Rmu_sc0002224.1_g000001

Catalyzes the phosphorylation of pantothenate the first step in CoA biosynthesis. May play a role in the physiological regulation of the intracellular CoA concentration

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002224.1
N/A
Physical Location & Seq
Forward (+)
5710 .. 6204
495 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 237 bp
atgcaggtcagctctaagctagctgctgctgcaaaagaggctgatttgattatcttggaaggtatgggcagagctcttcataccaacttcaatggcaggtttaagtgtgatgctttaaagcttgcaatggtgaagcatcataggatggcagatatattgattaaaagaaaacatatacgaatgtggttgcagacacgaaccggcaagttaaaagctccggttcataaaaagttgtag

Protein Analysis

78

Amino Acids

8.89

Weight (kDa)

10.84

Isoelectric Point (pI)

21.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARMT1-like_dom PF01937 3 - 53 3.3e-06 Damage-control phosphatase ARMT1-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 87
AgsI TTSAA 1 cut(s) 91
AluBI AGCT 6 cut(s) 12, 19, 23, 74, 121, 215
AluI AGCT 6 cut(s) 12, 19, 23, 74, 121, 215
Alw21I GWGCWC 1 cut(s) 76
ApeKI GCWGC 3 cut(s) 23, 26, 29
AsuHPI GGTGA 1 cut(s) 142
AsuNHI GCTAGC 1 cut(s) 19
BanII GRGCYC 1 cut(s) 76
Bbv12I GWGCWC 1 cut(s) 76
BbvI GCAGC 3 cut(s) 10, 13, 16
BccI CCATC 1 cut(s) 139
BfaI CTAG 1 cut(s) 20
BfuAI ACCTGC 1 cut(s) 87
BisI GCNGC 3 cut(s) 24, 27, 30
BlsI GCNGC 3 cut(s) 25, 28, 31
BmsI GCATC 2 cut(s) 100, 145
BmtI GCTAGC 1 cut(s) 23
BsaWI WCCGGW 1 cut(s) 217
Bse118I RCCGGY 1 cut(s) 200
Bse3DI GCAATG 1 cut(s) 132
BseGI GGATG 1 cut(s) 150
BseMI GCAATG 1 cut(s) 132
BseXI GCAGC 3 cut(s) 10, 13, 16
BsiHKAI GWGCWC 1 cut(s) 76
BsiSI CCGG 2 cut(s) 201, 218
Bsp1286I GDGCHC 1 cut(s) 76
BspMI ACCTGC 1 cut(s) 87
BspOI GCTAGC 1 cut(s) 23
BspQI GCTCTTC 1 cut(s) 81
BsrDI GCAATG 1 cut(s) 132
BsrFI RCCGGY 1 cut(s) 200
BssAI RCCGGY 1 cut(s) 200
Bst6I CTCTTC 1 cut(s) 81
BstC8I GCNNGC 2 cut(s) 21, 123
BstDEI CTNAG 1 cut(s) 15
BstF5I GGATG 1 cut(s) 150
BstMWI GCNNNNNNNGC 2 cut(s) 29, 38
BstV1I GCAGC 3 cut(s) 10, 13, 16
BtsCI GGATG 1 cut(s) 150
BveI ACCTGC 1 cut(s) 87
Cac8I GCNNGC 2 cut(s) 21, 123
Cfr10I RCCGGY 1 cut(s) 200
CviJI RGCY 7 cut(s) 12, 19, 23, 41, 74, 121, 215
CviKI_1 RGCY 7 cut(s) 12, 19, 23, 41, 74, 121, 215
DdeI CTNAG 1 cut(s) 15
DraI TTTAAA 1 cut(s) 117
Eam1104I CTCTTC 1 cut(s) 81
EarI CTCTTC 1 cut(s) 81
Ecl136II GAGCTC 1 cut(s) 74
Eco24I GRGCYC 1 cut(s) 76
Eco53kI GAGCTC 1 cut(s) 74
EcoICRI GAGCTC 1 cut(s) 74
EcoT38I GRGCYC 1 cut(s) 76
FaiI YATR 7 cut(s) 65, 81, 141, 155, 174, 176, 225
Fnu4HI GCNGC 3 cut(s) 24, 27, 30
FokI GGATG 1 cut(s) 157
FriOI GRGCYC 1 cut(s) 76
Fsp4HI GCNGC 3 cut(s) 24, 27, 30
FspBI CTAG 1 cut(s) 20
GluI GCNGC 3 cut(s) 24, 27, 30
HapII CCGG 2 cut(s) 201, 218
HindIII AAGCTT 1 cut(s) 119
HpaII CCGG 2 cut(s) 201, 218
HphI GGTGA 1 cut(s) 142
HpyAV CCTTC 1 cut(s) 53
HpyCH4V TGCA 4 cut(s) 4, 32, 125, 190
HpyF10VI GCNNNNNNNGC 2 cut(s) 29, 38
HpyF3I CTNAG 1 cut(s) 15
LguI GCTCTTC 1 cut(s) 81
LmnI GCTCC 1 cut(s) 220
LpnPI CCDG 3 cut(s) 82, 214, 231
Lsp1109I GCAGC 3 cut(s) 10, 13, 16
LweI GCATC 2 cut(s) 100, 145
MaeI CTAG 1 cut(s) 20
MboII GAAGA 1 cut(s) 68
MhlI GDGCHC 1 cut(s) 76
MnlI CCTC 1 cut(s) 31
MseI TTAA 4 cut(s) 102, 116, 162, 209
MspI CCGG 2 cut(s) 201, 218
MwoI GCNNNNNNNGC 2 cut(s) 29, 38
NheI GCTAGC 1 cut(s) 19
PciSI GCTCTTC 1 cut(s) 81
PkrI GCNGC 3 cut(s) 25, 28, 31
Psp124BI GAGCTC 1 cut(s) 76
SacI GAGCTC 1 cut(s) 76
SapI GCTCTTC 1 cut(s) 81
SaqAI TTAA 4 cut(s) 102, 116, 162, 209
SatI GCNGC 3 cut(s) 24, 27, 30
SduI GDGCHC 1 cut(s) 76
SetI ASST 9 cut(s) 9, 14, 21, 25, 64, 76, 101, 123, 217
SfaNI GCATC 2 cut(s) 100, 145
SgeI CNNG 9 cut(s) 17, 32, 67, 109, 134, 207, 213, 217, 230
SspMI CTAG 1 cut(s) 20
SstI GAGCTC 1 cut(s) 76
Tru1I TTAA 4 cut(s) 102, 116, 162, 209
Tru9I TTAA 4 cut(s) 102, 116, 162, 209
TseI GCWGC 3 cut(s) 23, 26, 29
TspDTI ATGAA 2 cut(s) 68, 212
XspI CTAG 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.