Rmu_sc0002469.1_g000002
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002469.1
N/A
Physical Location & Seq
Forward (+)
11442 .. 12416
975 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002469.1_g000002.1.cds

Sequence Viewer

Length: 975 bp
atggtgctcttgtgcttcctctccttcaagtcccactccgacctcgacaaccgcctcctctacacccttaacgagcccttcgactactgccaatggcaaggcgtcaaatgcgcccagggccgcatcgtccgcttcgtcctccagtccttctccctctgcggcacccttgccccccacaccctctcccgcctcgaccagctccgcgtcctcagcctccacaacaactccttctctggtcccctccccgacctctcctccctctccaacctcaagtccctcttcttgaaccgcaactccttctccggttctttccctccttcactcctcgccctccacctcctccgtgcccttgatctctctcacaacaacttcaccggttcgatcccctctctcctgaccggtctagaccggctcaactccctccacctcgagttcaaccggttcaacggctccttcccggctttgaaccagtccttcctcaccgacgtcaacgtctcctccaacaaccttaccggccccgtcccgggcacccccactctctcccggtttgacagcacctcgttccagctcaaccccggcctctgcggcgagattatgaacaaggcctgcagctcacgctcacccttctttgaatcccacaatgccacctcgccgggatcgtcggagcctttaggggagagtgcacagtcacaaggagcggtggtgctgtctccgccctctccaacaaggcacaagaaaaccggtctggttctcggaatatcaatagcagtcgcatttatgtttgctggtctcttattcgtgtttgcagtgatccgaaaccgaacgtccgggactgaagccgaaattagaccctcgaaaccgtccccaagtgaagacagggatccatatcccgccgccgaggaagagaggtcgagggagagagagagactatgcggccaggagagagggagagagggagggagagagaaaatataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

324

Amino Acids

35.52

Weight (kDa)

8.51

Isoelectric Point (pI)

51.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 491
AatII GACGTC 1 cut(s) 489
AccB1I GGYRCC 2 cut(s) 161, 527
AccBSI CCGCTC 1 cut(s) 698
AccII CGCG 1 cut(s) 204
AclWI GGATC 5 cut(s) 376, 664, 805, 875, 888
AcoI YGGCCR 1 cut(s) 934
AcuI CTGAAG 1 cut(s) 855
AcyI GRCGYC 2 cut(s) 102, 486
AfiI CCNNNNNNNGG 2 cut(s) 523, 524
AgeI ACCGGT 4 cut(s) 374, 398, 438, 740
AgsI TTSAA 6 cut(s) 28, 286, 436, 445, 466, 632
AjnI CCWGG 2 cut(s) 114, 936
AloI GAACNNNNNNTCC 2 cut(s) 278, 310
AluBI AGCT 3 cut(s) 199, 568, 612
AluI AGCT 3 cut(s) 199, 568, 612
Alw21I GWGCWC 2 cut(s) 9, 685
Alw26I GTCTC 4 cut(s) 499, 714, 794, 919
Alw44I GTGCAC 1 cut(s) 681
AlwI GGATC 5 cut(s) 376, 664, 805, 875, 888
Ama87I CYCGRG 2 cut(s) 428, 523
AoxI GGCC 5 cut(s) 118, 514, 577, 603, 934
ApaLI GTGCAC 1 cut(s) 681
ApeKI GCWGC 1 cut(s) 609
AsiGI ACCGGT 4 cut(s) 374, 398, 438, 740
AspLEI GCGC 1 cut(s) 113
AspS9I GGNCC 3 cut(s) 118, 236, 515
AsuC2I CCSGG 7 cut(s) 458, 524, 525, 544, 576, 654, 829
AsuHPI GGTGA 3 cut(s) 364, 472, 612
AvaI CYCGRG 2 cut(s) 428, 523
AvaII GGWCC 1 cut(s) 236
BaeGI GKGCMC 3 cut(s) 349, 530, 685
BamHI GGATCC 1 cut(s) 880
BanI GGYRCC 2 cut(s) 161, 527
BanII GRGCYC 1 cut(s) 78
BbsI GAAGAC 1 cut(s) 879
Bbv12I GWGCWC 2 cut(s) 9, 685
BbvCI CCTCAGC 1 cut(s) 209
BbvI GCAGC 1 cut(s) 621
BceAI ACGGC 1 cut(s) 463
BciT130I CCWGG 2 cut(s) 116, 938
BcnI CCSGG 7 cut(s) 458, 524, 525, 544, 576, 654, 829
BcoDI GTCTC 4 cut(s) 499, 714, 794, 919
BfaI CTAG 1 cut(s) 404
BfmI CTRYAG 1 cut(s) 607
BglI GCCNNNNNGGC 1 cut(s) 585
BisI GCNGC 6 cut(s) 121, 160, 586, 610, 894, 934
BlsI GCNGC 6 cut(s) 122, 161, 587, 611, 895, 935
Bme1390I CCNGG 9 cut(s) 116, 458, 524, 525, 544, 576, 654, 829, 938
Bme18I GGWCC 1 cut(s) 236
BmeT110I CYCGRG 2 cut(s) 428, 523
BmgT120I GGNCC 3 cut(s) 118, 236, 515
BmiI GGNNCC 7 cut(s) 163, 238, 451, 517, 529, 666, 882
BmrFI CCNGG 9 cut(s) 116, 458, 524, 525, 544, 576, 654, 829, 938
BmsI GCATC 1 cut(s) 132
BpiI GAAGAC 1 cut(s) 879
BpmI CTGGAG 1 cut(s) 125
Bpu10I CCTNAGC 1 cut(s) 209
BpuEI CTTGAG 1 cut(s) 254
BpuMI CCSGG 7 cut(s) 458, 524, 525, 544, 576, 654, 829
BsaBI GATNNNNATC 1 cut(s) 885
BsaHI GRCGYC 2 cut(s) 102, 486
BsaI GGTCTC 1 cut(s) 794
BsaJI CCNNGG 5 cut(s) 114, 115, 523, 574, 897
BsaWI WCCGGW 5 cut(s) 302, 374, 398, 438, 740
Bsc4I CCNNNNNNNGG 2 cut(s) 523, 524
Bse118I RCCGGY 6 cut(s) 374, 398, 408, 438, 512, 740
Bse1I ACTGG 2 cut(s) 142, 469
Bse8I GATNNNNATC 1 cut(s) 885
BseBI CCWGG 2 cut(s) 116, 938
BseDI CCNNGG 5 cut(s) 114, 115, 523, 574, 897
BseJI GATNNNNATC 1 cut(s) 885
BseLI CCNNNNNNNGG 2 cut(s) 523, 524
BseMII CTCAG 1 cut(s) 223
BseNI ACTGG 2 cut(s) 142, 469
BseRI GAGGAG 5 cut(s) 47, 244, 314, 329, 487
BseSI GKGCMC 3 cut(s) 349, 530, 685
BseXI GCAGC 1 cut(s) 621
Bsh1236I CGCG 1 cut(s) 204
BshFI GGCC 5 cut(s) 120, 516, 579, 605, 936
BshNI GGYRCC 2 cut(s) 161, 527
BshTI ACCGGT 4 cut(s) 374, 398, 438, 740
BsiHKAI GWGCWC 2 cut(s) 9, 685
BsiHKCI CYCGRG 2 cut(s) 428, 523
BslFI GGGAC 6 cut(s) 16, 222, 259, 506, 844, 847
BslI CCNNNNNNNGG 2 cut(s) 523, 524
BsmAI GTCTC 4 cut(s) 499, 714, 794, 919
BsmBI CGTCTC 1 cut(s) 499
BsmFI GGGAC 6 cut(s) 16, 222, 259, 506, 844, 847
BsnI GGCC 5 cut(s) 120, 516, 579, 605, 936
Bso31I GGTCTC 1 cut(s) 794
BsoBI CYCGRG 2 cut(s) 428, 523
Bsp1286I GDGCHC 5 cut(s) 9, 78, 349, 530, 685
Bsp143I GATC 5 cut(s) 352, 381, 656, 810, 880
BspANI GGCC 5 cut(s) 120, 516, 579, 605, 936
BspCNI CTCAG 1 cut(s) 222
BspFNI CGCG 1 cut(s) 204
BspLI GGNNCC 7 cut(s) 163, 238, 451, 517, 529, 666, 882
BspMAI CTGCAG 1 cut(s) 611
BspPI GGATC 5 cut(s) 376, 664, 805, 875, 888
BspT107I GGYRCC 2 cut(s) 161, 527
BspTNI GGTCTC 1 cut(s) 794
BsrBI CCGCTC 1 cut(s) 698
BsrFI RCCGGY 6 cut(s) 374, 398, 408, 438, 512, 740
BsrI ACTGG 2 cut(s) 142, 469
BssAI RCCGGY 6 cut(s) 374, 398, 408, 438, 512, 740
BssECI CCNNGG 5 cut(s) 114, 115, 523, 574, 897
BssMI GATC 5 cut(s) 352, 381, 656, 810, 880
BssNI GRCGYC 2 cut(s) 102, 486
Bst2UI CCWGG 2 cut(s) 116, 938
Bst4CI ACNGT 2 cut(s) 687, 861
Bst6I CTCTTC 2 cut(s) 284, 897
BstACI GRCGYC 2 cut(s) 102, 486
BstC8I GCNNGC 1 cut(s) 607
BstDEI CTNAG 1 cut(s) 209
BstFNI CGCG 1 cut(s) 204
BstHHI GCGC 1 cut(s) 113
BstKTI GATC 5 cut(s) 355, 384, 659, 813, 883
BstMAI GTCTC 4 cut(s) 499, 714, 794, 919
BstMBI GATC 5 cut(s) 352, 381, 656, 810, 880
BstMWI GCNNNNNNNGC 7 cut(s) 108, 117, 129, 210, 585, 615, 712
BstNI CCWGG 2 cut(s) 116, 938
BstSCI CCNGG 9 cut(s) 114, 456, 522, 523, 542, 574, 652, 827, 936
BstSFI CTRYAG 1 cut(s) 607
BstSLI GKGCMC 3 cut(s) 349, 530, 685
BstUI CGCG 1 cut(s) 204
BstV1I GCAGC 1 cut(s) 621
BstV2I GAAGAC 1 cut(s) 879
BstX2I RGATCY 1 cut(s) 880
BstYI RGATCY 1 cut(s) 880
BsuRI GGCC 5 cut(s) 120, 516, 579, 605, 936
BtsI GCAGTG 1 cut(s) 813
BtsIMutI CAGTG 1 cut(s) 813
Cac8I GCNNGC 1 cut(s) 607
CfoI GCGC 1 cut(s) 113
Cfr10I RCCGGY 6 cut(s) 374, 398, 408, 438, 512, 740
Cfr13I GGNCC 3 cut(s) 118, 236, 515
Cfr9I CCCGGG 1 cut(s) 523
CseI GACGC 2 cut(s) 91, 193
CspAI ACCGGT 4 cut(s) 374, 398, 438, 740
DdeI CTNAG 1 cut(s) 209
DpnI GATC 5 cut(s) 354, 383, 658, 812, 882
DpnII GATC 5 cut(s) 352, 381, 656, 810, 880
DrdI GACNNNNNNGTC 1 cut(s) 491
DseDI GACNNNNNNGTC 1 cut(s) 491
EaeI YGGCCR 1 cut(s) 934
Eam1104I CTCTTC 2 cut(s) 284, 897
EarI CTCTTC 2 cut(s) 284, 897
EciI GGCGGA 1 cut(s) 702
Eco147I AGGCCT 1 cut(s) 605
Eco24I GRGCYC 1 cut(s) 78
Eco31I GGTCTC 1 cut(s) 794
Eco47I GGWCC 1 cut(s) 236
Eco57I CTGAAG 1 cut(s) 855
Eco88I CYCGRG 2 cut(s) 428, 523
EcoRII CCWGG 2 cut(s) 114, 936
EcoT38I GRGCYC 1 cut(s) 78
Esp3I CGTCTC 1 cut(s) 499
FaiI YATR 5 cut(s) 596, 779, 886, 931, 973
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FaqI GGGAC 6 cut(s) 16, 222, 259, 506, 844, 847
FauI CCCGC 2 cut(s) 194, 898
Fnu4HI GCNGC 6 cut(s) 121, 160, 586, 610, 894, 934
FriOI GRGCYC 1 cut(s) 78
Fsp4HI GCNGC 6 cut(s) 121, 160, 586, 610, 894, 934
FspBI CTAG 1 cut(s) 404
GlaI GCGC 1 cut(s) 112
GluI GCNGC 6 cut(s) 121, 160, 586, 610, 894, 934
GsuI CTGGAG 1 cut(s) 125
HaeIII GGCC 5 cut(s) 120, 516, 579, 605, 936
HgaI GACGC 2 cut(s) 91, 193
HhaI GCGC 1 cut(s) 113
Hin1I GRCGYC 2 cut(s) 102, 486
Hin6I GCGC 1 cut(s) 111
HinP1I GCGC 1 cut(s) 111
HincII GTYRAC 1 cut(s) 490
HindII GTYRAC 1 cut(s) 490
HinfI GANTC 1 cut(s) 632
HphI GGTGA 3 cut(s) 364, 472, 612
Hpy166II GTNNAC 2 cut(s) 490, 683
Hpy188I TCNGA 4 cut(s) 40, 664, 755, 815
Hpy188III TCNNGA 3 cut(s) 283, 394, 404
Hpy8I GTNNAC 2 cut(s) 490, 683
Hpy99I CGWCG 2 cut(s) 488, 664
HpyAV CCTTC 9 cut(s) 34, 88, 157, 238, 307, 327, 463, 484, 634
HpyCH4III ACNGT 2 cut(s) 687, 861
HpyCH4IV ACGT 3 cut(s) 486, 492, 824
HpyCH4V TGCA 3 cut(s) 609, 683, 806
HpyF10VI GCNNNNNNNGC 7 cut(s) 108, 117, 129, 210, 585, 615, 712
HpyF3I CTNAG 1 cut(s) 209
HpySE526I ACGT 3 cut(s) 486, 492, 824
Hsp92I GRCGYC 2 cut(s) 102, 486
HspAI GCGC 1 cut(s) 111
Kzo9I GATC 5 cut(s) 352, 381, 656, 810, 880
LmnI GCTCC 4 cut(s) 204, 455, 664, 695
Lsp1109I GCAGC 1 cut(s) 621
LweI GCATC 1 cut(s) 132
MaeI CTAG 1 cut(s) 404
MaeII ACGT 3 cut(s) 486, 492, 824
MaeIII GTNAC 1 cut(s) 687
MalI GATC 5 cut(s) 354, 383, 658, 812, 882
MbiI CCGCTC 1 cut(s) 698
MboI GATC 5 cut(s) 352, 381, 656, 810, 880
MboII GAAGA 3 cut(s) 271, 884, 914
MflI RGATCY 1 cut(s) 880
MhlI GDGCHC 5 cut(s) 9, 78, 349, 530, 685
MluCI AATT 1 cut(s) 843
MmeI TCCRAC 5 cut(s) 63, 288, 525, 642, 746
MseI TTAA 1 cut(s) 69
MspR9I CCNGG 9 cut(s) 116, 458, 524, 525, 544, 576, 654, 829, 938
MvaI CCWGG 2 cut(s) 116, 938
MvnI CGCG 1 cut(s) 204
MwoI GCNNNNNNNGC 7 cut(s) 108, 117, 129, 210, 585, 615, 712
NciI CCSGG 7 cut(s) 458, 524, 525, 544, 576, 654, 829
NdeII GATC 5 cut(s) 352, 381, 656, 810, 880
NlaIV GGNNCC 7 cut(s) 163, 238, 451, 517, 529, 666, 882
NmeAIII GCCGAG 1 cut(s) 922
NmuCI GTSAC 1 cut(s) 687
PaeR7I CTCGAG 1 cut(s) 428
PasI CCCWGGG 1 cut(s) 115
PceI AGGCCT 1 cut(s) 605
PcsI WCGNNNNNNNCGW 3 cut(s) 78, 132, 656
PfeI GAWTC 1 cut(s) 632
PfoI TCCNGGA 1 cut(s) 827
PinAI ACCGGT 4 cut(s) 374, 398, 438, 740
PkrI GCNGC 6 cut(s) 122, 161, 587, 611, 895, 935
Psp6I CCWGG 2 cut(s) 114, 936
PspGI CCWGG 2 cut(s) 114, 936
PspN4I GGNNCC 7 cut(s) 163, 238, 451, 517, 529, 666, 882
PspPI GGNCC 3 cut(s) 118, 236, 515
PspXI VCTCGAGB 1 cut(s) 428
PstI CTGCAG 1 cut(s) 611
PsuI RGATCY 1 cut(s) 880
SaqAI TTAA 1 cut(s) 69
SatI GCNGC 6 cut(s) 121, 160, 586, 610, 894, 934
Sau3AI GATC 5 cut(s) 352, 381, 656, 810, 880
Sau96I GGNCC 3 cut(s) 118, 236, 515
ScrFI CCNGG 9 cut(s) 116, 458, 524, 525, 544, 576, 654, 829, 938
SduI GDGCHC 5 cut(s) 9, 78, 349, 530, 685
SfaNI GCATC 1 cut(s) 132
SfcI CTRYAG 1 cut(s) 607
Sfr274I CTCGAG 1 cut(s) 428
SinI GGWCC 1 cut(s) 236
SlaI CTCGAG 1 cut(s) 428
SmaI CCCGGG 1 cut(s) 525
SmlI CTYRAG 2 cut(s) 269, 428
SmoI CTYRAG 2 cut(s) 269, 428
Sse9I AATT 1 cut(s) 843
SseBI AGGCCT 1 cut(s) 605
SspMI CTAG 1 cut(s) 404
StuI AGGCCT 1 cut(s) 605
StyD4I CCNGG 9 cut(s) 114, 456, 522, 523, 542, 574, 652, 827, 936
TaaI ACNGT 2 cut(s) 687, 861
TaiI ACGT 3 cut(s) 489, 495, 827
TaqI TCGA 7 cut(s) 45, 81, 192, 380, 429, 854, 911
TasI AATT 1 cut(s) 843
TauI GCSGC 5 cut(s) 123, 162, 588, 896, 936
TfiI GAWTC 1 cut(s) 632
Tru1I TTAA 1 cut(s) 69
Tru9I TTAA 1 cut(s) 69
TscAI CASTG 1 cut(s) 813
TseFI GTSAC 1 cut(s) 687
TseI GCWGC 1 cut(s) 609
Tsp45I GTSAC 1 cut(s) 687
TspDTI ATGAA 1 cut(s) 611
TspGWI ACGGA 1 cut(s) 332
TspMI CCCGGG 1 cut(s) 523
TspRI CASTG 1 cut(s) 813
VneI GTGCAC 1 cut(s) 681
VpaK11BI GGWCC 1 cut(s) 236
XbaI TCTAGA 1 cut(s) 403
XhoI CTCGAG 1 cut(s) 428
XmaI CCCGGG 1 cut(s) 523
XspI CTAG 1 cut(s) 404
ZraI GACGTC 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.