Rmu_sc0002072.1_g000045

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002072.1
N/A
Physical Location & Seq
Forward (+)
165053 .. 169448
4396 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2037 bp
atggtgatcacatcggttgcaaataaatggagagagttcgagagcaagttaaccaagttatacattatcccttacatgaatgaacctgatctcttggaatttccaccggacgattaccgaagcataacgaaagacaattggcaaacgtttgttgctgacaggctttcagctggttttctggaagtacgtgaggctcaaattatgaagcgaaaggagaataaatacgctcaccgtatgtcacgtaaagggcacggggcgagagagcagggaaaagatgtccttcttcgacaggttctggtacctttcgggaggcaacaaatcaagcagatcatggtaattaggggcagcttcgattcccgaacctcatccgacgacgccgggccgctgaaagcccagttgagcttggccgggttgcaaatctccagcggagtcagggaggctgaaggggagatcaccacatgtgggtctgatgatgtgctgactatcgcattggggaatcccgagcatcatggtcaggttagaggtgtaggtgagactgtgaagccagctgcatatttcaacttgccaaaacggcagagaaagagtgtggaagagactctagaagcaaagattgatgggaatgagttgcctattgatacacccaaagctgccacacaggtcaatgaacttggttcaggacaagggagttgttctcgacagggtgtaaattgtaatggggaaactgagatagtgatggctgcaaagaagaagttggtcttaagagattgtacataccgcctatattacataccgccaagcataatcaatgacctcataggtgggccccgcgacatggttagccccgcctatgacatgcatccggtagaccgacacccgagctacattgccatggtggaggtcggccgtagaaacattggcgctagaatgagggtccctaagtttgggtatgagcctccgaccttgagcaagggtcatgtacgggaaccaccaatcatgtacgcgcaggacacccctcaccttcctcacccaagcctccgaggagccaccgcctacatgagccaccgggtactacgagtcagcgggtacatgcatattccactcccaagtacctttaactccacacccaagttccactcttctccggggctctcaggagtcagcgggtacgcacacctcccggtacctctcttcatcccactgccatgcaacacaacactacccgctcaagaatcaaggtctacttacacctatacgtacctgggtagcaagtctggcacaccacatctctgccaggctgatccttcaacgagtcacgtacggaaaactcctcaccacgcactaggcaacccgccccaacttggcaactcaccaagcatctcggtggcactcgaattcctggaccgcgtgcgtaccgcttatatcctcactggcatcaccttcaacactctgtacgggtaccagaggctcaccccggatccacctacagacccgtttgagcaagtcatcacgatcccagtcaccggtgccattagtttttggcaccagcagcaccatgaccaatatccgggtcactcccggcaccaagagcccagccacacctgcaaactctccgggattgtcatcataattacagccgagattgtcatcataattaccccgctcttggtacctcgctatctccaccgggattcagaaaaaagggcagcgtgcatctcatcatccactccaggactcccgccaggagcaaggaccggttcaatctgtccaaaggtggacctatacctaatacccgaacgggacccctcatcatatttttctccgagcacacctacgcatctgtcagcatatccggcacttctagaagtcgcataccgcccgggatgcttgtatcgaaggctcgtaaccaaaattcaatcgggccaagtctcatttcaaaaaaaaaaggaagaagaagaattacgggcacccataccacaagtgctatggacacccagctcagcagcaactacaaggcaacaccaggagctagcagcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

678

Amino Acids

75.26

Weight (kDa)

9.09

Isoelectric Point (pI)

46.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1607
Acc36I ACCTGC 1 cut(s) 1607
Acc65I GGTACC 4 cut(s) 298, 1180, 1455, 1666
AccB1I GGYRCC 8 cut(s) 298, 1180, 1455, 1523, 1539, 1578, 1666, 1963
AccBSI CCGCTC 2 cut(s) 1223, 1660
AccI GTMKAC 2 cut(s) 864, 1238
AccII CGCG 3 cut(s) 828, 1001, 1404
AclI AACGTT 1 cut(s) 146
AclWI GGATC 4 cut(s) 1292, 1469, 1482, 1504
AcoI YGGCCR 2 cut(s) 405, 901
AcsI RAATTY 3 cut(s) 98, 1391, 1908
AcuI CTGAAG 1 cut(s) 462
AcyI GRCGYC 1 cut(s) 375
AfiI CCNNNNNNNGG 7 cut(s) 462, 832, 941, 1358, 1520, 1564, 1663
AflII CTTAAG 1 cut(s) 757
AflIII ACRYGT 1 cut(s) 458
AgeI ACCGGT 2 cut(s) 1520, 1751
AgsI TTSAA 6 cut(s) 559, 1305, 1441, 1758, 1913, 1934
AjnI CCWGG 6 cut(s) 1257, 1290, 1395, 1726, 1738, 2019
AjuI GAANNNNNNNTTGG 2 cut(s) 1914, 1946
AluBI AGCT 9 cut(s) 170, 348, 402, 548, 647, 879, 1995, 2026, 2033
AluI AGCT 9 cut(s) 170, 348, 402, 548, 647, 879, 1995, 2026, 2033
Alw21I GWGCWC 1 cut(s) 1826
Alw26I GTCTC 3 cut(s) 527, 587, 1930
AlwI GGATC 4 cut(s) 1292, 1469, 1482, 1504
AlwNI CAGNNNCTG 1 cut(s) 295
Ama87I CYCGRG 3 cut(s) 500, 874, 1876
AoxI GGCC 5 cut(s) 380, 405, 821, 901, 1918
ApaI GGGCCC 1 cut(s) 825
ApeKI GCWGC 8 cut(s) 345, 548, 647, 737, 1546, 1703, 2000, 2030
ApoI RAATTY 3 cut(s) 98, 1391, 1908
AsiGI ACCGGT 2 cut(s) 1520, 1751
Asp718I GGTACC 4 cut(s) 298, 1180, 1455, 1666
AspLEI GCGC 2 cut(s) 920, 1003
AspS9I GGNCC 9 cut(s) 380, 821, 822, 931, 1399, 1749, 1774, 1798, 1918
AsuNHI GCTAGC 1 cut(s) 2026
AvaI CYCGRG 3 cut(s) 500, 874, 1876
AvaII GGWCC 5 cut(s) 931, 1399, 1749, 1774, 1798
BaeGI GKGCMC 3 cut(s) 252, 825, 1966
BamHI GGATCC 1 cut(s) 1474
BanI GGYRCC 8 cut(s) 298, 1180, 1455, 1523, 1539, 1578, 1666, 1963
BanII GRGCYC 3 cut(s) 825, 1149, 1590
BarI GAAGNNNNNNTAC 2 cut(s) 1941, 1973
Bbv12I GWGCWC 1 cut(s) 1826
BbvI GCAGC 7 cut(s) 357, 535, 634, 724, 1558, 1715, 2012
BccI CCATC 2 cut(s) 608, 727
BceAI ACGGC 2 cut(s) 587, 888
BciT130I CCWGG 6 cut(s) 1259, 1292, 1397, 1728, 1740, 2021
BclI TGATCA 1 cut(s) 6
BcoDI GTCTC 3 cut(s) 527, 587, 1930
BfaI CTAG 5 cut(s) 599, 921, 1340, 1859, 2027
BfmI CTRYAG 1 cut(s) 1482
BfoI RGCGCY 1 cut(s) 921
BfrI CTTAAG 1 cut(s) 757
BfuAI ACCTGC 1 cut(s) 1607
BglI GCCNNNNNGGC 1 cut(s) 571
BisI GCNGC 9 cut(s) 346, 383, 549, 648, 738, 1547, 1704, 2001, 2031
BlpI GCTNAGC 1 cut(s) 1996
BlsI GCNGC 9 cut(s) 347, 384, 550, 649, 739, 1548, 1705, 2002, 2032
Bme18I GGWCC 5 cut(s) 931, 1399, 1749, 1774, 1798
BmeT110I CYCGRG 3 cut(s) 500, 874, 1876
BmgT120I GGNCC 9 cut(s) 380, 821, 822, 931, 1399, 1749, 1774, 1798, 1918
BmrI ACTGGG 2 cut(s) 388, 1508
BmsI GCATC 7 cut(s) 514, 865, 1383, 1440, 1719, 1843, 1871
BmtI GCTAGC 1 cut(s) 2030
BmuI ACTGGG 2 cut(s) 388, 1508
BplI GAGNNNNNCTC 2 cut(s) 676, 708
BpmI CTGGAG 2 cut(s) 406, 1710
Bpu1102I GCTNAGC 1 cut(s) 1996
BpuEI CTTGAG 2 cut(s) 982, 1209
BsaAI YACGTR 4 cut(s) 188, 242, 1254, 1315
BsaBI GATNNNNATC 2 cut(s) 1619, 1643
BsaHI GRCGYC 1 cut(s) 375
BsaJI CCNNGG 6 cut(s) 888, 1036, 1142, 1258, 1470, 1876
BsaWI WCCGGW 4 cut(s) 106, 859, 1520, 1751
Bsc4I CCNNNNNNNGG 7 cut(s) 462, 832, 941, 1358, 1520, 1564, 1663
Bse118I RCCGGY 2 cut(s) 1520, 1751
Bse1I ACTGG 3 cut(s) 394, 1432, 1514
Bse3DI GCAATG 1 cut(s) 882
Bse8I GATNNNNATC 2 cut(s) 1619, 1643
BseBI CCWGG 6 cut(s) 1259, 1292, 1397, 1728, 1740, 2021
BseDI CCNNGG 6 cut(s) 888, 1036, 1142, 1258, 1470, 1876
BseGI GGATG 5 cut(s) 365, 856, 1191, 1718, 1886
BseJI GATNNNNATC 2 cut(s) 1619, 1643
BseLI CCNNNNNNNGG 7 cut(s) 462, 832, 941, 1358, 1520, 1564, 1663
BseMI GCAATG 1 cut(s) 882
BseMII CTCAG 3 cut(s) 714, 1164, 2010
BseNI ACTGG 3 cut(s) 394, 1432, 1514
BseRI GAGGAG 2 cut(s) 1053, 1317
BseSI GKGCMC 3 cut(s) 252, 825, 1966
BseX3I CGGCCG 1 cut(s) 901
BseXI GCAGC 7 cut(s) 357, 535, 634, 724, 1558, 1715, 2012
BseYI CCCAGC 2 cut(s) 1589, 1991
Bsh1236I CGCG 3 cut(s) 828, 1001, 1404
Bsh1285I CGRYCG 1 cut(s) 904
BshFI GGCC 5 cut(s) 382, 407, 823, 903, 1920
BshNI GGYRCC 8 cut(s) 298, 1180, 1455, 1523, 1539, 1578, 1666, 1963
BshTI ACCGGT 2 cut(s) 1520, 1751
BsiEI CGRYCG 1 cut(s) 904
BsiHKAI GWGCWC 1 cut(s) 1826
BsiHKCI CYCGRG 3 cut(s) 500, 874, 1876
BsiWI CGTACG 1 cut(s) 1315
BslFI GGGAC 2 cut(s) 917, 1811
BslI CCNNNNNNNGG 7 cut(s) 462, 832, 941, 1358, 1520, 1564, 1663
BsmAI GTCTC 3 cut(s) 527, 587, 1930
BsmFI GGGAC 2 cut(s) 917, 1811
BsnI GGCC 5 cut(s) 382, 407, 823, 903, 1920
BsoBI CYCGRG 3 cut(s) 500, 874, 1876
Bsp120I GGGCCC 1 cut(s) 821
Bsp1286I GDGCHC 6 cut(s) 252, 825, 1149, 1590, 1826, 1966
Bsp1407I TGTACA 1 cut(s) 767
Bsp143I GATC 7 cut(s) 6, 88, 327, 450, 1297, 1474, 1509
Bsp1720I GCTNAGC 1 cut(s) 1996
Bsp19I CCATGG 1 cut(s) 888
BspANI GGCC 5 cut(s) 382, 407, 823, 903, 1920
BspCNI CTCAG 3 cut(s) 715, 1163, 2009
BspFNI CGCG 3 cut(s) 828, 1001, 1404
BspMI ACCTGC 1 cut(s) 1607
BspOI GCTAGC 1 cut(s) 2030
BspPI GGATC 4 cut(s) 1292, 1469, 1482, 1504
BspT107I GGYRCC 8 cut(s) 298, 1180, 1455, 1523, 1539, 1578, 1666, 1963
BspTI CTTAAG 1 cut(s) 757
BsrBI CCGCTC 2 cut(s) 1223, 1660
BsrDI GCAATG 1 cut(s) 882
BsrFI RCCGGY 2 cut(s) 1520, 1751
BsrGI TGTACA 1 cut(s) 767
BsrI ACTGG 3 cut(s) 394, 1432, 1514
BssAI RCCGGY 2 cut(s) 1520, 1751
BssECI CCNNGG 6 cut(s) 888, 1036, 1142, 1258, 1470, 1876
BssMI GATC 7 cut(s) 6, 88, 327, 450, 1297, 1474, 1509
BssNI GRCGYC 1 cut(s) 375
BssT1I CCWWGG 1 cut(s) 888
Bst2UI CCWGG 6 cut(s) 1259, 1292, 1397, 1728, 1740, 2021
Bst4CI ACNGT 2 cut(s) 233, 538
Bst6I CTCTTC 3 cut(s) 585, 1141, 1193
BstACI GRCGYC 1 cut(s) 375
BstAFI CTTAAG 1 cut(s) 757
BstAUI TGTACA 1 cut(s) 767
BstBAI YACGTR 4 cut(s) 188, 242, 1254, 1315
BstC8I GCNNGC 4 cut(s) 546, 1406, 1708, 2028
BstDEI CTNAG 4 cut(s) 723, 936, 1150, 1996
BstDSI CCRYGG 1 cut(s) 888
BstF5I GGATG 5 cut(s) 365, 856, 1191, 1718, 1886
BstFNI CGCG 3 cut(s) 828, 1001, 1404
BstH2I RGCGCY 1 cut(s) 921
BstHHI GCGC 2 cut(s) 920, 1003
BstKTI GATC 7 cut(s) 9, 91, 330, 453, 1300, 1477, 1512
BstMAI GTCTC 3 cut(s) 527, 587, 1930
BstMBI GATC 7 cut(s) 6, 88, 327, 450, 1297, 1474, 1509
BstMCI CGRYCG 1 cut(s) 904
BstMWI GCNNNNNNNGC 7 cut(s) 571, 1272, 1546, 1585, 1599, 1850, 1881
BstNI CCWGG 6 cut(s) 1259, 1292, 1397, 1728, 1740, 2021
BstNSI RCATGY 3 cut(s) 462, 856, 1090
BstSFI CTRYAG 1 cut(s) 1482
BstSLI GKGCMC 3 cut(s) 252, 825, 1966
BstSNI TACGTA 1 cut(s) 1254
BstUI CGCG 3 cut(s) 828, 1001, 1404
BstV1I GCAGC 7 cut(s) 357, 535, 634, 724, 1558, 1715, 2012
BstX2I RGATCY 1 cut(s) 1474
BstYI RGATCY 1 cut(s) 1474
BstZI CGGCCG 1 cut(s) 901
BsuRI GGCC 5 cut(s) 382, 407, 823, 903, 1920
BtgI CCRYGG 1 cut(s) 888
BtsCI GGATG 5 cut(s) 365, 856, 1191, 1718, 1886
BtsI GCAGTG 1 cut(s) 1196
BtsIMutI CAGTG 2 cut(s) 1196, 1425
BveI ACCTGC 1 cut(s) 1607
Cac8I GCNNGC 4 cut(s) 546, 1406, 1708, 2028
CaiI CAGNNNCTG 1 cut(s) 295
CfoI GCGC 2 cut(s) 920, 1003
Cfr10I RCCGGY 2 cut(s) 1520, 1751
Cfr13I GGNCC 9 cut(s) 380, 821, 822, 931, 1399, 1749, 1774, 1798, 1918
Cfr9I CCCGGG 1 cut(s) 1876
CseI GACGC 1 cut(s) 383
CspAI ACCGGT 2 cut(s) 1520, 1751
DdeI CTNAG 4 cut(s) 723, 936, 1150, 1996
DpnI GATC 7 cut(s) 8, 90, 329, 452, 1299, 1476, 1511
DpnII GATC 7 cut(s) 6, 88, 327, 450, 1297, 1474, 1509
EaeI YGGCCR 2 cut(s) 405, 901
EagI CGGCCG 1 cut(s) 901
Eam1104I CTCTTC 3 cut(s) 585, 1141, 1193
EarI CTCTTC 3 cut(s) 585, 1141, 1193
EclXI CGGCCG 1 cut(s) 901
Eco105I TACGTA 1 cut(s) 1254
Eco130I CCWWGG 1 cut(s) 888
Eco24I GRGCYC 3 cut(s) 825, 1149, 1590
Eco47I GGWCC 5 cut(s) 931, 1399, 1749, 1774, 1798
Eco52I CGGCCG 1 cut(s) 901
Eco57I CTGAAG 1 cut(s) 462
Eco88I CYCGRG 3 cut(s) 500, 874, 1876
EcoO109I RGGNCCY 3 cut(s) 822, 931, 1798
EcoRI GAATTC 1 cut(s) 1391
EcoRII CCWGG 6 cut(s) 1257, 1290, 1395, 1726, 1738, 2019
EcoT14I CCWWGG 1 cut(s) 888
EcoT22I ATGCAT 2 cut(s) 858, 1092
EcoT38I GRGCYC 3 cut(s) 825, 1149, 1590
ErhI CCWWGG 1 cut(s) 888
FalI AAGNNNNNCTT 6 cut(s) 264, 296, 740, 772, 1225, 1257
FaqI GGGAC 2 cut(s) 917, 1811
FauI CCCGC 8 cut(s) 833, 850, 1073, 1154, 1228, 1356, 1665, 1743
FbaI TGATCA 1 cut(s) 6
FblI GTMKAC 2 cut(s) 864, 1238
Fnu4HI GCNGC 9 cut(s) 346, 383, 549, 648, 738, 1547, 1704, 2001, 2031
FokI GGATG 5 cut(s) 352, 843, 1178, 1705, 1893
FriOI GRGCYC 3 cut(s) 825, 1149, 1590
Fsp4HI GCNGC 9 cut(s) 346, 383, 549, 648, 738, 1547, 1704, 2001, 2031
FspBI CTAG 5 cut(s) 599, 921, 1340, 1859, 2027
GlaI GCGC 2 cut(s) 919, 1002
GluI GCNGC 9 cut(s) 346, 383, 549, 648, 738, 1547, 1704, 2001, 2031
GsaI CCCAGC 2 cut(s) 1593, 1995
GsuI CTGGAG 2 cut(s) 406, 1710
HaeII RGCGCY 1 cut(s) 921
HaeIII GGCC 5 cut(s) 382, 407, 823, 903, 1920
HgaI GACGC 1 cut(s) 383
HhaI GCGC 2 cut(s) 920, 1003
Hin1I GRCGYC 1 cut(s) 375
Hin6I GCGC 2 cut(s) 918, 1001
HinP1I GCGC 2 cut(s) 918, 1001
HincII GTYRAC 1 cut(s) 51
HindII GTYRAC 1 cut(s) 51
HpaI GTTAAC 1 cut(s) 51
Hpy166II GTNNAC 4 cut(s) 51, 865, 1239, 1774
Hpy188I TCNGA 6 cut(s) 370, 469, 957, 1037, 1693, 1821
Hpy8I GTNNAC 4 cut(s) 51, 865, 1239, 1774
Hpy99I CGWCG 2 cut(s) 374, 377
HpyAV CCTTC 6 cut(s) 290, 437, 1028, 1311, 1447, 1887
HpyCH4III ACNGT 2 cut(s) 233, 538
HpyCH4IV ACGT 5 cut(s) 146, 187, 241, 1253, 1314
HpyCH4V TGCA 9 cut(s) 20, 415, 551, 740, 856, 1090, 1206, 1602, 1710
HpyF10VI GCNNNNNNNGC 7 cut(s) 571, 1272, 1546, 1585, 1599, 1850, 1881
HpyF3I CTNAG 4 cut(s) 723, 936, 1150, 1996
HpySE526I ACGT 5 cut(s) 146, 187, 241, 1253, 1314
Hsp92I GRCGYC 1 cut(s) 375
HspAI GCGC 2 cut(s) 918, 1001
KflI GGGWCCC 2 cut(s) 931, 1798
KpnI GGTACC 4 cut(s) 302, 1184, 1459, 1670
Ksp22I TGATCA 1 cut(s) 6
KspAI GTTAAC 1 cut(s) 51
Kzo9I GATC 7 cut(s) 6, 88, 327, 450, 1297, 1474, 1509
LmnI GCTCC 3 cut(s) 1040, 1742, 2023
Lsp1109I GCAGC 7 cut(s) 357, 535, 634, 724, 1558, 1715, 2012
LweI GCATC 7 cut(s) 514, 865, 1383, 1440, 1719, 1843, 1871
MaeI CTAG 5 cut(s) 599, 921, 1340, 1859, 2027
MaeII ACGT 5 cut(s) 146, 187, 241, 1253, 1314
MaeIII GTNAC 5 cut(s) 237, 1310, 1516, 1568, 1900
MalI GATC 7 cut(s) 8, 90, 329, 452, 1299, 1476, 1511
MbiI CCGCTC 2 cut(s) 1223, 1660
MboI GATC 7 cut(s) 6, 88, 327, 450, 1297, 1474, 1509
MboII GAAGA 8 cut(s) 275, 602, 757, 1128, 1180, 1958, 1961, 1964
MfeI CAATTG 1 cut(s) 136
MflI RGATCY 1 cut(s) 1474
MhlI GDGCHC 6 cut(s) 252, 825, 1149, 1590, 1826, 1966
MlyI GAGTC 6 cut(s) 438, 589, 1083, 1164, 1318, 1725
MmeI TCCRAC 2 cut(s) 393, 980
Mph1103I ATGCAT 2 cut(s) 858, 1092
MseI TTAA 3 cut(s) 50, 758, 1113
MslI CAYNNNNRTG 3 cut(s) 887, 1201, 1379
MspA1I CMGCKG 6 cut(s) 170, 385, 426, 548, 1080, 1161
MspCI CTTAAG 1 cut(s) 757
MunI CAATTG 1 cut(s) 136
MvaI CCWGG 6 cut(s) 1259, 1292, 1397, 1728, 1740, 2021
MvnI CGCG 3 cut(s) 828, 1001, 1404
MwoI GCNNNNNNNGC 7 cut(s) 571, 1272, 1546, 1585, 1599, 1850, 1881
NcoI CCATGG 1 cut(s) 888
NdeII GATC 7 cut(s) 6, 88, 327, 450, 1297, 1474, 1509
NheI GCTAGC 1 cut(s) 2026
NmeAIII GCCGAG 1 cut(s) 1660
NmuCI GTSAC 4 cut(s) 237, 1310, 1516, 1568
NsiI ATGCAT 2 cut(s) 858, 1092
NspI RCATGY 3 cut(s) 462, 856, 1090
PaqCI CACCTGC 1 cut(s) 1607
PciI ACATGT 1 cut(s) 458
PfeI GAWTC 4 cut(s) 353, 496, 1229, 1688
Pfl23II CGTACG 1 cut(s) 1315
PfoI TCCNGGA 3 cut(s) 1395, 1610, 1726
PinAI ACCGGT 2 cut(s) 1520, 1751
PkrI GCNGC 9 cut(s) 347, 384, 550, 649, 739, 1548, 1705, 2002, 2032
PleI GAGTC 6 cut(s) 437, 589, 1082, 1163, 1317, 1725
PpsI GAGTC 6 cut(s) 437, 589, 1082, 1163, 1317, 1725
Ppu21I YACGTR 4 cut(s) 188, 242, 1254, 1315
PpuMI RGGWCCY 2 cut(s) 931, 1798
PscI ACATGT 1 cut(s) 458
Psp1406I AACGTT 1 cut(s) 146
Psp5II RGGWCCY 2 cut(s) 931, 1798
Psp6I CCWGG 6 cut(s) 1257, 1290, 1395, 1726, 1738, 2019
PspFI CCCAGC 2 cut(s) 1589, 1991
PspGI CCWGG 6 cut(s) 1257, 1290, 1395, 1726, 1738, 2019
PspLI CGTACG 1 cut(s) 1315
PspOMI GGGCCC 1 cut(s) 821
PspPI GGNCC 9 cut(s) 380, 821, 822, 931, 1399, 1749, 1774, 1798, 1918
PspPPI RGGWCCY 2 cut(s) 931, 1798
PstNI CAGNNNCTG 1 cut(s) 295
PsuI RGATCY 1 cut(s) 1474
PvuII CAGCTG 2 cut(s) 170, 548
RseI CAYNNNNRTG 3 cut(s) 887, 1201, 1379
SaqAI TTAA 3 cut(s) 50, 758, 1113
SatI GCNGC 9 cut(s) 346, 383, 549, 648, 738, 1547, 1704, 2001, 2031
Sau3AI GATC 7 cut(s) 6, 88, 327, 450, 1297, 1474, 1509
Sau96I GGNCC 9 cut(s) 380, 821, 822, 931, 1399, 1749, 1774, 1798, 1918
SchI GAGTC 6 cut(s) 438, 589, 1083, 1164, 1318, 1725
SduI GDGCHC 6 cut(s) 252, 825, 1149, 1590, 1826, 1966
SfaNI GCATC 7 cut(s) 514, 865, 1383, 1440, 1719, 1843, 1871
SfcI CTRYAG 1 cut(s) 1482
SgrAI CRCCGGYG 1 cut(s) 1520
SinI GGWCC 5 cut(s) 931, 1399, 1749, 1774, 1798
SmaI CCCGGG 1 cut(s) 1878
SmiMI CAYNNNNRTG 3 cut(s) 887, 1201, 1379
SmlI CTYRAG 3 cut(s) 757, 961, 1224
SmoI CTYRAG 3 cut(s) 757, 961, 1224
SnaBI TACGTA 1 cut(s) 1254
SspMI CTAG 5 cut(s) 599, 921, 1340, 1859, 2027
StyI CCWWGG 1 cut(s) 888
TaaI ACNGT 2 cut(s) 233, 538
TaiI ACGT 5 cut(s) 149, 190, 244, 1256, 1317
TaqI TCGA 6 cut(s) 39, 286, 351, 694, 1389, 1891
TaqII GACCGA 1 cut(s) 882
TatI WGTACW 1 cut(s) 767
TauI GCSGC 1 cut(s) 385
TfiI GAWTC 4 cut(s) 353, 496, 1229, 1688
Tru1I TTAA 3 cut(s) 50, 758, 1113
Tru9I TTAA 3 cut(s) 50, 758, 1113
TscAI CASTG 2 cut(s) 1203, 1432
TseFI GTSAC 4 cut(s) 237, 1310, 1516, 1568
TseI GCWGC 8 cut(s) 345, 548, 647, 737, 1546, 1703, 2000, 2030
Tsp45I GTSAC 4 cut(s) 237, 1310, 1516, 1568
TspDTI ATGAA 5 cut(s) 92, 96, 218, 678, 1180
TspGWI ACGGA 1 cut(s) 1333
TspMI CCCGGG 1 cut(s) 1876
TspRI CASTG 2 cut(s) 1203, 1432
Vha464I CTTAAG 1 cut(s) 757
VpaK11BI GGWCC 5 cut(s) 931, 1399, 1749, 1774, 1798
XapI RAATTY 3 cut(s) 98, 1391, 1908
XbaI TCTAGA 2 cut(s) 598, 1858
XceI RCATGY 3 cut(s) 462, 856, 1090
XcmI CCANNNNNNNNNTGG 1 cut(s) 1980
XmaI CCCGGG 1 cut(s) 1876
XmiI GTMKAC 2 cut(s) 864, 1238
XspI CTAG 5 cut(s) 599, 921, 1340, 1859, 2027
Zsp2I ATGCAT 2 cut(s) 858, 1092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.