Rmu_sc0002372.1_g000026

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002372.1
N/A
Physical Location & Seq
Forward (+)
122148 .. 122873
726 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 672 bp
ctgctttctctccatgatgacgtcgtctcagtcccaacaatccactccctcctcctgggctttgctcccttggaggacccagataagctgtcaaagttaacggacgccgctcgccgaccaaacgtcaccgtcaaccgccgtctcatgagcttcctcgacttacgctcctccgccactccctcagctccctacaaaggcgtcaccacctccgacgtcaccgtggaccaaacccgcaacctctggttccgcttcttcgtcccctctacgatgtcgtcttcccccgcctctttacccgtcgtcgttttcttccacggcggcggcctcagcgaaatccccgccgtcgtagtctccgtcaactacctcctctccccggagcacggttacccgtgccagtacgacgatggcctcgacgtcctcaaattcctcgaccaaaaccccgactccctccccgacctcgcttactgctcccgttgcttcctcgccggagacagcgccggcgcgaacattgcccaccacgtggcggtgctagcctgccgcgagccgtttcgggtcgtgaaaccaattgggttgatatcgatccaaccgttcttcggcggcgaggaacggaccgagtctgagatccgactcgagggcgcgccgctggtgtcggtgacccgaactgattggctgtag

Protein Analysis

223

Amino Acids

24.35

Weight (kDa)

5.29

Isoelectric Point (pI)

53.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_3 PF07859 110 - 222 4.9e-22 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 24, 216, 414
AccB7I CCANNNNNTGG 1 cut(s) 517
AccBSI CCGCTC 1 cut(s) 110
AccII CGCG 3 cut(s) 500, 537, 635
AclWI GGATC 2 cut(s) 571, 613
AcsI RAATTY 1 cut(s) 419
AcvI CACGTG 1 cut(s) 517
AcyI GRCGYC 5 cut(s) 21, 105, 198, 213, 411
AdeI CACNNNGTG 1 cut(s) 517
AfaI GTAC 1 cut(s) 395
AfiI CCNNNNNNNGG 8 cut(s) 55, 194, 370, 377, 517, 520, 590, 628
AhdI GACNNNNNGTC 1 cut(s) 122
AjnI CCWGG 1 cut(s) 54
AluBI AGCT 3 cut(s) 88, 150, 185
AluI AGCT 3 cut(s) 88, 150, 185
Alw21I GWGCWC 1 cut(s) 378
Alw26I GTCTC 4 cut(s) 31, 146, 352, 480
AlwI GGATC 2 cut(s) 571, 613
Ama87I CYCGRG 1 cut(s) 626
AoxI GGCC 2 cut(s) 319, 403
ApoI RAATTY 1 cut(s) 419
AscI GGCGCGCC 1 cut(s) 633
AspLEI GCGC 4 cut(s) 494, 500, 635, 637
AspS9I GGNCC 3 cut(s) 76, 223, 606
AsuC2I CCSGG 1 cut(s) 371
AsuHPI GGTGA 4 cut(s) 118, 193, 208, 661
AsuNHI GCTAGC 1 cut(s) 526
AvaI CYCGRG 1 cut(s) 626
AvaII GGWCC 3 cut(s) 76, 223, 606
BbrPI CACGTG 1 cut(s) 517
BbsI GAAGAC 1 cut(s) 267
Bbv12I GWGCWC 1 cut(s) 378
BbvCI CCTCAGC 2 cut(s) 181, 323
BccI CCATC 1 cut(s) 395
BceAI ACGGC 4 cut(s) 123, 323, 328, 526
BciT130I CCWGG 1 cut(s) 56
BcnI CCSGG 1 cut(s) 371
BcoDI GTCTC 4 cut(s) 31, 146, 352, 480
BfaI CTAG 1 cut(s) 527
BfmI CTRYAG 1 cut(s) 668
BfoI RGCGCY 1 cut(s) 495
BisI GCNGC 6 cut(s) 108, 316, 319, 535, 595, 638
BlsI GCNGC 6 cut(s) 109, 317, 320, 536, 596, 639
Bme1390I CCNGG 2 cut(s) 56, 371
Bme18I GGWCC 3 cut(s) 76, 223, 606
BmeRI GACNNNNNGTC 1 cut(s) 122
BmeT110I CYCGRG 1 cut(s) 626
BmgT120I GGNCC 3 cut(s) 76, 223, 606
BmiI GGNNCC 2 cut(s) 78, 245
BmrFI CCNGG 2 cut(s) 56, 371
BmtI GCTAGC 1 cut(s) 530
BpiI GAAGAC 1 cut(s) 267
Bpu10I CCTNAGC 2 cut(s) 181, 323
BpuMI CCSGG 1 cut(s) 371
Bsa29I ATCGAT 1 cut(s) 575
BsaAI YACGTR 1 cut(s) 517
BsaBI GATNNNNATC 1 cut(s) 575
BsaHI GRCGYC 5 cut(s) 21, 105, 198, 213, 411
BsaJI CCNNGG 5 cut(s) 55, 69, 219, 310, 369
BsaXI ACNNNNNCTCC 6 cut(s) 149, 179, 350, 380, 425, 455
Bsc4I CCNNNNNNNGG 8 cut(s) 55, 194, 370, 377, 517, 520, 590, 628
Bse118I RCCGGY 1 cut(s) 494
Bse1I ACTGG 1 cut(s) 391
Bse3DI GCAATG 1 cut(s) 504
Bse8I GATNNNNATC 1 cut(s) 575
BseBI CCWGG 1 cut(s) 56
BseCI ATCGAT 1 cut(s) 575
BseDI CCNNGG 5 cut(s) 55, 69, 219, 310, 369
BseJI GATNNNNATC 1 cut(s) 575
BseLI CCNNNNNNNGG 8 cut(s) 55, 194, 370, 377, 517, 520, 590, 628
BseMI GCAATG 1 cut(s) 504
BseMII CTCAG 4 cut(s) 42, 195, 337, 606
BseNI ACTGG 1 cut(s) 391
BsePI GCGCGC 1 cut(s) 633
BseRI GAGGAG 3 cut(s) 41, 157, 353
Bsh1236I CGCG 3 cut(s) 500, 537, 635
BshFI GGCC 2 cut(s) 321, 405
BshVI ATCGAT 1 cut(s) 575
BsiHKAI GWGCWC 1 cut(s) 378
BsiHKCI CYCGRG 1 cut(s) 626
BsiSI CCGG 3 cut(s) 371, 483, 495
BslFI GGGAC 2 cut(s) 17, 242
BslI CCNNNNNNNGG 8 cut(s) 55, 194, 370, 377, 517, 520, 590, 628
BsmAI GTCTC 4 cut(s) 31, 146, 352, 480
BsmBI CGTCTC 2 cut(s) 31, 146
BsmFI GGGAC 2 cut(s) 17, 242
BsnI GGCC 2 cut(s) 321, 405
BsoBI CYCGRG 1 cut(s) 626
Bsp1286I GDGCHC 1 cut(s) 378
Bsp143I GATC 2 cut(s) 576, 618
BspANI GGCC 2 cut(s) 321, 405
BspCNI CTCAG 4 cut(s) 41, 194, 336, 607
BspDI ATCGAT 1 cut(s) 575
BspFNI CGCG 3 cut(s) 500, 537, 635
BspHI TCATGA 1 cut(s) 144
BspLI GGNNCC 2 cut(s) 78, 245
BspOI GCTAGC 1 cut(s) 530
BspPI GGATC 2 cut(s) 571, 613
BsrBI CCGCTC 1 cut(s) 110
BsrDI GCAATG 1 cut(s) 504
BsrFI RCCGGY 1 cut(s) 494
BsrI ACTGG 1 cut(s) 391
BssAI RCCGGY 1 cut(s) 494
BssECI CCNNGG 5 cut(s) 55, 69, 219, 310, 369
BssHII GCGCGC 1 cut(s) 633
BssMI GATC 2 cut(s) 576, 618
BssNI GRCGYC 5 cut(s) 21, 105, 198, 213, 411
BssT1I CCWWGG 1 cut(s) 69
Bst2UI CCWGG 1 cut(s) 56
Bst4CI ACNGT 4 cut(s) 130, 220, 380, 585
BstACI GRCGYC 5 cut(s) 21, 105, 198, 213, 411
BstBAI YACGTR 1 cut(s) 517
BstC8I GCNNGC 6 cut(s) 112, 496, 528, 532, 539, 635
BstDEI CTNAG 4 cut(s) 28, 181, 323, 615
BstDSI CCRYGG 2 cut(s) 219, 310
BstEII GGTNACC 2 cut(s) 380, 649
BstFNI CGCG 3 cut(s) 500, 537, 635
BstH2I RGCGCY 1 cut(s) 495
BstHHI GCGC 4 cut(s) 494, 500, 635, 637
BstKTI GATC 2 cut(s) 579, 621
BstMAI GTCTC 4 cut(s) 31, 146, 352, 480
BstMBI GATC 2 cut(s) 576, 618
BstMWI GCNNNNNNNGC 4 cut(s) 324, 471, 506, 527
BstNI CCWGG 1 cut(s) 56
BstPI GGTNACC 2 cut(s) 380, 649
BstSCI CCNGG 2 cut(s) 54, 369
BstSFI CTRYAG 1 cut(s) 668
BstUI CGCG 3 cut(s) 500, 537, 635
BstV2I GAAGAC 1 cut(s) 267
BstX2I RGATCY 1 cut(s) 618
BstYI RGATCY 1 cut(s) 618
Bsu15I ATCGAT 1 cut(s) 575
BsuRI GGCC 2 cut(s) 321, 405
BsuTUI ATCGAT 1 cut(s) 575
BtgI CCRYGG 2 cut(s) 219, 310
Cac8I GCNNGC 6 cut(s) 112, 496, 528, 532, 539, 635
CciI TCATGA 1 cut(s) 144
CfoI GCGC 4 cut(s) 494, 500, 635, 637
Cfr10I RCCGGY 1 cut(s) 494
Cfr13I GGNCC 3 cut(s) 76, 223, 606
ClaI ATCGAT 1 cut(s) 575
CpoI CGGWCCG 1 cut(s) 606
CseI GACGC 2 cut(s) 113, 187
Csp6I GTAC 1 cut(s) 394
CspI CGGWCCG 1 cut(s) 606
CviAII CATG 2 cut(s) 14, 145
CviJI RGCY 9 cut(s) 60, 88, 150, 185, 321, 405, 530, 541, 667
CviKI_1 RGCY 9 cut(s) 60, 88, 150, 185, 321, 405, 530, 541, 667
CviQI GTAC 1 cut(s) 394
DdeI CTNAG 4 cut(s) 28, 181, 323, 615
DpnI GATC 2 cut(s) 578, 620
DpnII GATC 2 cut(s) 576, 618
DraIII CACNNNGTG 1 cut(s) 517
DriI GACNNNNNGTC 1 cut(s) 122
Eam1105I GACNNNNNGTC 1 cut(s) 122
EciI GGCGGA 1 cut(s) 160
Eco130I CCWWGG 1 cut(s) 69
Eco32I GATATC 1 cut(s) 573
Eco47I GGWCC 3 cut(s) 76, 223, 606
Eco72I CACGTG 1 cut(s) 517
Eco88I CYCGRG 1 cut(s) 626
Eco91I GGTNACC 2 cut(s) 380, 649
EcoO109I RGGNCCY 1 cut(s) 76
EcoO65I GGTNACC 2 cut(s) 380, 649
EcoRII CCWGG 1 cut(s) 54
EcoRV GATATC 1 cut(s) 573
EcoT14I CCWWGG 1 cut(s) 69
ErhI CCWWGG 1 cut(s) 69
Esp3I CGTCTC 2 cut(s) 31, 146
FaeI CATG 2 cut(s) 17, 148
FaiI YATR 2 cut(s) 15, 146
FaqI GGGAC 2 cut(s) 17, 242
FatI CATG 2 cut(s) 13, 144
FauI CCCGC 3 cut(s) 239, 289, 343
Fnu4HI GCNGC 6 cut(s) 108, 316, 319, 535, 595, 638
Fsp4HI GCNGC 6 cut(s) 108, 316, 319, 535, 595, 638
FspBI CTAG 1 cut(s) 527
GlaI GCGC 4 cut(s) 493, 499, 634, 636
GluI GCNGC 6 cut(s) 108, 316, 319, 535, 595, 638
HaeII RGCGCY 1 cut(s) 495
HaeIII GGCC 2 cut(s) 321, 405
HapII CCGG 3 cut(s) 371, 483, 495
HgaI GACGC 2 cut(s) 113, 187
HhaI GCGC 4 cut(s) 494, 500, 635, 637
Hin1I GRCGYC 5 cut(s) 21, 105, 198, 213, 411
Hin1II CATG 2 cut(s) 17, 148
Hin6I GCGC 4 cut(s) 492, 498, 633, 635
HinP1I GCGC 4 cut(s) 492, 498, 633, 635
HincII GTYRAC 3 cut(s) 99, 133, 355
HindII GTYRAC 3 cut(s) 99, 133, 355
HinfI GANTC 3 cut(s) 440, 611, 624
HpaI GTTAAC 1 cut(s) 99
HpaII CCGG 3 cut(s) 371, 483, 495
HphI GGTGA 4 cut(s) 118, 193, 208, 661
Hpy166II GTNNAC 4 cut(s) 99, 133, 223, 355
Hpy188I TCNGA 3 cut(s) 211, 616, 623
Hpy188III TCNNGA 2 cut(s) 145, 553
Hpy8I GTNNAC 4 cut(s) 99, 133, 223, 355
Hpy99I CGWCG 7 cut(s) 26, 215, 299, 302, 344, 401, 413
HpyCH4III ACNGT 4 cut(s) 130, 220, 380, 585
HpyCH4IV ACGT 5 cut(s) 21, 123, 213, 411, 516
HpyF10VI GCNNNNNNNGC 4 cut(s) 324, 471, 506, 527
HpyF3I CTNAG 4 cut(s) 28, 181, 323, 615
HpySE526I ACGT 5 cut(s) 21, 123, 213, 411, 516
Hsp92I GRCGYC 5 cut(s) 21, 105, 198, 213, 411
Hsp92II CATG 2 cut(s) 17, 148
HspAI GCGC 4 cut(s) 492, 498, 633, 635
KroI GCCGGC 1 cut(s) 494
KroNI GCCGGC 1 cut(s) 496
KspAI GTTAAC 1 cut(s) 99
Kzo9I GATC 2 cut(s) 576, 618
LmnI GCTCC 5 cut(s) 70, 170, 190, 373, 470
MaeI CTAG 1 cut(s) 527
MaeII ACGT 5 cut(s) 21, 123, 213, 411, 516
MaeIII GTNAC 5 cut(s) 124, 199, 214, 380, 649
MalI GATC 2 cut(s) 578, 620
MbiI CCGCTC 1 cut(s) 110
MboI GATC 2 cut(s) 576, 618
MboII GAAGA 4 cut(s) 244, 267, 298, 580
MfeI CAATTG 1 cut(s) 561
MflI RGATCY 1 cut(s) 618
MhlI GDGCHC 1 cut(s) 378
MluCI AATT 2 cut(s) 419, 561
MlyI GAGTC 3 cut(s) 434, 618, 620
MmeI TCCRAC 3 cut(s) 234, 604, 646
MreI CGCCGGCG 1 cut(s) 494
MroNI GCCGGC 1 cut(s) 494
MseI TTAA 1 cut(s) 98
MspA1I CMGCKG 1 cut(s) 640
MspI CCGG 3 cut(s) 371, 483, 495
MspR9I CCNGG 2 cut(s) 56, 371
MunI CAATTG 1 cut(s) 561
MvaI CCWGG 1 cut(s) 56
MvnI CGCG 3 cut(s) 500, 537, 635
MwoI GCNNNNNNNGC 4 cut(s) 324, 471, 506, 527
NaeI GCCGGC 1 cut(s) 496
NciI CCSGG 1 cut(s) 371
NdeII GATC 2 cut(s) 576, 618
NgoMIV GCCGGC 1 cut(s) 494
NheI GCTAGC 1 cut(s) 526
NlaIII CATG 2 cut(s) 17, 148
NlaIV GGNNCC 2 cut(s) 78, 245
NmuCI GTSAC 4 cut(s) 124, 199, 214, 649
PaeR7I CTCGAG 1 cut(s) 626
PagI TCATGA 1 cut(s) 144
PalAI GGCGCGCC 1 cut(s) 633
PauI GCGCGC 1 cut(s) 633
PcsI WCGNNNNNNNCGW 3 cut(s) 348, 405, 581
PdiI GCCGGC 1 cut(s) 496
PflFI GACNNNGTC 2 cut(s) 23, 610
PflMI CCANNNNNTGG 1 cut(s) 517
PkrI GCNGC 6 cut(s) 109, 317, 320, 536, 596, 639
PleI GAGTC 3 cut(s) 434, 618, 619
PmaCI CACGTG 1 cut(s) 517
PmlI CACGTG 1 cut(s) 517
PpsI GAGTC 3 cut(s) 434, 618, 619
Ppu21I YACGTR 1 cut(s) 517
PpuMI RGGWCCY 1 cut(s) 76
Psp5II RGGWCCY 1 cut(s) 76
Psp6I CCWGG 1 cut(s) 54
PspCI CACGTG 1 cut(s) 517
PspEI GGTNACC 2 cut(s) 380, 649
PspGI CCWGG 1 cut(s) 54
PspN4I GGNNCC 2 cut(s) 78, 245
PspPI GGNCC 3 cut(s) 76, 223, 606
PspPPI RGGWCCY 1 cut(s) 76
PspXI VCTCGAGB 1 cut(s) 626
PsuI RGATCY 1 cut(s) 618
PsyI GACNNNGTC 2 cut(s) 23, 610
PteI GCGCGC 1 cut(s) 633
RsaI GTAC 1 cut(s) 395
RsaNI GTAC 1 cut(s) 394
Rsr2I CGGWCCG 1 cut(s) 606
RsrII CGGWCCG 1 cut(s) 606
SaqAI TTAA 1 cut(s) 98
SatI GCNGC 6 cut(s) 108, 316, 319, 535, 595, 638
Sau3AI GATC 2 cut(s) 576, 618
Sau96I GGNCC 3 cut(s) 76, 223, 606
SchI GAGTC 3 cut(s) 434, 618, 620
ScrFI CCNGG 2 cut(s) 56, 371
SduI GDGCHC 1 cut(s) 378
SfcI CTRYAG 1 cut(s) 668
Sfr274I CTCGAG 1 cut(s) 626
SgrAI CRCCGGYG 1 cut(s) 494
SgsI GGCGCGCC 1 cut(s) 633
SinI GGWCC 3 cut(s) 76, 223, 606
SlaI CTCGAG 1 cut(s) 626
SmlI CTYRAG 1 cut(s) 626
SmoI CTYRAG 1 cut(s) 626
Sse9I AATT 2 cut(s) 419, 561
SspMI CTAG 1 cut(s) 527
StyD4I CCNGG 2 cut(s) 54, 369
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 4 cut(s) 130, 220, 380, 585
TaiI ACGT 5 cut(s) 24, 126, 216, 414, 519
TaqI TCGA 5 cut(s) 156, 408, 426, 575, 627
TaqII GACCGA 1 cut(s) 623
TasI AATT 2 cut(s) 419, 561
TauI GCSGC 6 cut(s) 110, 318, 321, 537, 597, 640
Tru1I TTAA 1 cut(s) 98
Tru9I TTAA 1 cut(s) 98
TseFI GTSAC 4 cut(s) 124, 199, 214, 649
Tsp45I GTSAC 4 cut(s) 124, 199, 214, 649
TspGWI ACGGA 3 cut(s) 116, 340, 619
Tth111I GACNNNGTC 2 cut(s) 23, 610
Van91I CCANNNNNTGG 1 cut(s) 517
VpaK11BI GGWCC 3 cut(s) 76, 223, 606
XapI RAATTY 1 cut(s) 419
XcmI CCANNNNNNNNNTGG 1 cut(s) 398
XhoI CTCGAG 1 cut(s) 626
XspI CTAG 1 cut(s) 527
ZraI GACGTC 3 cut(s) 22, 214, 412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.