Rmu_sc0001089.1_g000001

molybdenum cofactor sulfurtransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001089.1
N/A
Physical Location & Seq
Reverse (-)
1 .. 874
874 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 609 bp
atggggagaaacatagaagaaaaggacatcatgaatggaaaactcaaggatatactaaaaggtgaactagaagagctgccttcaggttcttcaccaaaatcaccaaatcaagatggtagaccaaccagcatggtcattaagaaggcaaatactatgtttccagctcatttgatagcagaagccatatccaccctccgcggccttgacctaagatggtcaggtccaataacacctagtgagatgctctatgtccagcaatatgtgtttgcaaagtacccccagtactgcaatggtctagtggaattagaaggagatggtcaaaagctagaaactgacaacaatactaatgaagagtgttcaggtactcccagcaagtccccaaggagcaaagagctctcacctttctctttcagcagcaaccacaccgatctagacagaacccaaatggagccctcaaagctcctagacatcctcaccaagaaatcttcatttcaagggacatttgtgtcaatcccagaagtccaagccaggaatagggccttgaagcattgtggtttgccagaggaagactatttagtcctcttcgtggcaaattataaagatgctatg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

203

Amino Acids

22.68

Weight (kDa)

5.5

Isoelectric Point (pI)

50.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 597
AasI GACNNNNNNGTC 2 cut(s) 505, 575
AccI GTMKAC 1 cut(s) 118
AccII CGCG 1 cut(s) 198
AciI CCGC 2 cut(s) 196, 198
AcuI CTGAAG 1 cut(s) 66
AdeI CACNNNGTG 1 cut(s) 236
AfaI GTAC 3 cut(s) 275, 284, 364
AfiI CCNNNNNNNGG 2 cut(s) 534, 586
AgsI TTSAA 2 cut(s) 494, 544
AjnI CCWGG 1 cut(s) 527
AluBI AGCT 5 cut(s) 76, 164, 325, 394, 460
AluI AGCT 5 cut(s) 76, 164, 325, 394, 460
Alw21I GWGCWC 1 cut(s) 396
AoxI GGCC 2 cut(s) 199, 537
ApeKI GCWGC 2 cut(s) 76, 414
AspS9I GGNCC 2 cut(s) 221, 537
AsuHPI GGTGA 5 cut(s) 74, 84, 93, 390, 466
AvaII GGWCC 1 cut(s) 221
BanII GRGCYC 2 cut(s) 396, 453
BbsI GAAGAC 1 cut(s) 573
Bbv12I GWGCWC 1 cut(s) 396
BbvI GCAGC 2 cut(s) 63, 426
BccI CCATC 3 cut(s) 107, 207, 308
BciT130I CCWGG 1 cut(s) 529
BfaI CTAG 6 cut(s) 68, 234, 296, 326, 431, 464
BisI GCNGC 3 cut(s) 77, 199, 415
BlsI GCNGC 3 cut(s) 78, 200, 416
BmcAI AGTACT 1 cut(s) 284
Bme1390I CCNGG 1 cut(s) 529
Bme18I GGWCC 1 cut(s) 221
BmgT120I GGNCC 2 cut(s) 221, 537
BmiI GGNNCC 1 cut(s) 450
BmrFI CCNGG 1 cut(s) 529
BmrI ACTGGG 1 cut(s) 274
BmsI GCATC 2 cut(s) 231, 592
BmuI ACTGGG 1 cut(s) 274
BpiI GAAGAC 1 cut(s) 573
BpuEI CTTGAG 1 cut(s) 29
BsaJI CCNNGG 2 cut(s) 196, 380
Bsc4I CCNNNNNNNGG 2 cut(s) 534, 586
Bse1I ACTGG 1 cut(s) 280
Bse3DI GCAATG 1 cut(s) 295
BseBI CCWGG 1 cut(s) 529
BseDI CCNNGG 2 cut(s) 196, 380
BseGI GGATG 1 cut(s) 468
BseLI CCNNNNNNNGG 2 cut(s) 534, 586
BseMI GCAATG 1 cut(s) 295
BseNI ACTGG 1 cut(s) 280
BseXI GCAGC 2 cut(s) 63, 426
BseYI CCCAGC 1 cut(s) 368
Bsh1236I CGCG 1 cut(s) 198
BshFI GGCC 2 cut(s) 201, 539
BsiHKAI GWGCWC 1 cut(s) 396
BslFI GGGAC 2 cut(s) 361, 511
BslI CCNNNNNNNGG 2 cut(s) 534, 586
BsmFI GGGAC 2 cut(s) 361, 511
BsnI GGCC 2 cut(s) 201, 539
Bsp1286I GDGCHC 2 cut(s) 396, 453
Bsp143I GATC 1 cut(s) 427
BspACI CCGC 2 cut(s) 196, 198
BspANI GGCC 2 cut(s) 201, 539
BspFNI CGCG 1 cut(s) 198
BspHI TCATGA 1 cut(s) 30
BspLI GGNNCC 1 cut(s) 450
BspQI GCTCTTC 1 cut(s) 66
BsrDI GCAATG 1 cut(s) 295
BsrI ACTGG 1 cut(s) 280
BssECI CCNNGG 2 cut(s) 196, 380
BssMI GATC 1 cut(s) 427
BssT1I CCWWGG 1 cut(s) 380
Bst2UI CCWGG 1 cut(s) 529
Bst6I CTCTTC 3 cut(s) 66, 345, 587
BstDEI CTNAG 1 cut(s) 209
BstDSI CCRYGG 1 cut(s) 196
BstF5I GGATG 1 cut(s) 468
BstFNI CGCG 1 cut(s) 198
BstKTI GATC 1 cut(s) 430
BstMBI GATC 1 cut(s) 427
BstMWI GCNNNNNNNGC 1 cut(s) 457
BstNI CCWGG 1 cut(s) 529
BstSCI CCNGG 1 cut(s) 527
BstUI CGCG 1 cut(s) 198
BstV1I GCAGC 2 cut(s) 63, 426
BstV2I GAAGAC 1 cut(s) 573
BsuRI GGCC 2 cut(s) 201, 539
BtgI CCRYGG 1 cut(s) 196
BtsCI GGATG 1 cut(s) 468
CciI TCATGA 1 cut(s) 30
Cfr13I GGNCC 2 cut(s) 221, 537
Cfr42I CCGCGG 1 cut(s) 199
Csp6I GTAC 3 cut(s) 274, 283, 363
CviAII CATG 2 cut(s) 31, 130
CviQI GTAC 3 cut(s) 274, 283, 363
DdeI CTNAG 1 cut(s) 209
DpnI GATC 1 cut(s) 429
DpnII GATC 1 cut(s) 427
DraIII CACNNNGTG 1 cut(s) 236
DrdI GACNNNNNNGTC 2 cut(s) 505, 575
DseDI GACNNNNNNGTC 2 cut(s) 505, 575
Eam1104I CTCTTC 3 cut(s) 66, 345, 587
EarI CTCTTC 3 cut(s) 66, 345, 587
Ecl136II GAGCTC 1 cut(s) 394
Eco130I CCWWGG 1 cut(s) 380
Eco24I GRGCYC 2 cut(s) 396, 453
Eco47I GGWCC 1 cut(s) 221
Eco53kI GAGCTC 1 cut(s) 394
Eco57I CTGAAG 1 cut(s) 66
EcoICRI GAGCTC 1 cut(s) 394
EcoO109I RGGNCCY 1 cut(s) 537
EcoRII CCWGG 1 cut(s) 527
EcoT14I CCWWGG 1 cut(s) 380
EcoT38I GRGCYC 2 cut(s) 396, 453
ErhI CCWWGG 1 cut(s) 380
FaeI CATG 2 cut(s) 34, 133
FaqI GGGAC 2 cut(s) 361, 511
FatI CATG 2 cut(s) 30, 129
FblI GTMKAC 1 cut(s) 118
Fnu4HI GCNGC 3 cut(s) 77, 199, 415
FokI GGATG 1 cut(s) 455
FriOI GRGCYC 2 cut(s) 396, 453
Fsp4HI GCNGC 3 cut(s) 77, 199, 415
FspBI CTAG 6 cut(s) 68, 234, 296, 326, 431, 464
GluI GCNGC 3 cut(s) 77, 199, 415
GsaI CCCAGC 1 cut(s) 372
HaeIII GGCC 2 cut(s) 201, 539
Hin1II CATG 2 cut(s) 34, 133
HphI GGTGA 5 cut(s) 74, 84, 93, 390, 466
Hpy166II GTNNAC 2 cut(s) 65, 119
Hpy188III TCNNGA 3 cut(s) 31, 110, 431
Hpy8I GTNNAC 2 cut(s) 65, 119
HpyAV CCTTC 3 cut(s) 90, 136, 302
HpyCH4V TGCA 2 cut(s) 269, 288
HpyF10VI GCNNNNNNNGC 1 cut(s) 457
HpyF3I CTNAG 1 cut(s) 209
Hsp92II CATG 2 cut(s) 34, 133
KspI CCGCGG 1 cut(s) 199
Kzo9I GATC 1 cut(s) 427
LguI GCTCTTC 1 cut(s) 66
LmnI GCTCC 3 cut(s) 384, 448, 465
Lsp1109I GCAGC 2 cut(s) 63, 426
LweI GCATC 2 cut(s) 231, 592
MaeI CTAG 6 cut(s) 68, 234, 296, 326, 431, 464
MalI GATC 1 cut(s) 429
MboI GATC 1 cut(s) 427
MboII GAAGA 7 cut(s) 29, 81, 83, 362, 477, 574, 578
MhlI GDGCHC 2 cut(s) 396, 453
MluCI AATT 2 cut(s) 302, 592
MnlI CCTC 5 cut(s) 203, 463, 482, 556, 590
MseI TTAA 1 cut(s) 138
MspA1I CMGCKG 1 cut(s) 198
MspR9I CCNGG 1 cut(s) 529
MvaI CCWGG 1 cut(s) 529
MvnI CGCG 1 cut(s) 198
MwoI GCNNNNNNNGC 1 cut(s) 457
NdeII GATC 1 cut(s) 427
NlaIII CATG 2 cut(s) 34, 133
NlaIV GGNNCC 1 cut(s) 450
PagI TCATGA 1 cut(s) 30
PciSI GCTCTTC 1 cut(s) 66
PkrI GCNGC 3 cut(s) 78, 200, 416
PsiI TTATAA 1 cut(s) 597
Psp124BI GAGCTC 1 cut(s) 396
Psp6I CCWGG 1 cut(s) 527
PspFI CCCAGC 1 cut(s) 368
PspGI CCWGG 1 cut(s) 527
PspN4I GGNNCC 1 cut(s) 450
PspPI GGNCC 2 cut(s) 221, 537
RsaI GTAC 3 cut(s) 275, 284, 364
RsaNI GTAC 3 cut(s) 274, 283, 363
SacI GAGCTC 1 cut(s) 396
SacII CCGCGG 1 cut(s) 199
SapI GCTCTTC 1 cut(s) 66
SaqAI TTAA 1 cut(s) 138
SatI GCNGC 3 cut(s) 77, 199, 415
Sau3AI GATC 1 cut(s) 427
Sau96I GGNCC 2 cut(s) 221, 537
ScaI AGTACT 1 cut(s) 284
ScrFI CCNGG 1 cut(s) 529
SduI GDGCHC 2 cut(s) 396, 453
SfaNI GCATC 2 cut(s) 231, 592
Sfr303I CCGCGG 1 cut(s) 199
SgrBI CCGCGG 1 cut(s) 199
SinI GGWCC 1 cut(s) 221
SmlI CTYRAG 1 cut(s) 44
SmoI CTYRAG 1 cut(s) 44
Sse9I AATT 2 cut(s) 302, 592
SsiI CCGC 2 cut(s) 196, 198
SspMI CTAG 6 cut(s) 68, 234, 296, 326, 431, 464
SstI GAGCTC 1 cut(s) 396
StyD4I CCNGG 1 cut(s) 527
StyI CCWWGG 1 cut(s) 380
TasI AATT 2 cut(s) 302, 592
TatI WGTACW 1 cut(s) 282
TauI GCSGC 1 cut(s) 201
Tru1I TTAA 1 cut(s) 138
Tru9I TTAA 1 cut(s) 138
TseI GCWGC 2 cut(s) 76, 414
TspDTI ATGAA 3 cut(s) 47, 363, 477
VpaK11BI GGWCC 1 cut(s) 221
XbaI TCTAGA 1 cut(s) 430
XcmI CCANNNNNNNNNTGG 1 cut(s) 287
XmiI GTMKAC 1 cut(s) 118
XspI CTAG 6 cut(s) 68, 234, 296, 326, 431, 464
ZrmI AGTACT 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.