Rmu_sc0001753.1_g000017

Mitosis protein DIM1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001753.1
N/A
Physical Location & Seq
Reverse (-)
86911 .. 88544
1634 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 567 bp
atgacaaaatgcaatgtacgcgtggcggaatatgactggtgcgcttgcaccaagcgagaggtcgtgatgcttctggagatttccaatgttcgtttggggagcagtatggtggaaagattgattctttactttgttgctgttgctgttgctgttgctgctgcttgtggaggatgggccgtcgaccaggggattctggccgaggaagaacgtgttgtcatcattcgattcggccatgattgggacgagacttgcatgcagatggatgaagtactagcatcagttgctgacaaaattaaaaactttgctgtcatttaccttgtggacatttcagaggttcctgatttcaacacaatgtatgagctgtatgacccatccacagttatgttctttttcagaaacaagcacattatgattgaccttggcactgggaacaacaacaagattaactgggctctcaaggacaagcaagagttcattgacattgtggagacagtgtaccgtggtgcaaggaaggggcgcggtctggtgattgctcccaaggattactccaccaagtaccgctactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
DIM1

Protein Analysis

188

Amino Acids

21.5

Weight (kDa)

5.29

Isoelectric Point (pI)

27.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIM1 PF02966 57 - 182 3.8e-64 Mitosis protein DIM1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 180
AccII CGCG 2 cut(s) 21, 519
AciI CCGC 3 cut(s) 26, 519, 559
AcoI YGGCCR 2 cut(s) 195, 229
AfaI GTAC 4 cut(s) 18, 270, 497, 557
AfiI CCNNNNNNNGG 1 cut(s) 238
AflIII ACRYGT 2 cut(s) 19, 208
AgsI TTSAA 1 cut(s) 346
AjnI CCWGG 1 cut(s) 183
AluBI AGCT 1 cut(s) 361
AluI AGCT 1 cut(s) 361
Alw26I GTCTC 2 cut(s) 239, 482
AlwNI CAGNNNCTG 1 cut(s) 284
AoxI GGCC 3 cut(s) 174, 195, 229
ApeKI GCWGC 2 cut(s) 155, 158
AspLEI GCGC 2 cut(s) 44, 519
AspS9I GGNCC 1 cut(s) 174
AsuHPI GGTGA 1 cut(s) 538
BanII GRGCYC 1 cut(s) 454
BbvI GCAGC 2 cut(s) 142, 145
BccI CCATC 3 cut(s) 165, 253, 379
BceAI ACGGC 1 cut(s) 161
BciT130I CCWGG 1 cut(s) 185
BcoDI GTCTC 2 cut(s) 239, 482
BfaI CTAG 1 cut(s) 272
BisI GCNGC 2 cut(s) 156, 159
BlsI GCNGC 2 cut(s) 157, 160
BmcAI AGTACT 1 cut(s) 270
Bme1390I CCNGG 1 cut(s) 185
BmgT120I GGNCC 1 cut(s) 174
BmiI GGNNCC 1 cut(s) 336
BmrFI CCNGG 1 cut(s) 185
BmrI ACTGGG 2 cut(s) 435, 457
BmsI GCATC 2 cut(s) 57, 284
BmuI ACTGGG 2 cut(s) 435, 457
BpmI CTGGAG 1 cut(s) 95
BpuEI CTTGAG 1 cut(s) 440
BsaJI CCNNGG 5 cut(s) 184, 198, 418, 499, 537
BsaXI ACNNNNNCTCC 2 cut(s) 479, 509
Bsc4I CCNNNNNNNGG 1 cut(s) 238
Bse1I ACTGG 3 cut(s) 41, 430, 452
Bse3DI GCAATG 1 cut(s) 19
BseBI CCWGG 1 cut(s) 185
BseDI CCNNGG 5 cut(s) 184, 198, 418, 499, 537
BseGI GGATG 3 cut(s) 176, 268, 371
BseLI CCNNNNNNNGG 1 cut(s) 238
BseMI GCAATG 1 cut(s) 19
BseNI ACTGG 3 cut(s) 41, 430, 452
BseXI GCAGC 2 cut(s) 142, 145
Bsh1236I CGCG 2 cut(s) 21, 519
BshFI GGCC 3 cut(s) 176, 197, 231
BslFI GGGAC 1 cut(s) 254
BslI CCNNNNNNNGG 1 cut(s) 238
BsmAI GTCTC 2 cut(s) 239, 482
BsmFI GGGAC 1 cut(s) 254
BsnI GGCC 3 cut(s) 176, 197, 231
Bsp1286I GDGCHC 1 cut(s) 454
BspACI CCGC 3 cut(s) 26, 519, 559
BspANI GGCC 3 cut(s) 176, 197, 231
BspFNI CGCG 2 cut(s) 21, 519
BspLI GGNNCC 1 cut(s) 336
BsrDI GCAATG 1 cut(s) 19
BsrI ACTGG 3 cut(s) 41, 430, 452
BssECI CCNNGG 5 cut(s) 184, 198, 418, 499, 537
BssT1I CCWWGG 2 cut(s) 418, 537
Bst2UI CCWGG 1 cut(s) 185
Bst4CI ACNGT 3 cut(s) 379, 493, 500
BstAPI GCANNNNNTGC 1 cut(s) 281
BstC8I GCNNGC 2 cut(s) 46, 254
BstDSI CCRYGG 1 cut(s) 499
BstF5I GGATG 3 cut(s) 176, 268, 371
BstFNI CGCG 2 cut(s) 21, 519
BstHHI GCGC 2 cut(s) 44, 519
BstMAI GTCTC 2 cut(s) 239, 482
BstMWI GCNNNNNNNGC 3 cut(s) 18, 155, 281
BstNI CCWGG 1 cut(s) 185
BstNSI RCATGY 1 cut(s) 256
BstSCI CCNGG 1 cut(s) 183
BstUI CGCG 2 cut(s) 21, 519
BstV1I GCAGC 2 cut(s) 142, 145
BsuRI GGCC 3 cut(s) 176, 197, 231
BtgI CCRYGG 1 cut(s) 499
BtsCI GGATG 3 cut(s) 176, 268, 371
BtsIMutI CAGTG 2 cut(s) 423, 498
Cac8I GCNNGC 2 cut(s) 46, 254
CaiI CAGNNNCTG 1 cut(s) 284
CfoI GCGC 2 cut(s) 44, 519
Cfr13I GGNCC 1 cut(s) 174
Csp6I GTAC 4 cut(s) 17, 269, 496, 556
CviAII CATG 2 cut(s) 233, 253
CviJI RGCY 5 cut(s) 176, 197, 231, 361, 452
CviKI_1 RGCY 5 cut(s) 176, 197, 231, 361, 452
CviQI GTAC 4 cut(s) 17, 269, 496, 556
EaeI YGGCCR 2 cut(s) 195, 229
EciI GGCGGA 1 cut(s) 41
Eco130I CCWWGG 2 cut(s) 418, 537
Eco24I GRGCYC 1 cut(s) 454
EcoRII CCWGG 1 cut(s) 183
EcoT14I CCWWGG 2 cut(s) 418, 537
EcoT38I GRGCYC 1 cut(s) 454
ErhI CCWWGG 2 cut(s) 418, 537
FaeI CATG 2 cut(s) 236, 256
FaiI YATR 8 cut(s) 33, 107, 234, 254, 357, 366, 383, 410
FaqI GGGAC 1 cut(s) 254
FatI CATG 2 cut(s) 232, 252
FblI GTMKAC 1 cut(s) 180
Fnu4HI GCNGC 2 cut(s) 156, 159
FokI GGATG 3 cut(s) 183, 275, 358
FriOI GRGCYC 1 cut(s) 454
Fsp4HI GCNGC 2 cut(s) 156, 159
FspBI CTAG 1 cut(s) 272
GlaI GCGC 2 cut(s) 43, 518
GluI GCNGC 2 cut(s) 156, 159
GsuI CTGGAG 1 cut(s) 95
HaeIII GGCC 3 cut(s) 176, 197, 231
HhaI GCGC 2 cut(s) 44, 519
Hin1II CATG 2 cut(s) 236, 256
Hin6I GCGC 2 cut(s) 42, 517
HinP1I GCGC 2 cut(s) 42, 517
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HinfI GANTC 3 cut(s) 121, 190, 225
HphI GGTGA 1 cut(s) 538
Hpy166II GTNNAC 3 cut(s) 181, 322, 496
Hpy188I TCNGA 2 cut(s) 331, 395
Hpy188III TCNNGA 3 cut(s) 64, 74, 338
Hpy8I GTNNAC 3 cut(s) 181, 322, 496
Hpy99I CGWCG 1 cut(s) 182
HpyAV CCTTC 1 cut(s) 505
HpyCH4III ACNGT 3 cut(s) 379, 493, 500
HpyCH4IV ACGT 1 cut(s) 208
HpyCH4V TGCA 5 cut(s) 12, 48, 252, 256, 506
HpyF10VI GCNNNNNNNGC 3 cut(s) 18, 155, 281
HpySE526I ACGT 1 cut(s) 208
Hsp92II CATG 2 cut(s) 236, 256
HspAI GCGC 2 cut(s) 42, 517
LmnI GCTCC 2 cut(s) 99, 538
LpnPI CCDG 9 cut(s) 22, 59, 170, 179, 197, 351, 411, 433, 509
Lsp1109I GCAGC 2 cut(s) 142, 145
LweI GCATC 2 cut(s) 57, 284
MaeI CTAG 1 cut(s) 272
MaeII ACGT 1 cut(s) 208
MboII GAAGA 1 cut(s) 215
MhlI GDGCHC 1 cut(s) 454
MluCI AATT 1 cut(s) 291
MluI ACGCGT 1 cut(s) 19
MnlI CCTC 4 cut(s) 52, 161, 193, 325
MseI TTAA 2 cut(s) 294, 444
MslI CAYNNNNRTG 2 cut(s) 257, 380
MspR9I CCNGG 1 cut(s) 185
MvaI CCWGG 1 cut(s) 185
MvnI CGCG 2 cut(s) 21, 519
MwoI GCNNNNNNNGC 3 cut(s) 18, 155, 281
NlaIII CATG 2 cut(s) 236, 256
NlaIV GGNNCC 1 cut(s) 336
NmeAIII GCCGAG 1 cut(s) 223
NspI RCATGY 1 cut(s) 256
PaeI GCATGC 1 cut(s) 256
PfeI GAWTC 3 cut(s) 121, 190, 225
PkrI GCNGC 2 cut(s) 157, 160
Psp6I CCWGG 1 cut(s) 183
PspGI CCWGG 1 cut(s) 183
PspN4I GGNNCC 1 cut(s) 336
PspPI GGNCC 1 cut(s) 174
PstNI CAGNNNCTG 1 cut(s) 284
RsaI GTAC 4 cut(s) 18, 270, 497, 557
RsaNI GTAC 4 cut(s) 17, 269, 496, 556
RseI CAYNNNNRTG 2 cut(s) 257, 380
SalI GTCGAC 1 cut(s) 179
SaqAI TTAA 2 cut(s) 294, 444
SatI GCNGC 2 cut(s) 156, 159
Sau96I GGNCC 1 cut(s) 174
ScaI AGTACT 1 cut(s) 270
ScrFI CCNGG 1 cut(s) 185
SduI GDGCHC 1 cut(s) 454
SetI ASST 6 cut(s) 63, 211, 318, 336, 363, 420
SfaNI GCATC 2 cut(s) 57, 284
SmiMI CAYNNNNRTG 2 cut(s) 257, 380
SmlI CTYRAG 1 cut(s) 455
SmoI CTYRAG 1 cut(s) 455
SphI GCATGC 1 cut(s) 256
Sse9I AATT 1 cut(s) 291
SsiI CCGC 3 cut(s) 26, 519, 559
SspMI CTAG 1 cut(s) 272
StyD4I CCNGG 1 cut(s) 183
StyI CCWWGG 2 cut(s) 418, 537
TaaI ACNGT 3 cut(s) 379, 493, 500
TaiI ACGT 1 cut(s) 211
TaqI TCGA 2 cut(s) 180, 223
TasI AATT 1 cut(s) 291
TatI WGTACW 1 cut(s) 268
TfiI GAWTC 3 cut(s) 121, 190, 225
Tru1I TTAA 2 cut(s) 294, 444
Tru9I TTAA 2 cut(s) 294, 444
TscAI CASTG 2 cut(s) 430, 498
TseI GCWGC 2 cut(s) 155, 158
TspDTI ATGAA 2 cut(s) 279, 463
TspRI CASTG 2 cut(s) 430, 498
XceI RCATGY 1 cut(s) 256
XcmI CCANNNNNNNNNTGG 1 cut(s) 91
XmiI GTMKAC 1 cut(s) 180
XspI CTAG 1 cut(s) 272
ZrmI AGTACT 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.