Rmu_sc0001582.1_g000014

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001582.1
N/A
Physical Location & Seq
Reverse (-)
75380 .. 75673
294 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 294 bp
atggatgattcgctccagtacgagtatatgaatgaagaagaccccagaaggctatgcgtctcactcgaagaacgctttggcaacttccgtgactccttgcttcctgacctagaagtgagatggcatagcctccacttttgtgattgcaagacaattcttgactacaactcggaagaactttgcattaaatttttgatggaattttgtggaagagatatcacatatgcaatattgattgagaggactctctctaccttccccgtctctaatttgatggttgtaaagaactattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

11.63

Weight (kDa)

4.59

Isoelectric Point (pI)

61.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 188, 200
AfaI GTAC 1 cut(s) 20
AjuI GAANNNNNNNTTGG 2 cut(s) 60, 92
AleI CACNNNNGTG 1 cut(s) 138
Alw26I GTCTC 2 cut(s) 64, 268
ApoI RAATTY 2 cut(s) 188, 200
BbsI GAAGAC 1 cut(s) 45
BccI CCATC 3 cut(s) 114, 190, 268
BcoDI GTCTC 2 cut(s) 64, 268
BfaI CTAG 1 cut(s) 110
BpiI GAAGAC 1 cut(s) 45
Bse1I ACTGG 1 cut(s) 16
BseGI GGATG 1 cut(s) 10
BseNI ACTGG 1 cut(s) 16
BsmAI GTCTC 2 cut(s) 64, 268
BsmBI CGTCTC 2 cut(s) 64, 268
BsrI ACTGG 1 cut(s) 16
Bst6I CTCTTC 1 cut(s) 205
BstF5I GGATG 1 cut(s) 10
BstMAI GTCTC 2 cut(s) 64, 268
BstV2I GAAGAC 1 cut(s) 45
BtsCI GGATG 1 cut(s) 10
CseI GACGC 1 cut(s) 46
Csp6I GTAC 1 cut(s) 19
CviJI RGCY 2 cut(s) 52, 129
CviKI_1 RGCY 2 cut(s) 52, 129
CviQI GTAC 1 cut(s) 19
Eam1104I CTCTTC 1 cut(s) 205
EarI CTCTTC 1 cut(s) 205
Eco32I GATATC 1 cut(s) 217
EcoRV GATATC 1 cut(s) 217
Esp3I CGTCTC 2 cut(s) 64, 268
FaiI YATR 6 cut(s) 27, 29, 55, 126, 223, 225
FauNDI CATATG 1 cut(s) 223
FokI GGATG 1 cut(s) 17
FspBI CTAG 1 cut(s) 110
HgaI GACGC 1 cut(s) 46
HinfI GANTC 3 cut(s) 8, 92, 244
Hpy188I TCNGA 1 cut(s) 172
Hpy188III TCNNGA 2 cut(s) 104, 158
HpyAV CCTTC 2 cut(s) 42, 265
HpyCH4V TGCA 3 cut(s) 147, 183, 227
LmnI GCTCC 1 cut(s) 18
LpnPI CCDG 3 cut(s) 29, 58, 117
MaeI CTAG 1 cut(s) 110
MaeIII GTNAC 1 cut(s) 89
MboII GAAGA 5 cut(s) 47, 50, 80, 185, 222
MluCI AATT 4 cut(s) 153, 188, 200, 268
MlyI GAGTC 2 cut(s) 86, 238
MnlI CCTC 2 cut(s) 140, 234
MseI TTAA 1 cut(s) 186
MslI CAYNNNNRTG 1 cut(s) 138
NdeI CATATG 1 cut(s) 223
NmuCI GTSAC 1 cut(s) 89
OliI CACNNNNGTG 1 cut(s) 138
PfeI GAWTC 1 cut(s) 8
PleI GAGTC 2 cut(s) 86, 238
PpsI GAGTC 2 cut(s) 86, 238
RsaI GTAC 1 cut(s) 20
RsaNI GTAC 1 cut(s) 19
RseI CAYNNNNRTG 1 cut(s) 138
SaqAI TTAA 1 cut(s) 186
SchI GAGTC 2 cut(s) 86, 238
SetI ASST 2 cut(s) 111, 257
SmiMI CAYNNNNRTG 1 cut(s) 138
Sse9I AATT 4 cut(s) 153, 188, 200, 268
SspI AATATT 1 cut(s) 231
SspMI CTAG 1 cut(s) 110
TaqI TCGA 1 cut(s) 66
TasI AATT 4 cut(s) 153, 188, 200, 268
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 1 cut(s) 186
Tru9I TTAA 1 cut(s) 186
TseFI GTSAC 1 cut(s) 89
Tsp45I GTSAC 1 cut(s) 89
TspDTI ATGAA 2 cut(s) 44, 48
TspGWI ACGGA 1 cut(s) 77
XapI RAATTY 2 cut(s) 188, 200
XspI CTAG 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.