Rmu_sc0002384.1_g000001

Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002384.1
N/A
Physical Location & Seq
Forward (+)
1742 .. 2162
421 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 234 bp
atggaagacattgaggagggtgttgaaggttatgatgatgagaggtcccttcttatgtctcaaaagaacttggagaagcgttttggtcaatctccagtttttattgcagccaccttcatggaacaagggggcattccacctacaacaaaccttgcaactcttttgaaggaagccatacatgttataagctgtgggtatgaagacaagaccaaatggggaaaagaggtcagttag

Protein Analysis

77

Amino Acids

8.61

Weight (kDa)

4.61

Isoelectric Point (pI)

62.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulose_synt PF03552 1 - 76 7.3e-25 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 185
AflIII ACRYGT 1 cut(s) 178
AgsI TTSAA 2 cut(s) 26, 166
AluBI AGCT 1 cut(s) 189
AluI AGCT 1 cut(s) 189
Alw26I GTCTC 1 cut(s) 63
ApeKI GCWGC 1 cut(s) 107
AspS9I GGNCC 1 cut(s) 45
AvaII GGWCC 1 cut(s) 45
BbsI GAAGAC 2 cut(s) 12, 207
BbvI GCAGC 1 cut(s) 119
BcoDI GTCTC 1 cut(s) 63
BisI GCNGC 1 cut(s) 108
BlsI GCNGC 1 cut(s) 109
Bme18I GGWCC 1 cut(s) 45
BmgT120I GGNCC 1 cut(s) 45
BmiI GGNNCC 1 cut(s) 47
BpiI GAAGAC 2 cut(s) 12, 207
BpmI CTGGAG 1 cut(s) 78
Bse1I ACTGG 1 cut(s) 95
BseNI ACTGG 1 cut(s) 95
BseRI GAGGAG 1 cut(s) 29
BseXI GCAGC 1 cut(s) 119
BslFI GGGAC 1 cut(s) 31
BsmAI GTCTC 1 cut(s) 63
BsmFI GGGAC 1 cut(s) 31
BsmI GAATGC 1 cut(s) 132
BspLI GGNNCC 1 cut(s) 47
BsrI ACTGG 1 cut(s) 95
BstMAI GTCTC 1 cut(s) 63
BstNSI RCATGY 1 cut(s) 182
BstV1I GCAGC 1 cut(s) 119
BstV2I GAAGAC 2 cut(s) 12, 207
BstXI CCANNNNNNTGG 1 cut(s) 118
Cfr13I GGNCC 1 cut(s) 45
CviAII CATG 2 cut(s) 118, 179
CviJI RGCY 3 cut(s) 110, 173, 189
CviKI_1 RGCY 3 cut(s) 110, 173, 189
Eco47I GGWCC 1 cut(s) 45
EcoO109I RGGNCCY 1 cut(s) 45
FaeI CATG 2 cut(s) 121, 182
FaiI YATR 7 cut(s) 33, 56, 119, 176, 180, 185, 198
FaqI GGGAC 1 cut(s) 31
FatI CATG 2 cut(s) 117, 178
Fnu4HI GCNGC 1 cut(s) 108
Fsp4HI GCNGC 1 cut(s) 108
GluI GCNGC 1 cut(s) 108
GsuI CTGGAG 1 cut(s) 78
Hin1II CATG 2 cut(s) 121, 182
HpyAV CCTTC 4 cut(s) 20, 59, 124, 160
HpyCH4V TGCA 2 cut(s) 107, 155
Hsp92II CATG 2 cut(s) 121, 182
LpnPI CCDG 1 cut(s) 108
Lsp1109I GCAGC 1 cut(s) 119
MboII GAAGA 2 cut(s) 17, 212
MnlI CCTC 4 cut(s) 7, 10, 36, 217
MslI CAYNNNNRTG 1 cut(s) 116
Mva1269I GAATGC 1 cut(s) 132
NlaIII CATG 2 cut(s) 121, 182
NlaIV GGNNCC 1 cut(s) 47
NspI RCATGY 1 cut(s) 182
PciI ACATGT 1 cut(s) 178
PctI GAATGC 1 cut(s) 132
PkrI GCNGC 1 cut(s) 109
PpuMI RGGWCCY 1 cut(s) 45
PscI ACATGT 1 cut(s) 178
PsiI TTATAA 1 cut(s) 185
Psp5II RGGWCCY 1 cut(s) 45
PspN4I GGNNCC 1 cut(s) 47
PspPI GGNCC 1 cut(s) 45
PspPPI RGGWCCY 1 cut(s) 45
RseI CAYNNNNRTG 1 cut(s) 116
SatI GCNGC 1 cut(s) 108
Sau96I GGNCC 1 cut(s) 45
SetI ASST 7 cut(s) 31, 47, 116, 142, 153, 191, 228
SgeI CNNG 7 cut(s) 82, 107, 130, 137, 164, 191, 217
SinI GGWCC 1 cut(s) 45
SmiMI CAYNNNNRTG 1 cut(s) 116
TseI GCWGC 1 cut(s) 107
TspDTI ATGAA 2 cut(s) 106, 213
VpaK11BI GGWCC 1 cut(s) 45
XceI RCATGY 1 cut(s) 182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.