Rmu_sc0002971.1_g000001

NADP-dependent malic

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002971.1
N/A
Physical Location & Seq
Reverse (-)
1 .. 1306
1306 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 227 bp
atgataatatctgccgtagcctctaatatgatgatgtctctgaccagacgcacttttctgaagagaatagtgggtgtgggagaaccaaaggtttgggctttcatggggagtatagtgaaggagatggagagcaaggctggttttggtgggggtgttcaggacgtgtacggtgaggattgtgcttcggaggaacaggttctcaccccctggactgcttctgttgcaag

Protein Analysis

75

Amino Acids

8.09

Weight (kDa)

5.22

Isoelectric Point (pI)

34.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 80
AfaI GTAC 1 cut(s) 167
AflIII ACRYGT 1 cut(s) 162
AjiI CACGTC 1 cut(s) 163
AjnI CCWGG 1 cut(s) 206
Alw26I GTCTC 1 cut(s) 42
Asp700I GAANNNNTTC 1 cut(s) 195
AsuHPI GGTGA 2 cut(s) 182, 193
BccI CCATC 1 cut(s) 118
BciT130I CCWGG 1 cut(s) 208
BcoDI GTCTC 1 cut(s) 42
Bme1390I CCNGG 1 cut(s) 208
BmgBI CACGTC 1 cut(s) 163
BmrFI CCNGG 1 cut(s) 208
BsaJI CCNNGG 1 cut(s) 206
BseBI CCWGG 1 cut(s) 208
BseDI CCNNGG 1 cut(s) 206
BsmAI GTCTC 1 cut(s) 42
BssECI CCNNGG 1 cut(s) 206
Bst2UI CCWGG 1 cut(s) 208
Bst4CI ACNGT 1 cut(s) 170
Bst6I CTCTTC 1 cut(s) 56
BstMAI GTCTC 1 cut(s) 42
BstMWI GCNNNNNNNGC 1 cut(s) 221
BstNI CCWGG 1 cut(s) 208
BstSCI CCNGG 1 cut(s) 206
BstXI CCANNNNNNTGG 1 cut(s) 93
BtrI CACGTC 1 cut(s) 163
CseI GACGC 1 cut(s) 57
Csp6I GTAC 1 cut(s) 166
CviAII CATG 1 cut(s) 103
CviJI RGCY 3 cut(s) 20, 98, 137
CviKI_1 RGCY 3 cut(s) 20, 98, 137
CviQI GTAC 1 cut(s) 166
Eam1104I CTCTTC 1 cut(s) 56
EarI CTCTTC 1 cut(s) 56
Eco57I CTGAAG 1 cut(s) 80
EcoRII CCWGG 1 cut(s) 206
FaeI CATG 1 cut(s) 106
FaiI YATR 3 cut(s) 29, 104, 113
FatI CATG 1 cut(s) 102
HgaI GACGC 1 cut(s) 57
Hin1II CATG 1 cut(s) 106
HphI GGTGA 2 cut(s) 182, 193
Hpy166II GTNNAC 1 cut(s) 166
Hpy188I TCNGA 3 cut(s) 42, 60, 187
Hpy188III TCNNGA 1 cut(s) 158
Hpy8I GTNNAC 1 cut(s) 166
HpyAV CCTTC 1 cut(s) 112
HpyCH4III ACNGT 1 cut(s) 170
HpyCH4IV ACGT 1 cut(s) 162
HpyCH4V TGCA 1 cut(s) 224
HpyF10VI GCNNNNNNNGC 1 cut(s) 221
HpySE526I ACGT 1 cut(s) 162
Hsp92II CATG 1 cut(s) 106
LpnPI CCDG 6 cut(s) 58, 123, 143, 179, 193, 220
MaeII ACGT 1 cut(s) 162
MboII GAAGA 1 cut(s) 73
MnlI CCTC 3 cut(s) 31, 166, 181
MroXI GAANNNNTTC 1 cut(s) 195
MspR9I CCNGG 1 cut(s) 208
MvaI CCWGG 1 cut(s) 208
MwoI GCNNNNNNNGC 1 cut(s) 221
NlaIII CATG 1 cut(s) 106
PdmI GAANNNNTTC 1 cut(s) 195
Psp6I CCWGG 1 cut(s) 206
PspGI CCWGG 1 cut(s) 206
RsaI GTAC 1 cut(s) 167
RsaNI GTAC 1 cut(s) 166
ScrFI CCNGG 1 cut(s) 208
SetI ASST 3 cut(s) 93, 165, 198
SgeI CNNG 9 cut(s) 57, 115, 145, 150, 170, 175, 206, 219, 220
StyD4I CCNGG 1 cut(s) 206
TaaI ACNGT 1 cut(s) 170
TaiI ACGT 1 cut(s) 165
TspDTI ATGAA 1 cut(s) 91
XmnI GAANNNNTTC 1 cut(s) 195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.