Rmu_sc0002788.1_g000007

Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002788.1
N/A
Physical Location & Seq
Reverse (-)
21963 .. 22590
628 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 294 bp
atgagtgggattctccacatccaaggcggcacccatattggagccaagttctgggaggtgctctgtgtcgagcacggcatcaacagctttgggaactccatttatcagattgagatgatcaagtacatcaagaaaatgtactcagatttggatgtggttggtgggaatgtggtgactgtgagtcaggcacagaatttgattcaggctggtgttgatgggttgagggttgggatggggtctggctccatttgtactactcaagaggtttgcgccgtcggcaggggacaggtataa

Protein Analysis

97

Amino Acids

10.31

Weight (kDa)

6.24

Isoelectric Point (pI)

30.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IMPDH PF00478 29 - 97 3.3e-24 IMP dehydrogenase / GMP reductase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 29
AccB7I CCANNNNNTGG 1 cut(s) 51
AciI CCGC 1 cut(s) 27
AcsI RAATTY 1 cut(s) 193
AfaI GTAC 3 cut(s) 125, 140, 253
AfiI CCNNNNNNNGG 2 cut(s) 51, 279
AhdI GACNNNNNGTC 1 cut(s) 180
AluBI AGCT 1 cut(s) 87
AluI AGCT 1 cut(s) 87
Alw21I GWGCWC 2 cut(s) 63, 75
ApoI RAATTY 1 cut(s) 193
AspLEI GCGC 1 cut(s) 272
AsuHPI GGTGA 1 cut(s) 184
BanI GGYRCC 1 cut(s) 29
Bbv12I GWGCWC 2 cut(s) 63, 75
BccI CCATC 2 cut(s) 209, 226
BceAI ACGGC 2 cut(s) 91, 257
BclI TGATCA 1 cut(s) 117
BisI GCNGC 1 cut(s) 28
BlsI GCNGC 1 cut(s) 29
BmeRI GACNNNNNGTC 1 cut(s) 180
BmiI GGNNCC 3 cut(s) 31, 43, 244
BmsI GCATC 1 cut(s) 87
BpuEI CTTGAG 1 cut(s) 243
BsaJI CCNNGG 1 cut(s) 22
Bsc4I CCNNNNNNNGG 2 cut(s) 51, 279
BseDI CCNNGG 1 cut(s) 22
BseGI GGATG 3 cut(s) 18, 157, 237
BseLI CCNNNNNNNGG 2 cut(s) 51, 279
BseMII CTCAG 1 cut(s) 156
BshNI GGYRCC 1 cut(s) 29
BsiHKAI GWGCWC 2 cut(s) 63, 75
BslI CCNNNNNNNGG 2 cut(s) 51, 279
Bsp1286I GDGCHC 2 cut(s) 63, 75
Bsp143I GATC 1 cut(s) 117
BspACI CCGC 1 cut(s) 27
BspCNI CTCAG 1 cut(s) 155
BspLI GGNNCC 3 cut(s) 31, 43, 244
BspT107I GGYRCC 1 cut(s) 29
BssECI CCNNGG 1 cut(s) 22
BssMI GATC 1 cut(s) 117
BssT1I CCWWGG 1 cut(s) 22
Bst4CI ACNGT 1 cut(s) 178
BstDEI CTNAG 1 cut(s) 142
BstF5I GGATG 3 cut(s) 18, 157, 237
BstHHI GCGC 1 cut(s) 272
BstKTI GATC 1 cut(s) 120
BstMBI GATC 1 cut(s) 117
BstMWI GCNNNNNNNGC 2 cut(s) 84, 276
BtsCI GGATG 3 cut(s) 18, 157, 237
CfoI GCGC 1 cut(s) 272
Csp6I GTAC 3 cut(s) 124, 139, 252
CviJI RGCY 4 cut(s) 44, 87, 206, 243
CviKI_1 RGCY 4 cut(s) 44, 87, 206, 243
CviQI GTAC 3 cut(s) 124, 139, 252
DdeI CTNAG 1 cut(s) 142
DpnI GATC 1 cut(s) 119
DpnII GATC 1 cut(s) 117
DriI GACNNNNNGTC 1 cut(s) 180
Eam1105I GACNNNNNGTC 1 cut(s) 180
Eco130I CCWWGG 1 cut(s) 22
EcoT14I CCWWGG 1 cut(s) 22
ErhI CCWWGG 1 cut(s) 22
FaiI YATR 2 cut(s) 36, 292
FbaI TGATCA 1 cut(s) 117
Fnu4HI GCNGC 1 cut(s) 28
FokI GGATG 3 cut(s) 5, 164, 244
Fsp4HI GCNGC 1 cut(s) 28
GlaI GCGC 1 cut(s) 271
GluI GCNGC 1 cut(s) 28
HhaI GCGC 1 cut(s) 272
Hin6I GCGC 1 cut(s) 270
HinP1I GCGC 1 cut(s) 270
HinfI GANTC 3 cut(s) 10, 181, 199
HphI GGTGA 1 cut(s) 184
Hpy188I TCNGA 2 cut(s) 108, 145
Hpy188III TCNNGA 2 cut(s) 130, 260
Hpy99I CGWCG 1 cut(s) 278
HpyCH4III ACNGT 1 cut(s) 178
HpyF10VI GCNNNNNNNGC 2 cut(s) 84, 276
HpyF3I CTNAG 1 cut(s) 142
HspAI GCGC 1 cut(s) 270
Ksp22I TGATCA 1 cut(s) 117
Kzo9I GATC 1 cut(s) 117
LmnI GCTCC 2 cut(s) 41, 248
LpnPI CCDG 7 cut(s) 37, 170, 188, 192, 225, 265, 272
LweI GCATC 1 cut(s) 87
MaeIII GTNAC 1 cut(s) 172
MalI GATC 1 cut(s) 119
MboI GATC 1 cut(s) 117
MhlI GDGCHC 2 cut(s) 63, 75
MluCI AATT 1 cut(s) 193
MlyI GAGTC 1 cut(s) 190
MnlI CCTC 3 cut(s) 49, 216, 256
MwoI GCNNNNNNNGC 2 cut(s) 84, 276
NdeII GATC 1 cut(s) 117
NlaIV GGNNCC 3 cut(s) 31, 43, 244
NmuCI GTSAC 1 cut(s) 172
PfeI GAWTC 2 cut(s) 10, 199
PflMI CCANNNNNTGG 1 cut(s) 51
PkrI GCNGC 1 cut(s) 29
PleI GAGTC 1 cut(s) 189
PpsI GAGTC 1 cut(s) 189
PspN4I GGNNCC 3 cut(s) 31, 43, 244
RsaI GTAC 3 cut(s) 125, 140, 253
RsaNI GTAC 3 cut(s) 124, 139, 252
SatI GCNGC 1 cut(s) 28
Sau3AI GATC 1 cut(s) 117
SchI GAGTC 1 cut(s) 190
SduI GDGCHC 2 cut(s) 63, 75
SetI ASST 4 cut(s) 60, 89, 267, 291
SfaNI GCATC 1 cut(s) 87
SmlI CTYRAG 1 cut(s) 258
SmoI CTYRAG 1 cut(s) 258
Sse9I AATT 1 cut(s) 193
SsiI CCGC 1 cut(s) 27
StyI CCWWGG 1 cut(s) 22
TaaI ACNGT 1 cut(s) 178
TaqI TCGA 1 cut(s) 69
TasI AATT 1 cut(s) 193
TatI WGTACW 3 cut(s) 123, 138, 251
TauI GCSGC 1 cut(s) 30
TfiI GAWTC 2 cut(s) 10, 199
TseFI GTSAC 1 cut(s) 172
Tsp45I GTSAC 1 cut(s) 172
Van91I CCANNNNNTGG 1 cut(s) 51
XapI RAATTY 1 cut(s) 193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.