Rmu_sc0001659.1_g000023
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001659.1
N/A
Physical Location & Seq
Forward (+)
99036 .. 99362
327 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 327 bp
atggcctcttcaggcaggtataattaccgagatgccactactcatagaagctctttcaaggtggataggcctctttctgtcaattccaaccccaagtcttttgtaaagtccaagcctttgcttcctcatcgccagaccaacactggctctattgatggtggtgctactagagctgcctctaaagataatacaggagttcctagaagagtccgagtagttgtaagattgcggccgtgtaactctgatgaaatgatctcagatgctgatattgttgaattacagccagaggttaaaagattgaaacttcaagtaagtaaccgaatgtga

Protein Analysis

108

Amino Acids

12.07

Weight (kDa)

10.68

Isoelectric Point (pI)

29.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 6
AciI CCGC 1 cut(s) 229
AcoI YGGCCR 1 cut(s) 230
AgsI TTSAA 4 cut(s) 58, 275, 301, 308
AluBI AGCT 2 cut(s) 51, 173
AluI AGCT 2 cut(s) 51, 173
AlwNI CAGNNNCTG 1 cut(s) 263
AoxI GGCC 3 cut(s) 3, 68, 230
ApeKI GCWGC 1 cut(s) 173
BbvI GCAGC 1 cut(s) 160
BccI CCATC 1 cut(s) 149
BceAI ACGGC 1 cut(s) 217
BfaI CTAG 2 cut(s) 168, 201
BfuAI ACCTGC 1 cut(s) 6
BisI GCNGC 2 cut(s) 174, 230
BlsI GCNGC 2 cut(s) 175, 231
BmsI GCATC 2 cut(s) 22, 250
Bse1I ACTGG 1 cut(s) 148
BseMII CTCAG 1 cut(s) 270
BseNI ACTGG 1 cut(s) 148
BseX3I CGGCCG 1 cut(s) 230
BseXI GCAGC 1 cut(s) 160
Bsh1285I CGRYCG 1 cut(s) 233
BshFI GGCC 3 cut(s) 5, 70, 232
BsiEI CGRYCG 1 cut(s) 233
BsnI GGCC 3 cut(s) 5, 70, 232
Bsp143I GATC 1 cut(s) 252
BspACI CCGC 1 cut(s) 229
BspANI GGCC 3 cut(s) 5, 70, 232
BspCNI CTCAG 1 cut(s) 269
BspMI ACCTGC 1 cut(s) 6
BsrI ACTGG 1 cut(s) 148
BssMI GATC 1 cut(s) 252
Bst6I CTCTTC 2 cut(s) 13, 199
BstDEI CTNAG 1 cut(s) 256
BstKTI GATC 1 cut(s) 255
BstMBI GATC 1 cut(s) 252
BstMCI CGRYCG 1 cut(s) 233
BstMWI GCNNNNNNNGC 1 cut(s) 170
BstV1I GCAGC 1 cut(s) 160
BstZI CGGCCG 1 cut(s) 230
BsuRI GGCC 3 cut(s) 5, 70, 232
BtgZI GCGATG 1 cut(s) 113
BtsIMutI CAGTG 1 cut(s) 141
BveI ACCTGC 1 cut(s) 6
CaiI CAGNNNCTG 1 cut(s) 263
CviJI RGCY 8 cut(s) 5, 51, 70, 115, 147, 173, 232, 283
CviKI_1 RGCY 8 cut(s) 5, 51, 70, 115, 147, 173, 232, 283
DdeI CTNAG 1 cut(s) 256
DpnI GATC 1 cut(s) 254
DpnII GATC 1 cut(s) 252
EaeI YGGCCR 1 cut(s) 230
EagI CGGCCG 1 cut(s) 230
Eam1104I CTCTTC 2 cut(s) 13, 199
EarI CTCTTC 2 cut(s) 13, 199
EclXI CGGCCG 1 cut(s) 230
Eco147I AGGCCT 1 cut(s) 70
Eco52I CGGCCG 1 cut(s) 230
FaiI YATR 2 cut(s) 21, 45
Fnu4HI GCNGC 2 cut(s) 174, 230
Fsp4HI GCNGC 2 cut(s) 174, 230
FspBI CTAG 2 cut(s) 168, 201
GluI GCNGC 2 cut(s) 174, 230
HaeIII GGCC 3 cut(s) 5, 70, 232
HinfI GANTC 1 cut(s) 207
Hpy188I TCNGA 3 cut(s) 212, 244, 259
HpyF10VI GCNNNNNNNGC 1 cut(s) 170
HpyF3I CTNAG 1 cut(s) 256
Kzo9I GATC 1 cut(s) 252
LpnPI CCDG 4 cut(s) 129, 146, 177, 297
Lsp1109I GCAGC 1 cut(s) 160
LweI GCATC 2 cut(s) 22, 250
MaeI CTAG 2 cut(s) 168, 201
MaeIII GTNAC 2 cut(s) 236, 314
MalI GATC 1 cut(s) 254
MboI GATC 1 cut(s) 252
MboII GAAGA 1 cut(s) 216
MluCI AATT 3 cut(s) 22, 82, 275
MlyI GAGTC 1 cut(s) 216
MmeI TCCRAC 1 cut(s) 111
MnlI CCTC 5 cut(s) 16, 81, 135, 187, 280
MseI TTAA 1 cut(s) 291
MwoI GCNNNNNNNGC 1 cut(s) 170
NdeII GATC 1 cut(s) 252
PceI AGGCCT 1 cut(s) 70
PkrI GCNGC 2 cut(s) 175, 231
PleI GAGTC 1 cut(s) 215
PpsI GAGTC 1 cut(s) 215
PstNI CAGNNNCTG 1 cut(s) 263
SaqAI TTAA 1 cut(s) 291
SatI GCNGC 2 cut(s) 174, 230
Sau3AI GATC 1 cut(s) 252
SchI GAGTC 1 cut(s) 216
SetI ASST 5 cut(s) 20, 53, 63, 175, 291
SfaNI GCATC 2 cut(s) 22, 250
Sse9I AATT 3 cut(s) 22, 82, 275
SseBI AGGCCT 1 cut(s) 70
SsiI CCGC 1 cut(s) 229
SspMI CTAG 2 cut(s) 168, 201
StuI AGGCCT 1 cut(s) 70
TasI AATT 3 cut(s) 22, 82, 275
TauI GCSGC 1 cut(s) 232
Tru1I TTAA 1 cut(s) 291
Tru9I TTAA 1 cut(s) 291
TscAI CASTG 1 cut(s) 148
TseI GCWGC 1 cut(s) 173
TspDTI ATGAA 1 cut(s) 261
TspRI CASTG 1 cut(s) 148
XcmI CCANNNNNNNNNTGG 1 cut(s) 140
XspI CTAG 2 cut(s) 168, 201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.