Rmu_sc0002377.1_g000001

No apical meristem (NAM) protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002377.1
N/A
Physical Location & Seq
Reverse (-)
17742 .. 19095
1354 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002377.1_g000001.1.cds

Sequence Viewer

Length: 342 bp
atgaacaagagtaatatcagaagctctgatctcattgatgccaagcttgaagaacaccagatgtgtggatcgaagcagtgccccggttgtggacacaaacttgaaggaaagccggactggttaggtctaccagcaggagtgaaatttgacccaacagaccaagaactgattgaacaccttgaagcaaaggtagaagccaaagacacaaagtctcaccctttgattgatgagttcattcctaccattgaaggagaagatggcatttgttacacccatcctgaaaaacttcctgttttggacgccttaacgatcatcaaattggctgaaattttgcagaggtga

Protein Analysis

113

Amino Acids

12.57

Weight (kDa)

5.01

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 127
AclWI GGATC 1 cut(s) 76
AcsI RAATTY 2 cut(s) 143, 327
AcyI GRCGYC 1 cut(s) 300
AfiI CCNNNNNNNGG 1 cut(s) 89
AgsI TTSAA 5 cut(s) 50, 104, 173, 182, 248
AhdI GACNNNNNGTC 1 cut(s) 208
AluBI AGCT 2 cut(s) 24, 46
AluI AGCT 2 cut(s) 24, 46
Alw26I GTCTC 1 cut(s) 216
AlwI GGATC 1 cut(s) 76
ApoI RAATTY 2 cut(s) 143, 327
Asp700I GAANNNNTTC 1 cut(s) 285
AsuC2I CCSGG 1 cut(s) 84
AsuHPI GGTGA 1 cut(s) 206
BaeGI GKGCMC 1 cut(s) 83
BccI CCATC 2 cut(s) 251, 282
BcnI CCSGG 1 cut(s) 84
BcoDI GTCTC 1 cut(s) 216
Bme1390I CCNGG 1 cut(s) 84
BmeRI GACNNNNNGTC 1 cut(s) 208
BmrFI CCNGG 1 cut(s) 84
BmsI GCATC 1 cut(s) 28
BpuMI CCSGG 1 cut(s) 84
BsaHI GRCGYC 1 cut(s) 300
BsaJI CCNNGG 1 cut(s) 82
Bsc4I CCNNNNNNNGG 1 cut(s) 89
Bse1I ACTGG 1 cut(s) 122
BseDI CCNNGG 1 cut(s) 82
BseGI GGATG 1 cut(s) 274
BseLI CCNNNNNNNGG 1 cut(s) 89
BseNI ACTGG 1 cut(s) 122
BseSI GKGCMC 1 cut(s) 83
BsiSI CCGG 2 cut(s) 84, 113
BslI CCNNNNNNNGG 1 cut(s) 89
BsmAI GTCTC 1 cut(s) 216
Bsp1286I GDGCHC 1 cut(s) 83
Bsp143I GATC 3 cut(s) 28, 68, 309
BspPI GGATC 1 cut(s) 76
BsrI ACTGG 1 cut(s) 122
BssECI CCNNGG 1 cut(s) 82
BssMI GATC 3 cut(s) 28, 68, 309
BssNI GRCGYC 1 cut(s) 300
BstACI GRCGYC 1 cut(s) 300
BstF5I GGATG 1 cut(s) 274
BstKTI GATC 3 cut(s) 31, 71, 312
BstMAI GTCTC 1 cut(s) 216
BstMBI GATC 3 cut(s) 28, 68, 309
BstSCI CCNGG 1 cut(s) 82
BstSLI GKGCMC 1 cut(s) 83
BstXI CCANNNNNNTGG 1 cut(s) 65
BtsCI GGATG 1 cut(s) 274
BtsI GCAGTG 1 cut(s) 83
BtsIMutI CAGTG 1 cut(s) 83
CseI GACGC 1 cut(s) 308
CviJI RGCY 5 cut(s) 24, 46, 112, 197, 323
CviKI_1 RGCY 5 cut(s) 24, 46, 112, 197, 323
DpnI GATC 3 cut(s) 30, 70, 311
DpnII GATC 3 cut(s) 28, 68, 309
DriI GACNNNNNGTC 1 cut(s) 208
Eam1105I GACNNNNNGTC 1 cut(s) 208
FblI GTMKAC 1 cut(s) 127
FokI GGATG 1 cut(s) 261
HapII CCGG 2 cut(s) 84, 113
HgaI GACGC 1 cut(s) 308
Hin1I GRCGYC 1 cut(s) 300
HindIII AAGCTT 1 cut(s) 44
HpaII CCGG 2 cut(s) 84, 113
HphI GGTGA 1 cut(s) 206
Hpy166II GTNNAC 2 cut(s) 92, 128
Hpy188I TCNGA 2 cut(s) 20, 28
Hpy188III TCNNGA 1 cut(s) 278
Hpy8I GTNNAC 2 cut(s) 92, 128
HpyAV CCTTC 2 cut(s) 98, 242
HpyCH4V TGCA 1 cut(s) 334
Hsp92I GRCGYC 1 cut(s) 300
Kzo9I GATC 3 cut(s) 28, 68, 309
LpnPI CCDG 8 cut(s) 71, 97, 103, 120, 126, 144, 291, 303
LweI GCATC 1 cut(s) 28
MaeIII GTNAC 1 cut(s) 266
MalI GATC 3 cut(s) 30, 70, 311
MboI GATC 3 cut(s) 28, 68, 309
MboII GAAGA 2 cut(s) 62, 266
MhlI GDGCHC 1 cut(s) 83
MluCI AATT 3 cut(s) 143, 317, 327
MnlI CCTC 1 cut(s) 330
MroXI GAANNNNTTC 1 cut(s) 285
MseI TTAA 1 cut(s) 305
MspI CCGG 2 cut(s) 84, 113
MspR9I CCNGG 1 cut(s) 84
NciI CCSGG 1 cut(s) 84
NdeII GATC 3 cut(s) 28, 68, 309
PdmI GAANNNNTTC 1 cut(s) 285
SaqAI TTAA 1 cut(s) 305
Sau3AI GATC 3 cut(s) 28, 68, 309
ScrFI CCNGG 1 cut(s) 84
SduI GDGCHC 1 cut(s) 83
SetI ASST 6 cut(s) 26, 48, 127, 180, 192, 341
SfaNI GCATC 1 cut(s) 28
Sse9I AATT 3 cut(s) 143, 317, 327
StyD4I CCNGG 1 cut(s) 82
TaqI TCGA 1 cut(s) 71
TasI AATT 3 cut(s) 143, 317, 327
Tru1I TTAA 1 cut(s) 305
Tru9I TTAA 1 cut(s) 305
TscAI CASTG 1 cut(s) 83
TspDTI ATGAA 2 cut(s) 17, 223
TspRI CASTG 1 cut(s) 83
XapI RAATTY 2 cut(s) 143, 327
XmiI GTMKAC 1 cut(s) 127
XmnI GAANNNNTTC 1 cut(s) 285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.