Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002677.1

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

66147 .. 66711

Gene Structure 565 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 468 bp

atgattgctggagccactgtgatggcgttactgatctacccagatctaaagctcacaagtttctatgcatttgttttacttatcatattaaccaacatctctggtgctcttggagttctctccactcttgctggtaccatcttagttgaaagagactgggttgtggtaatatcagaagggcattctccagaagtactaacaaacatgaattcggtcattaggcgtattgatcttttctccaaactttgtgctccggtggtaaccggcttcatcatcagctttgtatcactaaaagcttctgctttaactttagtactctggaataccatatctgtttggctagaatactggctattcatttctgtgtataatgggattccggctttaggcgaaagcagccaaaggaagatatcaagaccttctcaaagtgatcttgaaggcactggcacatctacttctgaagagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0000325 GO:0003674 GO:0005215 GO:0005381 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006824 GO:0006826 GO:0006873 GO:0006875 GO:0006879 GO:0006950 GO:0007154 GO:0008150 GO:0008324 GO:0009267 GO:0009605 GO:0009705 GO:0009987 GO:0009991 GO:0010106 GO:0015075 GO:0015087 GO:0015318 GO:0015675 GO:0016020 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031090 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034220 GO:0034755 GO:0035444 GO:0042592 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0046916 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055068 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071496 GO:0071944 GO:0072511 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04216 ko04978 map04216 map04978

Pfam Domains

Protein Families

FPN1

Protein Analysis

155

Amino Acids

16.85

Weight (kDa)

5.09

Isoelectric Point (pI)

37.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FPN1	PF06963	2 - 143	4.2e-45	Ferroportin1 (FPN1)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	134
AccB1I	GGYRCC	1 cut(s)	134
AcsI	RAATTY	1 cut(s)	208
AfaI	GTAC	3 cut(s)	136, 195, 315
AfiI	CCNNNNNNNGG	1 cut(s)	386
AgsI	TTSAA	2 cut(s)	149, 437
AluBI	AGCT	3 cut(s)	52, 279, 296
AluI	AGCT	3 cut(s)	52, 279, 296
Alw21I	GWGCWC	2 cut(s)	109, 253
Alw26I	GTCTC	1 cut(s)	147
ApeKI	GCWGC	1 cut(s)	396
ApoI	RAATTY	1 cut(s)	208
Asp718I	GGTACC	1 cut(s)	134
BanI	GGYRCC	1 cut(s)	134
Bbv12I	GWGCWC	2 cut(s)	109, 253
BbvI	GCAGC	1 cut(s)	408
BccI	CCATC	2 cut(s)	16, 146
BcoDI	GTCTC	1 cut(s)	147
BfaI	CTAG	1 cut(s)	341
BglII	AGATCT	1 cut(s)	43
BisI	GCNGC	1 cut(s)	397
BlsI	GCNGC	1 cut(s)	398
BmcAI	AGTACT	2 cut(s)	195, 315
BmiI	GGNNCC	2 cut(s)	13, 136
BmrI	ACTGGG	1 cut(s)	166
BmuI	ACTGGG	1 cut(s)	166
BpmI	CTGGAG	2 cut(s)	30, 171
BsaWI	WCCGGW	1 cut(s)	253
BsaXI	ACNNNNNCTCC	1 cut(s)	33
Bsc4I	CCNNNNNNNGG	1 cut(s)	386
Bse118I	RCCGGY	1 cut(s)	263
Bse1I	ACTGG	3 cut(s)	161, 353, 448
BseLI	CCNNNNNNNGG	1 cut(s)	386
BseNI	ACTGG	3 cut(s)	161, 353, 448
BseXI	GCAGC	1 cut(s)	408
BshNI	GGYRCC	1 cut(s)	134
BsiHKAI	GWGCWC	2 cut(s)	109, 253
BsiSI	CCGG	3 cut(s)	254, 264, 380
BslI	CCNNNNNNNGG	1 cut(s)	386
BsmAI	GTCTC	1 cut(s)	147
BsmI	GAATGC	1 cut(s)	181
Bsp1286I	GDGCHC	2 cut(s)	109, 253
Bsp143I	GATC	4 cut(s)	33, 43, 229, 430
BspLI	GGNNCC	2 cut(s)	13, 136
BspT107I	GGYRCC	1 cut(s)	134
BsrFI	RCCGGY	1 cut(s)	263
BsrI	ACTGG	3 cut(s)	161, 353, 448
BssAI	RCCGGY	1 cut(s)	263
BssMI	GATC	4 cut(s)	33, 43, 229, 430
Bst4CI	ACNGT	1 cut(s)	19
Bst6I	CTCTTC	1 cut(s)	456
BstDEI	CTNAG	1 cut(s)	142
BstEII	GGTNACC	1 cut(s)	259
BstKTI	GATC	4 cut(s)	36, 46, 232, 433
BstMAI	GTCTC	1 cut(s)	147
BstMBI	GATC	4 cut(s)	33, 43, 229, 430
BstMWI	GCNNNNNNNGC	1 cut(s)	396
BstPI	GGTNACC	1 cut(s)	259
BstV1I	GCAGC	1 cut(s)	408
BstX2I	RGATCY	1 cut(s)	43
BstXI	CCANNNNNNTGG	1 cut(s)	22
BstYI	RGATCY	1 cut(s)	43
BtsIMutI	CAGTG	2 cut(s)	15, 441
Cfr10I	RCCGGY	1 cut(s)	263
Csp6I	GTAC	3 cut(s)	135, 194, 314
CviAII	CATG	1 cut(s)	205
CviJI	RGCY	9 cut(s)	14, 52, 267, 279, 296, 340, 352, 383, 399
CviKI_1	RGCY	9 cut(s)	14, 52, 267, 279, 296, 340, 352, 383, 399
CviQI	GTAC	3 cut(s)	135, 194, 314
DdeI	CTNAG	1 cut(s)	142
DpnI	GATC	4 cut(s)	35, 45, 231, 432
DpnII	GATC	4 cut(s)	33, 43, 229, 430
Eam1104I	CTCTTC	1 cut(s)	456
EarI	CTCTTC	1 cut(s)	456
Eco32I	GATATC	1 cut(s)	411
Eco91I	GGTNACC	1 cut(s)	259
EcoO65I	GGTNACC	1 cut(s)	259
EcoRI	GAATTC	1 cut(s)	208
EcoRV	GATATC	1 cut(s)	411
EcoT22I	ATGCAT	1 cut(s)	70
FaeI	CATG	1 cut(s)	208
FaiI	YATR	5 cut(s)	66, 86, 206, 329, 369
FatI	CATG	1 cut(s)	204
Fnu4HI	GCNGC	1 cut(s)	397
Fsp4HI	GCNGC	1 cut(s)	397
FspBI	CTAG	1 cut(s)	341
GluI	GCNGC	1 cut(s)	397
GsuI	CTGGAG	2 cut(s)	30, 171
HapII	CCGG	3 cut(s)	254, 264, 380
Hin1II	CATG	1 cut(s)	208
HindIII	AAGCTT	1 cut(s)	294
HinfI	GANTC	1 cut(s)	376
HpaII	CCGG	3 cut(s)	254, 264, 380
Hpy188I	TCNGA	2 cut(s)	175, 460
Hpy188III	TCNNGA	4 cut(s)	188, 319, 414, 434
HpyAV	CCTTC	3 cut(s)	170, 429, 431
HpyCH4III	ACNGT	1 cut(s)	19
HpyCH4V	TGCA	1 cut(s)	68
HpyF10VI	GCNNNNNNNGC	1 cut(s)	396
HpyF3I	CTNAG	1 cut(s)	142
Hsp92II	CATG	1 cut(s)	208
KpnI	GGTACC	1 cut(s)	138
Kzo9I	GATC	4 cut(s)	33, 43, 229, 430
LmnI	GCTCC	2 cut(s)	11, 256
Lsp1109I	GCAGC	1 cut(s)	408
MaeI	CTAG	1 cut(s)	341
MaeIII	GTNAC	2 cut(s)	27, 259
MalI	GATC	4 cut(s)	35, 45, 231, 432
MboI	GATC	4 cut(s)	33, 43, 229, 430
MboII	GAAGA	1 cut(s)	418
MflI	RGATCY	1 cut(s)	43
MhlI	GDGCHC	2 cut(s)	109, 253
MluCI	AATT	1 cut(s)	208
Mph1103I	ATGCAT	1 cut(s)	70
MseI	TTAA	2 cut(s)	89, 305
MslI	CAYNNNNRTG	2 cut(s)	20, 362
MspI	CCGG	3 cut(s)	254, 264, 380
Mva1269I	GAATGC	1 cut(s)	181
MwoI	GCNNNNNNNGC	1 cut(s)	396
NdeII	GATC	4 cut(s)	33, 43, 229, 430
NlaIII	CATG	1 cut(s)	208
NlaIV	GGNNCC	2 cut(s)	13, 136
NsiI	ATGCAT	1 cut(s)	70
PctI	GAATGC	1 cut(s)	181
PfeI	GAWTC	1 cut(s)	376
PkrI	GCNGC	1 cut(s)	398
PspEI	GGTNACC	1 cut(s)	259
PspN4I	GGNNCC	2 cut(s)	13, 136
PsuI	RGATCY	1 cut(s)	43
RsaI	GTAC	3 cut(s)	136, 195, 315
RsaNI	GTAC	3 cut(s)	135, 194, 314
RseI	CAYNNNNRTG	2 cut(s)	20, 362
SaqAI	TTAA	2 cut(s)	89, 305
SatI	GCNGC	1 cut(s)	397
Sau3AI	GATC	4 cut(s)	33, 43, 229, 430
ScaI	AGTACT	2 cut(s)	195, 315
SduI	GDGCHC	2 cut(s)	109, 253
SetI	ASST	4 cut(s)	54, 281, 298, 421
SmiMI	CAYNNNNRTG	2 cut(s)	20, 362
Sse9I	AATT	1 cut(s)	208
SspMI	CTAG	1 cut(s)	341
TaaI	ACNGT	1 cut(s)	19
TaqII	GACCGA	1 cut(s)	202
TasI	AATT	1 cut(s)	208
TatI	WGTACW	2 cut(s)	193, 313
TfiI	GAWTC	1 cut(s)	376
Tru1I	TTAA	2 cut(s)	89, 305
Tru9I	TTAA	2 cut(s)	89, 305
TscAI	CASTG	2 cut(s)	22, 448
TseI	GCWGC	1 cut(s)	396
TspDTI	ATGAA	3 cut(s)	221, 259, 346
TspRI	CASTG	2 cut(s)	22, 448
XapI	RAATTY	1 cut(s)	208
XspI	CTAG	1 cut(s)	341
ZrmI	AGTACT	2 cut(s)	195, 315
Zsp2I	ATGCAT	1 cut(s)	70

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.