYRAG 1 cut(s) 85
SmoI CTYRAG 1 cut(s) 85
Sse9I AATT 1 cut(s) 517
SseBI AGGCCT 1 cut(s) 842
SsiI CCGC 8 cut(s) 82, 112, 192, 201, 293, 382, 706, 818
SspMI CTAG 2 cut(s) 437, 732
SstI GAGCTC 1 cut(s) 92
StuI AGGCCT 1 cut(s) 842
StyD4I CCNGG 1 cut(s) 643
TaaI ACNGT 2 cut(s) 48, 767
TaiI ACGT 1 cut(s) 365
TaqI TCGA 2 cut(s) 86, 846
TaqII GACCGA 1 cut(s) 335
TasI AATT 1 cut(s) 517
TatI WGTACW 1 cut(s) 223
TauI GCSGC 2 cut(s) 296, 385
Tru1I TTAA 1 cut(s) 612
Tru9I TTAA 1 cut(s) 612
TscAI CASTG 3 cut(s) 348, 374, 638
TseFI GTSAC 1 cut(s) 753
TseI GCWGC 8 cut(s) 290, 379, 400, 447, 667, 728, 794, 829
Tsp45I GTSAC 1 cut(s) 753
TspGWI ACGGA 3 cut(s) 73, 533, 582
TspRI CASTG 3 cut(s) 348, 374, 638
VpaK11BI GGWCC 1 cut(s) 760
XceI RCATGY 1 cut(s) 717
XcmI CCANNNNNNNNNTGG 1 cut(s) 644
XhoI CTCGAG 1 cut(s) 85
XspI CTAG 2 cut(s) 437, 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.