Rmu_sc0001821.1_g000001

ATP-dependent DNA helicase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001821.1
N/A
Physical Location & Seq
Reverse (-)
1 .. 333
333 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 238 bp
atggtcatctcagaagaagtaaacgaagcgctggacagctcatctaacagtagtatgtcagaggctgattgcatttcagagcatgatttagacaatatcgaggatggtaattccaacagatatgatgaagcaagttcactccaggaaaatggttcaagtgcttcaaagggaagggggctgtcagttgactacttggaaaatgatgttgacatctttcagagtgttaatgattgggatg

Protein Analysis

79

Amino Acids

8.64

Weight (kDa)

4.05

Isoelectric Point (pI)

58.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfeI AGCGCT 1 cut(s) 30
AgsI TTSAA 2 cut(s) 156, 165
AjnI CCWGG 1 cut(s) 141
AluBI AGCT 1 cut(s) 39
AluI AGCT 1 cut(s) 39
AlwNI CAGNNNCTG 1 cut(s) 65
Aor51HI AGCGCT 1 cut(s) 30
AspLEI GCGC 1 cut(s) 31
BccI CCATC 1 cut(s) 98
BciT130I CCWGG 1 cut(s) 143
BfoI RGCGCY 1 cut(s) 32
Bme1390I CCNGG 1 cut(s) 143
BmrFI CCNGG 1 cut(s) 143
BpmI CTGGAG 1 cut(s) 125
BseBI CCWGG 1 cut(s) 143
BseGI GGATG 1 cut(s) 109
BseMII CTCAG 1 cut(s) 24
BspCNI CTCAG 1 cut(s) 23
Bst2UI CCWGG 1 cut(s) 143
Bst4CI ACNGT 1 cut(s) 50
BstDEI CTNAG 1 cut(s) 10
BstF5I GGATG 1 cut(s) 109
BstH2I RGCGCY 1 cut(s) 32
BstHHI GCGC 1 cut(s) 31
BstNI CCWGG 1 cut(s) 143
BstSCI CCNGG 1 cut(s) 141
BstXI CCANNNNNNTGG 1 cut(s) 149
BtsCI GGATG 1 cut(s) 109
CaiI CAGNNNCTG 1 cut(s) 65
CfoI GCGC 1 cut(s) 31
CviAII CATG 1 cut(s) 83
CviJI RGCY 3 cut(s) 39, 65, 178
CviKI_1 RGCY 3 cut(s) 39, 65, 178
DdeI CTNAG 1 cut(s) 10
Eco47III AGCGCT 1 cut(s) 30
EcoRII CCWGG 1 cut(s) 141
FaeI CATG 1 cut(s) 86
FaiI YATR 3 cut(s) 56, 84, 123
FatI CATG 1 cut(s) 82
FokI GGATG 1 cut(s) 116
GlaI GCGC 1 cut(s) 30
GsuI CTGGAG 1 cut(s) 125
HaeII RGCGCY 1 cut(s) 32
HhaI GCGC 1 cut(s) 31
Hin1II CATG 1 cut(s) 86
Hin6I GCGC 1 cut(s) 29
HinP1I GCGC 1 cut(s) 29
HincII GTYRAC 2 cut(s) 187, 208
HindII GTYRAC 2 cut(s) 187, 208
Hpy166II GTNNAC 4 cut(s) 22, 137, 187, 208
Hpy188I TCNGA 4 cut(s) 13, 61, 79, 219
Hpy8I GTNNAC 4 cut(s) 22, 137, 187, 208
HpyAV CCTTC 1 cut(s) 165
HpyCH4III ACNGT 1 cut(s) 50
HpyCH4V TGCA 1 cut(s) 72
HpyF3I CTNAG 1 cut(s) 10
Hsp92II CATG 1 cut(s) 86
HspAI GCGC 1 cut(s) 29
LpnPI CCDG 3 cut(s) 17, 128, 155
MboII GAAGA 1 cut(s) 26
MluCI AATT 1 cut(s) 109
MmeI TCCRAC 1 cut(s) 138
MnlI CCTC 2 cut(s) 55, 94
MseI TTAA 1 cut(s) 225
MspR9I CCNGG 1 cut(s) 143
MvaI CCWGG 1 cut(s) 143
NlaIII CATG 1 cut(s) 86
PfoI TCCNGGA 1 cut(s) 141
Psp6I CCWGG 1 cut(s) 141
PspGI CCWGG 1 cut(s) 141
PstNI CAGNNNCTG 1 cut(s) 65
SaqAI TTAA 1 cut(s) 225
ScrFI CCNGG 1 cut(s) 143
SetI ASST 1 cut(s) 41
SgeI CNNG 8 cut(s) 44, 95, 112, 144, 154, 155, 168, 205
Sse9I AATT 1 cut(s) 109
StyD4I CCNGG 1 cut(s) 141
TaaI ACNGT 1 cut(s) 50
TaqI TCGA 1 cut(s) 99
TasI AATT 1 cut(s) 109
Tru1I TTAA 1 cut(s) 225
Tru9I TTAA 1 cut(s) 225
TspDTI ATGAA 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.