Rmu_sc0002836.1_g000002

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002836.1
N/A
Physical Location & Seq
Forward (+)
2503 .. 2748
246 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 246 bp
atgagtaacctgaacaacttggactttgctcaattgggaacaactggctctggatatcacatgtgggttcgtgatgtccaccagcatctcaaggccgatggaatcctagatacgattctcaagcctagccagaacgtgctaactgttgagcaagctcaagctttggaagccaatagagcagctttagaggaaaataaggcgaaagccaccatcctaatgactcgtcatatggatgatctgctctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

81

Amino Acids

9.03

Weight (kDa)

5.68

Isoelectric Point (pI)

27.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AflIII ACRYGT 1 cut(s) 60
AluBI AGCT 3 cut(s) 155, 161, 182
AluI AGCT 3 cut(s) 155, 161, 182
AoxI GGCC 1 cut(s) 93
ApeKI GCWGC 1 cut(s) 179
BbvI GCAGC 1 cut(s) 191
BccI CCATC 2 cut(s) 92, 218
BfaI CTAG 3 cut(s) 107, 126, 244
BisI GCNGC 1 cut(s) 180
BlsI GCNGC 1 cut(s) 181
BmsI GCATC 1 cut(s) 94
BpuEI CTTGAG 3 cut(s) 74, 104, 141
Bse1I ACTGG 1 cut(s) 49
BseGI GGATG 2 cut(s) 210, 238
BseNI ACTGG 1 cut(s) 49
BseXI GCAGC 1 cut(s) 191
BshFI GGCC 1 cut(s) 95
BsnI GGCC 1 cut(s) 95
Bsp143I GATC 1 cut(s) 235
BspANI GGCC 1 cut(s) 95
BsrI ACTGG 1 cut(s) 49
BssMI GATC 1 cut(s) 235
Bst4CI ACNGT 1 cut(s) 145
BstC8I GCNNGC 1 cut(s) 153
BstF5I GGATG 2 cut(s) 210, 238
BstKTI GATC 1 cut(s) 238
BstMBI GATC 1 cut(s) 235
BstMWI GCNNNNNNNGC 2 cut(s) 167, 176
BstNSI RCATGY 1 cut(s) 64
BstV1I GCAGC 1 cut(s) 191
BsuRI GGCC 1 cut(s) 95
BtsCI GGATG 2 cut(s) 210, 238
Cac8I GCNNGC 1 cut(s) 153
CviAII CATG 1 cut(s) 61
CviJI RGCY 9 cut(s) 48, 95, 124, 129, 155, 161, 170, 182, 206
CviKI_1 RGCY 9 cut(s) 48, 95, 124, 129, 155, 161, 170, 182, 206
DpnI GATC 1 cut(s) 237
DpnII GATC 1 cut(s) 235
Eco32I GATATC 1 cut(s) 56
EcoRV GATATC 1 cut(s) 56
FaeI CATG 1 cut(s) 64
FaiI YATR 3 cut(s) 62, 228, 230
FatI CATG 1 cut(s) 60
FauNDI CATATG 1 cut(s) 228
Fnu4HI GCNGC 1 cut(s) 180
FokI GGATG 1 cut(s) 197
Fsp4HI GCNGC 1 cut(s) 180
FspBI CTAG 3 cut(s) 107, 126, 244
GluI GCNGC 1 cut(s) 180
HaeIII GGCC 1 cut(s) 95
Hin1II CATG 1 cut(s) 64
HindIII AAGCTT 1 cut(s) 159
HinfI GANTC 3 cut(s) 102, 115, 220
Hpy166II GTNNAC 1 cut(s) 79
Hpy188III TCNNGA 2 cut(s) 51, 71
Hpy8I GTNNAC 1 cut(s) 79
HpyCH4III ACNGT 1 cut(s) 145
HpyCH4IV ACGT 1 cut(s) 135
HpyF10VI GCNNNNNNNGC 2 cut(s) 167, 176
HpySE526I ACGT 1 cut(s) 135
Hsp92II CATG 1 cut(s) 64
Kzo9I GATC 1 cut(s) 235
LpnPI CCDG 5 cut(s) 23, 30, 36, 95, 143
Lsp1109I GCAGC 1 cut(s) 191
LweI GCATC 1 cut(s) 94
MaeI CTAG 3 cut(s) 107, 126, 244
MaeII ACGT 1 cut(s) 135
MaeIII GTNAC 1 cut(s) 5
MalI GATC 1 cut(s) 237
MboI GATC 1 cut(s) 235
MfeI CAATTG 1 cut(s) 32
MluCI AATT 1 cut(s) 32
MlyI GAGTC 1 cut(s) 214
MnlI CCTC 1 cut(s) 181
MslI CAYNNNNRTG 2 cut(s) 215, 231
MunI CAATTG 1 cut(s) 32
MwoI GCNNNNNNNGC 2 cut(s) 167, 176
NdeI CATATG 1 cut(s) 228
NdeII GATC 1 cut(s) 235
NlaIII CATG 1 cut(s) 64
NspI RCATGY 1 cut(s) 64
PciI ACATGT 1 cut(s) 60
PfeI GAWTC 2 cut(s) 102, 115
PkrI GCNGC 1 cut(s) 181
PleI GAGTC 1 cut(s) 214
PpsI GAGTC 1 cut(s) 214
PscI ACATGT 1 cut(s) 60
RseI CAYNNNNRTG 2 cut(s) 215, 231
SatI GCNGC 1 cut(s) 180
Sau3AI GATC 1 cut(s) 235
SchI GAGTC 1 cut(s) 214
SetI ASST 5 cut(s) 12, 138, 157, 163, 184
SfaNI GCATC 1 cut(s) 94
SmiMI CAYNNNNRTG 2 cut(s) 215, 231
SmlI CTYRAG 3 cut(s) 89, 119, 156
SmoI CTYRAG 3 cut(s) 89, 119, 156
Sse9I AATT 1 cut(s) 32
SspMI CTAG 3 cut(s) 107, 126, 244
TaaI ACNGT 1 cut(s) 145
TaiI ACGT 1 cut(s) 138
TasI AATT 1 cut(s) 32
TfiI GAWTC 2 cut(s) 102, 115
TseI GCWGC 1 cut(s) 179
XceI RCATGY 1 cut(s) 64
XspI CTAG 3 cut(s) 107, 126, 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.