Rmu_sc0002832.1_g000001

O-glucosyltransferase rumi homolog

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002832.1
N/A
Physical Location & Seq
Forward (+)
38 .. 349
312 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 312 bp
atggactatgtgtatgactacatgtttcatcttttaagcgaatacgcaaagctcttgcaattcaagccgaccatacctcgaaaagctatcgaactctgctcagaggcaatggcgtgccaagcaaaaggactggagaagcaatttatgatggaatccatggtgaagggtcctgcaatcactagcccatgtaccatgcctcctccatatgaccctccttctctattttcagtactcaggagacaatcaaattcaattaaacaggttgaaaaatgggagaagggttactgggaaaatcaacataagcaatcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

12.03

Weight (kDa)

8.42

Isoelectric Point (pI)

72.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_90 PF05686 1 - 92 1.9e-34 Glycosyl transferase family 90
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 247
AfaI GTAC 2 cut(s) 190, 231
AflIII ACRYGT 1 cut(s) 21
AgsI TTSAA 3 cut(s) 64, 252, 266
AluBI AGCT 2 cut(s) 52, 86
AluI AGCT 2 cut(s) 52, 86
Alw26I GTCTC 1 cut(s) 232
ApoI RAATTY 1 cut(s) 247
AspS9I GGNCC 1 cut(s) 167
AsuHPI GGTGA 1 cut(s) 172
AvaII GGWCC 1 cut(s) 167
BccI CCATC 1 cut(s) 142
BcoDI GTCTC 1 cut(s) 232
BfaI CTAG 1 cut(s) 180
BmcAI AGTACT 1 cut(s) 231
Bme18I GGWCC 1 cut(s) 167
BmgT120I GGNCC 1 cut(s) 167
BmiI GGNNCC 1 cut(s) 168
BmrI ACTGGG 1 cut(s) 295
BmuI ACTGGG 1 cut(s) 295
BpmI CTGGAG 1 cut(s) 152
BsaJI CCNNGG 1 cut(s) 156
BsaXI ACNNNNNCTCC 2 cut(s) 181, 211
Bse1I ACTGG 2 cut(s) 135, 290
Bse3DI GCAATG 1 cut(s) 114
BseDI CCNNGG 1 cut(s) 156
BseMI GCAATG 1 cut(s) 114
BseMII CTCAG 2 cut(s) 114, 247
BseNI ACTGG 2 cut(s) 135, 290
BseRI GAGGAG 1 cut(s) 189
BsmAI GTCTC 1 cut(s) 232
Bsp19I CCATGG 1 cut(s) 156
BspCNI CTCAG 2 cut(s) 113, 246
BspLI GGNNCC 1 cut(s) 168
BsrDI GCAATG 1 cut(s) 114
BsrI ACTGG 2 cut(s) 135, 290
BssECI CCNNGG 1 cut(s) 156
BssT1I CCWWGG 1 cut(s) 156
BstC8I GCNNGC 1 cut(s) 115
BstDEI CTNAG 2 cut(s) 100, 233
BstDSI CCRYGG 1 cut(s) 156
BstMAI GTCTC 1 cut(s) 232
BstMWI GCNNNNNNNGC 2 cut(s) 64, 119
BstNSI RCATGY 1 cut(s) 25
BtgI CCRYGG 1 cut(s) 156
Cac8I GCNNGC 1 cut(s) 115
Cfr13I GGNCC 1 cut(s) 167
Csp6I GTAC 2 cut(s) 189, 230
CviAII CATG 4 cut(s) 22, 157, 186, 193
CviJI RGCY 4 cut(s) 52, 67, 86, 183
CviKI_1 RGCY 4 cut(s) 52, 67, 86, 183
CviQI GTAC 2 cut(s) 189, 230
DdeI CTNAG 2 cut(s) 100, 233
Eco130I CCWWGG 1 cut(s) 156
Eco47I GGWCC 1 cut(s) 167
EcoO109I RGGNCCY 1 cut(s) 167
EcoT14I CCWWGG 1 cut(s) 156
ErhI CCWWGG 1 cut(s) 156
FaeI CATG 4 cut(s) 25, 160, 189, 196
FatI CATG 4 cut(s) 21, 156, 185, 192
FauNDI CATATG 1 cut(s) 205
FspBI CTAG 1 cut(s) 180
GsuI CTGGAG 1 cut(s) 152
Hin1II CATG 4 cut(s) 25, 160, 189, 196
HinfI GANTC 1 cut(s) 152
HphI GGTGA 1 cut(s) 172
Hpy188I TCNGA 1 cut(s) 103
Hpy188III TCNNGA 1 cut(s) 235
HpyAV CCTTC 3 cut(s) 157, 225, 271
HpyCH4V TGCA 2 cut(s) 58, 173
HpyF10VI GCNNNNNNNGC 2 cut(s) 64, 119
HpyF3I CTNAG 2 cut(s) 100, 233
Hsp92II CATG 4 cut(s) 25, 160, 189, 196
LpnPI CCDG 5 cut(s) 116, 183, 220, 245, 271
MaeI CTAG 1 cut(s) 180
MaeIII GTNAC 1 cut(s) 281
MluCI AATT 4 cut(s) 59, 140, 247, 252
MnlI CCTC 5 cut(s) 87, 97, 207, 210, 222
MseI TTAA 2 cut(s) 35, 255
MwoI GCNNNNNNNGC 2 cut(s) 64, 119
NcoI CCATGG 1 cut(s) 156
NdeI CATATG 1 cut(s) 205
NlaIII CATG 4 cut(s) 25, 160, 189, 196
NlaIV GGNNCC 1 cut(s) 168
NspI RCATGY 1 cut(s) 25
PciI ACATGT 1 cut(s) 21
PfeI GAWTC 1 cut(s) 152
PpuMI RGGWCCY 1 cut(s) 167
PscI ACATGT 1 cut(s) 21
Psp5II RGGWCCY 1 cut(s) 167
PspN4I GGNNCC 1 cut(s) 168
PspPI GGNCC 1 cut(s) 167
PspPPI RGGWCCY 1 cut(s) 167
RsaI GTAC 2 cut(s) 190, 231
RsaNI GTAC 2 cut(s) 189, 230
SaqAI TTAA 2 cut(s) 35, 255
Sau96I GGNCC 1 cut(s) 167
ScaI AGTACT 1 cut(s) 231
SetI ASST 4 cut(s) 54, 79, 88, 264
SinI GGWCC 1 cut(s) 167
Sse9I AATT 4 cut(s) 59, 140, 247, 252
SspMI CTAG 1 cut(s) 180
StyI CCWWGG 1 cut(s) 156
TaqI TCGA 2 cut(s) 79, 90
TasI AATT 4 cut(s) 59, 140, 247, 252
TatI WGTACW 1 cut(s) 229
TfiI GAWTC 1 cut(s) 152
Tru1I TTAA 2 cut(s) 35, 255
Tru9I TTAA 2 cut(s) 35, 255
TspDTI ATGAA 1 cut(s) 17
VpaK11BI GGWCC 1 cut(s) 167
XapI RAATTY 1 cut(s) 247
XceI RCATGY 1 cut(s) 25
XspI CTAG 1 cut(s) 180
ZrmI AGTACT 1 cut(s) 231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.