Rmu_sc0003510.1_g000028

Carboxylesterase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003510.1
N/A
Physical Location & Seq
Reverse (-)
111146 .. 114102
2957 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1068 bp
atgttgcgcatggagaggatgactgtcgatcaggcgaaggcgggcccactcgaaagggacattcacttgcttttattgctagtgacagtagcttttgtgacatcgccgaaggttgtcggaaatctcaccagagtagcttttgttgctggggacagtagcttttgtggtcgccggaggttcgccgaaagtcggccggaggtcggccggaaacccgctggactccctacaaaggcgtcaccacctccgacgtcaccgtcgaccaaacccgcaacctctggttccgcttcttcgtcccctctacgacgtcgtcttcccccgcctctttacccgtcgtcgttttcttccacggcggcggctttaacggacgccgctcgccgaccaaacggcaccatcaaccgccgtctcatgagcttcctcgacttatgctcctccgccactccctcaaccccctacaaaggcgtcaccacctctgacgtcaccgtcgaccaaacccgcaacctctggttccgcttcttcgtcccctctacgacgtcgtcttcccccgcctctttacccgtcgtcgttttcttccacggcggcggcttcagctttctcaaccccgactcctacgcctacgacgtcgtctgcctcaaattcgccccagaaatccccgccgtcgtagtctccgtcaactaccgcctctccccggagcacggctacccctgccagtacgacgacggcctcgacgtcctcaaattcctcgaccaaaaccccgactccctccccgacctcgctgactgctcccgctgcttcctcgccggagacagcgccggcccgaacattgcccaccacgtggcggtgcaagcctgccgcgagccgttttgggtcgtgaaaccaatcgggttgatatcgatccaaccgttcttcggcggcgaggaacggaccgagtccgagatcctactcgagggcgcgccgctggtgtcggtgacccgaactgattggctgtggaaggctttcttgccacaaaacccagaatcctgccacaaaacccagaaacccggtggcttcgttgagactgaggagatttga

Protein Analysis

355

Amino Acids

38.6

Weight (kDa)

7.58

Isoelectric Point (pI)

63.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COesterase PF00135 171 - 229 7.1e-07 Carboxylesterase family
BD-FAE PF20434 181 - 281 1.2e-09 BD-FAE
Abhydrolase_3 PF07859 187 - 336 2.8e-35 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 253, 479
AatII GACGTC 6 cut(s) 251, 307, 477, 533, 621, 729
Acc16I TGCGCA 1 cut(s) 8
AccB1I GGYRCC 1 cut(s) 386
AccB7I CCANNNNNTGG 1 cut(s) 832
AccBSI CCGCTC 1 cut(s) 371
AccI GTMKAC 2 cut(s) 257, 483
AccII CGCG 2 cut(s) 852, 950
AclWI GGATC 2 cut(s) 886, 928
AcoI YGGCCR 2 cut(s) 191, 202
AcsI RAATTY 2 cut(s) 632, 734
AcuI CTGAAG 1 cut(s) 568
AcvI CACGTG 1 cut(s) 832
AcyI GRCGYC 9 cut(s) 233, 248, 304, 366, 459, 474, 530, 618, 726
AdeI CACNNNGTG 1 cut(s) 832
AfaI GTAC 1 cut(s) 710
AluBI AGCT 5 cut(s) 92, 137, 159, 411, 588
AluI AGCT 5 cut(s) 92, 137, 159, 411, 588
Alw21I GWGCWC 1 cut(s) 693
Alw26I GTCTC 4 cut(s) 407, 667, 795, 1046
AlwI GGATC 2 cut(s) 886, 928
Ama87I CYCGRG 1 cut(s) 941
AoxI GGCC 5 cut(s) 43, 191, 202, 718, 811
ApaI GGGCCC 1 cut(s) 47
ApeKI GCWGC 1 cut(s) 786
ApoI RAATTY 2 cut(s) 632, 734
AscI GGCGCGCC 1 cut(s) 948
Asp700I GAANNNNTTC 1 cut(s) 992
AspLEI GCGC 4 cut(s) 9, 809, 950, 952
AspS9I GGNCC 4 cut(s) 43, 44, 812, 921
AsuC2I CCSGG 2 cut(s) 686, 1038
AsuHPI GGTGA 6 cut(s) 118, 228, 243, 454, 469, 976
AvaI CYCGRG 1 cut(s) 941
AvaII GGWCC 1 cut(s) 921
BaeGI GKGCMC 1 cut(s) 47
BanI GGYRCC 1 cut(s) 386
BanII GRGCYC 1 cut(s) 47
BbrPI CACGTG 1 cut(s) 832
BbsI GAAGAC 2 cut(s) 302, 528
Bbv12I GWGCWC 1 cut(s) 693
BbvI GCAGC 1 cut(s) 773
BccI CCATC 1 cut(s) 398
BceAI ACGGC 8 cut(s) 363, 384, 400, 589, 638, 709, 733, 841
BcnI CCSGG 2 cut(s) 686, 1038
BcoDI GTCTC 4 cut(s) 407, 667, 795, 1046
BfaI CTAG 1 cut(s) 80
BfoI RGCGCY 1 cut(s) 810
BisI GCNGC 9 cut(s) 351, 354, 369, 577, 580, 787, 850, 910, 953
BlsI GCNGC 9 cut(s) 352, 355, 370, 578, 581, 788, 851, 911, 954
Bme1390I CCNGG 2 cut(s) 686, 1038
Bme18I GGWCC 1 cut(s) 921
BmeT110I CYCGRG 1 cut(s) 941
BmgT120I GGNCC 4 cut(s) 43, 44, 812, 921
BmiI GGNNCC 4 cut(s) 45, 280, 388, 506
BmrFI CCNGG 2 cut(s) 686, 1038
BpiI GAAGAC 2 cut(s) 302, 528
BpuMI CCSGG 2 cut(s) 686, 1038
Bsa29I ATCGAT 1 cut(s) 890
BsaAI YACGTR 1 cut(s) 832
BsaBI GATNNNNATC 1 cut(s) 890
BsaHI GRCGYC 9 cut(s) 233, 248, 304, 366, 459, 474, 530, 618, 726
BsaJI CCNNGG 3 cut(s) 345, 571, 684
BsaXI ACNNNNNCTCC 8 cut(s) 410, 440, 587, 617, 665, 695, 740, 770
Bse118I RCCGGY 1 cut(s) 809
Bse1I ACTGG 1 cut(s) 706
Bse3DI GCAATG 1 cut(s) 819
Bse8I GATNNNNATC 1 cut(s) 890
BseCI ATCGAT 1 cut(s) 890
BseDI CCNNGG 3 cut(s) 345, 571, 684
BseGI GGATG 1 cut(s) 24
BseJI GATNNNNATC 1 cut(s) 890
BseMI GCAATG 1 cut(s) 819
BseMII CTCAG 1 cut(s) 1047
BseNI ACTGG 1 cut(s) 706
BsePI GCGCGC 1 cut(s) 948
BseRI GAGGAG 1 cut(s) 418
BseSI GKGCMC 1 cut(s) 47
BseX3I CGGCCG 2 cut(s) 191, 202
BseXI GCAGC 1 cut(s) 773
BseYI CCCAGC 1 cut(s) 146
Bsh1236I CGCG 2 cut(s) 852, 950
Bsh1285I CGRYCG 2 cut(s) 194, 205
BshFI GGCC 5 cut(s) 45, 193, 204, 720, 813
BshNI GGYRCC 1 cut(s) 386
BshVI ATCGAT 1 cut(s) 890
BsiEI CGRYCG 2 cut(s) 194, 205
BsiHKAI GWGCWC 1 cut(s) 693
BsiHKCI CYCGRG 1 cut(s) 941
BsiSI CCGG 7 cut(s) 172, 194, 205, 686, 798, 810, 1038
BslFI GGGAC 4 cut(s) 71, 164, 277, 503
BsmAI GTCTC 4 cut(s) 407, 667, 795, 1046
BsmBI CGTCTC 1 cut(s) 407
BsmFI GGGAC 4 cut(s) 71, 164, 277, 503
BsnI GGCC 5 cut(s) 45, 193, 204, 720, 813
BsoBI CYCGRG 1 cut(s) 941
Bsp120I GGGCCC 1 cut(s) 43
Bsp1286I GDGCHC 2 cut(s) 47, 693
Bsp143I GATC 3 cut(s) 28, 891, 933
BspANI GGCC 5 cut(s) 45, 193, 204, 720, 813
BspCNI CTCAG 1 cut(s) 1048
BspDI ATCGAT 1 cut(s) 890
BspFNI CGCG 2 cut(s) 852, 950
BspHI TCATGA 1 cut(s) 405
BspLI GGNNCC 4 cut(s) 45, 280, 388, 506
BspPI GGATC 2 cut(s) 886, 928
BspT107I GGYRCC 1 cut(s) 386
BsrBI CCGCTC 1 cut(s) 371
BsrDI GCAATG 1 cut(s) 819
BsrFI RCCGGY 1 cut(s) 809
BsrI ACTGG 1 cut(s) 706
BssAI RCCGGY 1 cut(s) 809
BssECI CCNNGG 3 cut(s) 345, 571, 684
BssHII GCGCGC 1 cut(s) 948
BssMI GATC 3 cut(s) 28, 891, 933
BssNI GRCGYC 9 cut(s) 233, 248, 304, 366, 459, 474, 530, 618, 726
Bst4CI ACNGT 6 cut(s) 25, 88, 155, 255, 481, 900
BstACI GRCGYC 9 cut(s) 233, 248, 304, 366, 459, 474, 530, 618, 726
BstBAI YACGTR 1 cut(s) 832
BstC8I GCNNGC 7 cut(s) 43, 373, 811, 843, 847, 854, 950
BstDEI CTNAG 1 cut(s) 1056
BstDSI CCRYGG 2 cut(s) 345, 571
BstEII GGTNACC 1 cut(s) 964
BstENI CCTNNNNNAGG 1 cut(s) 941
BstF5I GGATG 1 cut(s) 24
BstFNI CGCG 2 cut(s) 852, 950
BstH2I RGCGCY 1 cut(s) 810
BstHHI GCGC 4 cut(s) 9, 809, 950, 952
BstKTI GATC 3 cut(s) 31, 894, 936
BstMAI GTCTC 4 cut(s) 407, 667, 795, 1046
BstMBI GATC 3 cut(s) 28, 891, 933
BstMCI CGRYCG 2 cut(s) 194, 205
BstMWI GCNNNNNNNGC 6 cut(s) 76, 143, 585, 702, 786, 842
BstPI GGTNACC 1 cut(s) 964
BstSCI CCNGG 2 cut(s) 684, 1036
BstSLI GKGCMC 1 cut(s) 47
BstUI CGCG 2 cut(s) 852, 950
BstV1I GCAGC 1 cut(s) 773
BstV2I GAAGAC 2 cut(s) 302, 528
BstX2I RGATCY 1 cut(s) 933
BstYI RGATCY 1 cut(s) 933
BstZI CGGCCG 2 cut(s) 191, 202
Bsu15I ATCGAT 1 cut(s) 890
BsuRI GGCC 5 cut(s) 45, 193, 204, 720, 813
BsuTUI ATCGAT 1 cut(s) 890
BtgI CCRYGG 2 cut(s) 345, 571
BtgZI GCGATG 1 cut(s) 87
BtsCI GGATG 1 cut(s) 24
Cac8I GCNNGC 7 cut(s) 43, 373, 811, 843, 847, 854, 950
CciI TCATGA 1 cut(s) 405
CfoI GCGC 4 cut(s) 9, 809, 950, 952
Cfr10I RCCGGY 1 cut(s) 809
Cfr13I GGNCC 4 cut(s) 43, 44, 812, 921
ClaI ATCGAT 1 cut(s) 890
CpoI CGGWCCG 1 cut(s) 921
CseI GACGC 3 cut(s) 222, 374, 448
Csp6I GTAC 1 cut(s) 709
CspI CGGWCCG 1 cut(s) 921
CviAII CATG 2 cut(s) 10, 406
CviQI GTAC 1 cut(s) 709
DdeI CTNAG 1 cut(s) 1056
DpnI GATC 3 cut(s) 30, 893, 935
DpnII GATC 3 cut(s) 28, 891, 933
DraIII CACNNNGTG 1 cut(s) 832
DrdI GACNNNNNNGTC 2 cut(s) 253, 479
DseDI GACNNNNNNGTC 2 cut(s) 253, 479
EaeI YGGCCR 2 cut(s) 191, 202
EagI CGGCCG 2 cut(s) 191, 202
EciI GGCGGA 1 cut(s) 421
EclXI CGGCCG 2 cut(s) 191, 202
Eco24I GRGCYC 1 cut(s) 47
Eco32I GATATC 1 cut(s) 888
Eco47I GGWCC 1 cut(s) 921
Eco52I CGGCCG 2 cut(s) 191, 202
Eco57I CTGAAG 1 cut(s) 568
Eco72I CACGTG 1 cut(s) 832
Eco88I CYCGRG 1 cut(s) 941
Eco91I GGTNACC 1 cut(s) 964
EcoNI CCTNNNNNAGG 1 cut(s) 941
EcoO65I GGTNACC 1 cut(s) 964
EcoRV GATATC 1 cut(s) 888
EcoT38I GRGCYC 1 cut(s) 47
Esp3I CGTCTC 1 cut(s) 407
FaeI CATG 2 cut(s) 13, 409
FaiI YATR 3 cut(s) 11, 407, 424
FalI AAGNNNNNCTT 2 cut(s) 980, 1012
FaqI GGGAC 4 cut(s) 71, 164, 277, 503
FatI CATG 2 cut(s) 9, 405
FauI CCCGC 8 cut(s) 34, 220, 274, 324, 500, 550, 658, 791
FblI GTMKAC 2 cut(s) 257, 483
Fnu4HI GCNGC 9 cut(s) 351, 354, 369, 577, 580, 787, 850, 910, 953
FokI GGATG 1 cut(s) 31
FriOI GRGCYC 1 cut(s) 47
Fsp4HI GCNGC 9 cut(s) 351, 354, 369, 577, 580, 787, 850, 910, 953
FspBI CTAG 1 cut(s) 80
FspI TGCGCA 1 cut(s) 8
GlaI GCGC 4 cut(s) 8, 808, 949, 951
GluI GCNGC 9 cut(s) 351, 354, 369, 577, 580, 787, 850, 910, 953
GsaI CCCAGC 1 cut(s) 150
HaeII RGCGCY 1 cut(s) 810
HaeIII GGCC 5 cut(s) 45, 193, 204, 720, 813
HapII CCGG 7 cut(s) 172, 194, 205, 686, 798, 810, 1038
HgaI GACGC 3 cut(s) 222, 374, 448
HhaI GCGC 4 cut(s) 9, 809, 950, 952
Hin1I GRCGYC 9 cut(s) 233, 248, 304, 366, 459, 474, 530, 618, 726
Hin1II CATG 2 cut(s) 13, 409
Hin6I GCGC 4 cut(s) 7, 807, 948, 950
HinP1I GCGC 4 cut(s) 7, 807, 948, 950
HincII GTYRAC 3 cut(s) 258, 484, 670
HindII GTYRAC 3 cut(s) 258, 484, 670
HinfI GANTC 5 cut(s) 219, 602, 755, 926, 1013
HpaII CCGG 7 cut(s) 172, 194, 205, 686, 798, 810, 1038
HphI GGTGA 6 cut(s) 118, 228, 243, 454, 469, 976
Hpy166II GTNNAC 3 cut(s) 258, 484, 670
Hpy188I TCNGA 4 cut(s) 119, 246, 472, 931
Hpy188III TCNNGA 2 cut(s) 406, 868
Hpy8I GTNNAC 3 cut(s) 258, 484, 670
HpyAV CCTTC 3 cut(s) 31, 103, 982
HpyCH4III ACNGT 6 cut(s) 25, 88, 155, 255, 481, 900
HpyCH4IV ACGT 7 cut(s) 248, 304, 474, 530, 618, 726, 831
HpyCH4V TGCA 1 cut(s) 841
HpyF10VI GCNNNNNNNGC 6 cut(s) 76, 143, 585, 702, 786, 842
HpyF3I CTNAG 1 cut(s) 1056
HpySE526I ACGT 7 cut(s) 248, 304, 474, 530, 618, 726, 831
Hsp92I GRCGYC 9 cut(s) 233, 248, 304, 366, 459, 474, 530, 618, 726
Hsp92II CATG 2 cut(s) 13, 409
HspAI GCGC 4 cut(s) 7, 807, 948, 950
KroI GCCGGC 1 cut(s) 809
KroNI GCCGGC 1 cut(s) 811
Kzo9I GATC 3 cut(s) 28, 891, 933
LmnI GCTCC 3 cut(s) 431, 688, 785
Lsp1109I GCAGC 1 cut(s) 773
MaeI CTAG 1 cut(s) 80
MaeII ACGT 7 cut(s) 248, 304, 474, 530, 618, 726, 831
MaeIII GTNAC 7 cut(s) 82, 97, 234, 249, 460, 475, 964
MalI GATC 3 cut(s) 30, 893, 935
MbiI CCGCTC 1 cut(s) 371
MboI GATC 3 cut(s) 28, 891, 933
MboII GAAGA 7 cut(s) 279, 302, 333, 505, 528, 559, 895
MflI RGATCY 1 cut(s) 933
MhlI GDGCHC 2 cut(s) 47, 693
MluCI AATT 2 cut(s) 632, 734
MlyI GAGTC 4 cut(s) 213, 596, 749, 935
MmeI TCCRAC 3 cut(s) 97, 269, 919
MroNI GCCGGC 1 cut(s) 809
MroXI GAANNNNTTC 1 cut(s) 992
MseI TTAA 1 cut(s) 359
MspA1I CMGCKG 3 cut(s) 215, 786, 955
MspI CCGG 7 cut(s) 172, 194, 205, 686, 798, 810, 1038
MspR9I CCNGG 2 cut(s) 686, 1038
MvnI CGCG 2 cut(s) 852, 950
MwoI GCNNNNNNNGC 6 cut(s) 76, 143, 585, 702, 786, 842
NaeI GCCGGC 1 cut(s) 811
NciI CCSGG 2 cut(s) 686, 1038
NdeII GATC 3 cut(s) 28, 891, 933
NgoMIV GCCGGC 1 cut(s) 809
NlaIII CATG 2 cut(s) 13, 409
NlaIV GGNNCC 4 cut(s) 45, 280, 388, 506
NmuCI GTSAC 7 cut(s) 82, 97, 234, 249, 460, 475, 964
NsbI TGCGCA 1 cut(s) 8
PaeR7I CTCGAG 1 cut(s) 941
PagI TCATGA 1 cut(s) 405
PalAI GGCGCGCC 1 cut(s) 948
PauI GCGCGC 1 cut(s) 948
PcsI WCGNNNNNNNCGW 7 cut(s) 254, 480, 615, 663, 720, 723, 896
PdiI GCCGGC 1 cut(s) 811
PdmI GAANNNNTTC 1 cut(s) 992
PfeI GAWTC 1 cut(s) 1013
PflFI GACNNNGTC 4 cut(s) 306, 532, 620, 925
PflMI CCANNNNNTGG 1 cut(s) 832
PkrI GCNGC 9 cut(s) 352, 355, 370, 578, 581, 788, 851, 911, 954
PleI GAGTC 4 cut(s) 213, 596, 749, 934
PmaCI CACGTG 1 cut(s) 832
PmlI CACGTG 1 cut(s) 832
PpsI GAGTC 4 cut(s) 213, 596, 749, 934
Ppu21I YACGTR 1 cut(s) 832
PspCI CACGTG 1 cut(s) 832
PspEI GGTNACC 1 cut(s) 964
PspFI CCCAGC 1 cut(s) 146
PspN4I GGNNCC 4 cut(s) 45, 280, 388, 506
PspOMI GGGCCC 1 cut(s) 43
PspPI GGNCC 4 cut(s) 43, 44, 812, 921
PspXI VCTCGAGB 1 cut(s) 941
PsuI RGATCY 1 cut(s) 933
PsyI GACNNNGTC 4 cut(s) 306, 532, 620, 925
PteI GCGCGC 1 cut(s) 948
RsaI GTAC 1 cut(s) 710
RsaNI GTAC 1 cut(s) 709
Rsr2I CGGWCCG 1 cut(s) 921
RsrII CGGWCCG 1 cut(s) 921
SalI GTCGAC 2 cut(s) 256, 482
SaqAI TTAA 1 cut(s) 359
SatI GCNGC 9 cut(s) 351, 354, 369, 577, 580, 787, 850, 910, 953
Sau3AI GATC 3 cut(s) 28, 891, 933
Sau96I GGNCC 4 cut(s) 43, 44, 812, 921
SchI GAGTC 4 cut(s) 213, 596, 749, 935
ScrFI CCNGG 2 cut(s) 686, 1038
SduI GDGCHC 2 cut(s) 47, 693
Sfr274I CTCGAG 1 cut(s) 941
SgsI GGCGCGCC 1 cut(s) 948
SinI GGWCC 1 cut(s) 921
SlaI CTCGAG 1 cut(s) 941
SmlI CTYRAG 1 cut(s) 941
SmoI CTYRAG 1 cut(s) 941
Sse9I AATT 2 cut(s) 632, 734
SspMI CTAG 1 cut(s) 80
StyD4I CCNGG 2 cut(s) 684, 1036
TaaI ACNGT 6 cut(s) 25, 88, 155, 255, 481, 900
TaiI ACGT 7 cut(s) 251, 307, 477, 533, 621, 729, 834
TaqI TCGA 9 cut(s) 27, 51, 257, 417, 483, 723, 741, 890, 942
TaqII GACCGA 1 cut(s) 938
TasI AATT 2 cut(s) 632, 734
TauI GCSGC 8 cut(s) 353, 356, 371, 579, 582, 852, 912, 955
TfiI GAWTC 1 cut(s) 1013
Tru1I TTAA 1 cut(s) 359
Tru9I TTAA 1 cut(s) 359
TseFI GTSAC 7 cut(s) 82, 97, 234, 249, 460, 475, 964
TseI GCWGC 1 cut(s) 786
Tsp45I GTSAC 7 cut(s) 82, 97, 234, 249, 460, 475, 964
TspGWI ACGGA 3 cut(s) 377, 655, 934
Tth111I GACNNNGTC 4 cut(s) 306, 532, 620, 925
Van91I CCANNNNNTGG 1 cut(s) 832
VpaK11BI GGWCC 1 cut(s) 921
XagI CCTNNNNNAGG 1 cut(s) 941
XapI RAATTY 2 cut(s) 632, 734
XcmI CCANNNNNNNNNTGG 1 cut(s) 1037
XhoI CTCGAG 1 cut(s) 941
XmiI GTMKAC 2 cut(s) 257, 483
XmnI GAANNNNTTC 1 cut(s) 992
XspI CTAG 1 cut(s) 80
ZraI GACGTC 6 cut(s) 249, 305, 475, 531, 619, 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.