Rmu_sc0002079.1_g000011

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002079.1
N/A
Physical Location & Seq
Forward (+)
74149 .. 74457
309 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 309 bp
atgggaagggaaacactttcccaaatgaagggaaaaagtggaggaaatccattccctcccccaccctccggattcactttcccatgggaaaggaaattgattcctttcctttcccaccaaccaaacaaagccaaatggagtagtatagacctgaggggaagccactttcagcttattccatttgggtcgggtcgcagactttgccctggaattcaattggggctagttgtggtcaagctagtattggcacaacttctgcattgtttcgattgggaatttccagatggtttgttaccgagttggacttga

Protein Analysis

102

Amino Acids

11.43

Weight (kDa)

9.78

Isoelectric Point (pI)

43.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 52 - 95 7.1e-10 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 68
AcsI RAATTY 2 cut(s) 210, 275
AfiI CCNNNNNNNGG 2 cut(s) 28, 68
AgsI TTSAA 1 cut(s) 215
AjnI CCWGG 1 cut(s) 205
AluBI AGCT 2 cut(s) 172, 238
AluI AGCT 2 cut(s) 172, 238
Aor13HI TCCGGA 1 cut(s) 68
ApoI RAATTY 2 cut(s) 210, 275
AxyI CCTNAGG 1 cut(s) 152
BccI CCATC 1 cut(s) 278
BciT130I CCWGG 1 cut(s) 207
BfaI CTAG 2 cut(s) 224, 239
Bme1390I CCNGG 1 cut(s) 207
BmrFI CCNGG 1 cut(s) 207
BsaJI CCNNGG 2 cut(s) 83, 205
BsaWI WCCGGW 1 cut(s) 68
Bsc4I CCNNNNNNNGG 2 cut(s) 28, 68
Bse21I CCTNAGG 1 cut(s) 152
BseAI TCCGGA 1 cut(s) 68
BseBI CCWGG 1 cut(s) 207
BseDI CCNNGG 2 cut(s) 83, 205
BseLI CCNNNNNNNGG 2 cut(s) 28, 68
BseMII CTCAG 1 cut(s) 143
BsiSI CCGG 1 cut(s) 69
BslI CCNNNNNNNGG 2 cut(s) 28, 68
Bsp13I TCCGGA 1 cut(s) 68
Bsp19I CCATGG 1 cut(s) 83
BspCNI CTCAG 1 cut(s) 144
BspEI TCCGGA 1 cut(s) 68
BssECI CCNNGG 2 cut(s) 83, 205
BssT1I CCWWGG 1 cut(s) 83
Bst2UI CCWGG 1 cut(s) 207
BstAPI GCANNNNNTGC 1 cut(s) 201
BstDEI CTNAG 1 cut(s) 152
BstDSI CCRYGG 1 cut(s) 83
BstMWI GCNNNNNNNGC 1 cut(s) 201
BstNI CCWGG 1 cut(s) 207
BstSCI CCNGG 1 cut(s) 205
Bsu36I CCTNAGG 1 cut(s) 152
BtgI CCRYGG 1 cut(s) 83
CviAII CATG 1 cut(s) 84
CviJI RGCY 5 cut(s) 131, 162, 172, 223, 238
CviKI_1 RGCY 5 cut(s) 131, 162, 172, 223, 238
DdeI CTNAG 1 cut(s) 152
Eco130I CCWWGG 1 cut(s) 83
Eco81I CCTNAGG 1 cut(s) 152
EcoRI GAATTC 1 cut(s) 210
EcoRII CCWGG 1 cut(s) 205
EcoT14I CCWWGG 1 cut(s) 83
ErhI CCWWGG 1 cut(s) 83
FaeI CATG 1 cut(s) 87
FaiI YATR 2 cut(s) 85, 146
FatI CATG 1 cut(s) 83
FspBI CTAG 2 cut(s) 224, 239
HapII CCGG 1 cut(s) 69
Hin1II CATG 1 cut(s) 87
HinfI GANTC 2 cut(s) 72, 100
HpaII CCGG 1 cut(s) 69
Hpy188III TCNNGA 2 cut(s) 69, 281
HpyAV CCTTC 1 cut(s) 22
HpyCH4V TGCA 1 cut(s) 259
HpyF10VI GCNNNNNNNGC 1 cut(s) 201
HpyF3I CTNAG 1 cut(s) 152
Hsp92II CATG 1 cut(s) 87
Kpn2I TCCGGA 1 cut(s) 68
LpnPI CCDG 5 cut(s) 82, 164, 192, 219, 294
MaeI CTAG 2 cut(s) 224, 239
MaeIII GTNAC 1 cut(s) 291
MfeI CAATTG 1 cut(s) 215
MluCI AATT 4 cut(s) 95, 210, 215, 275
MmeI TCCRAC 1 cut(s) 281
MnlI CCTC 4 cut(s) 35, 66, 76, 147
MroI TCCGGA 1 cut(s) 68
MspI CCGG 1 cut(s) 69
MspR9I CCNGG 1 cut(s) 207
MunI CAATTG 1 cut(s) 215
MvaI CCWGG 1 cut(s) 207
MwoI GCNNNNNNNGC 1 cut(s) 201
NcoI CCATGG 1 cut(s) 83
NlaIII CATG 1 cut(s) 87
PfeI GAWTC 2 cut(s) 72, 100
Psp6I CCWGG 1 cut(s) 205
PspGI CCWGG 1 cut(s) 205
ScrFI CCNGG 1 cut(s) 207
SetI ASST 3 cut(s) 153, 174, 240
Sse9I AATT 4 cut(s) 95, 210, 215, 275
SspMI CTAG 2 cut(s) 224, 239
StyD4I CCNGG 1 cut(s) 205
StyI CCWWGG 1 cut(s) 83
TaqI TCGA 1 cut(s) 267
TasI AATT 4 cut(s) 95, 210, 215, 275
TfiI GAWTC 2 cut(s) 72, 100
TspDTI ATGAA 1 cut(s) 41
XapI RAATTY 2 cut(s) 210, 275
XspI CTAG 2 cut(s) 224, 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.