Rmu_sc0003785.1_g000007
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003785.1
N/A
Physical Location & Seq
Reverse (-)
27567 .. 31171
3605 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003785.1_g000007.1.cds

Sequence Viewer

Length: 1239 bp
atggtggcggcggcgccggcactgtgggcggcggtagcggcggctaggggaggcaatgttgcgagctacggtttttgggtagtccattttagaggtgactctgccgaatttttggtagagttatccctaaggtgggccccacagggccacctcggatttcaggcctactttagtgattctcaatgccaagccacaaaggatgctggtgttattgccgggatgaatgttatgtggctcatcaatgagcctacagccgctgcaattgcatatggcttggacaaaaaggacagcactcttggtgggaagaatgttcttgttatcgatctaggtggtggtactttcgatgtgttccttctcaaaattgaagagggaatttttgaggtgaaatctactactggagatacctaccttgggggagaagatttcgacaatagaatggtcaactatcttgtacaagagtttgagaggaagcaccaaactgatatttgcaataaccccaaagcattgagaaggttgagaacatcttgtgagagagcaaagagacttctttcttcaactgctcaaaccaccattgagatcgattctttatgtgatggtattgattttgtttctaaaataaccagagcaaaatttgaggagctcaacctggatctttttacaaagtgtttggagtctgtcaaaaagtgtttgactgatgctcaaatggataagagcattgttgatgatgttgttcttgttggtgaatctactagaattccaaaggtacaagaagtaatacaggacttctttaacggtaaggagctttgtaagagcatcaatcctgatgaagtagttgcatatggcgaggccatacaagctacaattttgagcggttccattgagaaggttcaagacttgcccttattggatgtcactcttctttcccttggttatgagcgtgatgcaggacatatggctattgtcatcccaagaaacactaccattcccaccaaaaaagtaaagattagcacaaccgtctgtaatcatcagaaagaagtattgactaagataacacatgcataccacgaattgctgagtgctgacagtaataaaattcaaatgaaggcttcaatgaggacagtggttcaccttatcttaatattctttggtcctcaaaagctctggaaggacgggctgagcaaagaggccaagagagaaggaagcaagttcctgtccgataggattagccctttctgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

412

Amino Acids

45.54

Weight (kDa)

6.12

Isoelectric Point (pI)

29.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 13
AccBSI CCGCTC 1 cut(s) 870
AciI CCGC 8 cut(s) 8, 11, 29, 32, 38, 41, 255, 870
AclWI GGATC 1 cut(s) 657
AcsI RAATTY 5 cut(s) 107, 372, 629, 753, 1092
AcyI GRCGYC 1 cut(s) 14
AfaI GTAC 3 cut(s) 337, 453, 765
AfiI CCNNNNNNNGG 3 cut(s) 132, 133, 411
AgsI TTSAA 5 cut(s) 365, 555, 890, 1097, 1110
AjnI CCWGG 1 cut(s) 645
AluBI AGCT 5 cut(s) 66, 640, 802, 857, 1159
AluI AGCT 5 cut(s) 66, 640, 802, 857, 1159
Alw21I GWGCWC 1 cut(s) 642
Alw26I GTCTC 1 cut(s) 535
AlwI GGATC 1 cut(s) 657
AlwNI CAGNNNCTG 1 cut(s) 257
AoxI GGCC 5 cut(s) 135, 145, 162, 846, 1185
ApaI GGGCCC 1 cut(s) 139
ApeKI GCWGC 1 cut(s) 257
ApoI RAATTY 5 cut(s) 107, 372, 629, 753, 1092
AspLEI GCGC 1 cut(s) 16
AspS9I GGNCC 4 cut(s) 135, 136, 145, 1148
AsuC2I CCSGG 1 cut(s) 217
AsuHPI GGTGA 4 cut(s) 107, 394, 752, 1118
AvaII GGWCC 1 cut(s) 1148
AxyI CCTNAGG 1 cut(s) 128
BaeGI GKGCMC 1 cut(s) 139
BanI GGYRCC 1 cut(s) 13
BanII GRGCYC 2 cut(s) 139, 642
Bbv12I GWGCWC 1 cut(s) 642
BbvI GCAGC 1 cut(s) 244
BccI CCATC 1 cut(s) 587
BciT130I CCWGG 1 cut(s) 647
BcnI CCSGG 1 cut(s) 217
BcoDI GTCTC 1 cut(s) 535
BfaI CTAG 4 cut(s) 45, 326, 750, 1237
BfmI CTRYAG 1 cut(s) 249
BfoI RGCGCY 1 cut(s) 17
BisI GCNGC 7 cut(s) 9, 12, 30, 39, 42, 255, 258
BlpI GCTNAGC 1 cut(s) 1175
BlsI GCNGC 7 cut(s) 10, 13, 31, 40, 43, 256, 259
Bme1390I CCNGG 2 cut(s) 217, 647
Bme18I GGWCC 1 cut(s) 1148
BmgT120I GGNCC 4 cut(s) 135, 136, 145, 1148
BmiI GGNNCC 4 cut(s) 15, 137, 138, 874
BmrFI CCNGG 2 cut(s) 217, 647
BmsI GCATC 4 cut(s) 190, 685, 822, 931
BpmI CTGGAG 1 cut(s) 417
Bpu1102I GCTNAGC 1 cut(s) 1175
BpuMI CCSGG 1 cut(s) 217
Bsa29I ATCGAT 2 cut(s) 321, 579
BsaHI GRCGYC 1 cut(s) 14
BsaJI CCNNGG 3 cut(s) 151, 409, 925
BsaXI ACNNNNNCTCC 2 cut(s) 42, 72
Bsc4I CCNNNNNNNGG 3 cut(s) 132, 133, 411
Bse118I RCCGGY 1 cut(s) 16
Bse1I ACTGG 1 cut(s) 400
Bse21I CCTNAGG 1 cut(s) 128
Bse3DI GCAATG 1 cut(s) 61
BseBI CCWGG 1 cut(s) 647
BseCI ATCGAT 2 cut(s) 321, 579
BseDI CCNNGG 3 cut(s) 151, 409, 925
BseGI GGATG 4 cut(s) 205, 225, 913, 963
BseLI CCNNNNNNNGG 3 cut(s) 132, 133, 411
BseMI GCAATG 1 cut(s) 61
BseMII CTCAG 2 cut(s) 1064, 1166
BseNI ACTGG 1 cut(s) 400
BseRI GAGGAG 1 cut(s) 650
BseSI GKGCMC 1 cut(s) 139
BseXI GCAGC 1 cut(s) 244
BshFI GGCC 5 cut(s) 137, 147, 164, 848, 1187
BshNI GGYRCC 1 cut(s) 13
BshVI ATCGAT 2 cut(s) 321, 579
BsiHKAI GWGCWC 1 cut(s) 642
BsiSI CCGG 2 cut(s) 17, 216
BslI CCNNNNNNNGG 3 cut(s) 132, 133, 411
BsmAI GTCTC 1 cut(s) 535
BsnI GGCC 5 cut(s) 137, 147, 164, 848, 1187
Bsp120I GGGCCC 1 cut(s) 135
Bsp1286I GDGCHC 2 cut(s) 139, 642
Bsp1407I TGTACA 1 cut(s) 451
Bsp143I GATC 3 cut(s) 322, 576, 649
Bsp1720I GCTNAGC 1 cut(s) 1175
BspACI CCGC 8 cut(s) 8, 11, 29, 32, 38, 41, 255, 870
BspANI GGCC 5 cut(s) 137, 147, 164, 848, 1187
BspCNI CTCAG 2 cut(s) 1065, 1167
BspDI ATCGAT 2 cut(s) 321, 579
BspLI GGNNCC 4 cut(s) 15, 137, 138, 874
BspPI GGATC 1 cut(s) 657
BspT107I GGYRCC 1 cut(s) 13
BsrBI CCGCTC 1 cut(s) 870
BsrDI GCAATG 1 cut(s) 61
BsrFI RCCGGY 1 cut(s) 16
BsrGI TGTACA 1 cut(s) 451
BsrI ACTGG 1 cut(s) 400
BssAI RCCGGY 1 cut(s) 16
BssECI CCNNGG 3 cut(s) 151, 409, 925
BssMI GATC 3 cut(s) 322, 576, 649
BssNI GRCGYC 1 cut(s) 14
BssT1I CCWWGG 2 cut(s) 409, 925
Bst2UI CCWGG 1 cut(s) 647
Bst4CI ACNGT 6 cut(s) 24, 71, 794, 1015, 1085, 1120
Bst6I CTCTTC 2 cut(s) 360, 921
BstACI GRCGYC 1 cut(s) 14
BstAUI TGTACA 1 cut(s) 451
BstC8I GCNNGC 2 cut(s) 18, 64
BstDEI CTNAG 4 cut(s) 128, 1044, 1073, 1175
BstF5I GGATG 4 cut(s) 205, 225, 913, 963
BstH2I RGCGCY 1 cut(s) 17
BstHHI GCGC 1 cut(s) 16
BstKTI GATC 3 cut(s) 325, 579, 652
BstMAI GTCTC 1 cut(s) 535
BstMBI GATC 3 cut(s) 322, 576, 649
BstMWI GCNNNNNNNGC 7 cut(s) 17, 26, 35, 38, 263, 854, 1233
BstNI CCWGG 1 cut(s) 647
BstNSI RCATGY 1 cut(s) 1058
BstSCI CCNGG 2 cut(s) 215, 645
BstSFI CTRYAG 1 cut(s) 249
BstSLI GKGCMC 1 cut(s) 139
BstV1I GCAGC 1 cut(s) 244
BstX2I RGATCY 1 cut(s) 649
BstYI RGATCY 1 cut(s) 649
Bsu15I ATCGAT 2 cut(s) 321, 579
Bsu36I CCTNAGG 1 cut(s) 128
BsuRI GGCC 5 cut(s) 137, 147, 164, 848, 1187
BsuTUI ATCGAT 2 cut(s) 321, 579
BtsCI GGATG 4 cut(s) 205, 225, 913, 963
BtsIMutI CAGTG 2 cut(s) 20, 1125
Cac8I GCNNGC 2 cut(s) 18, 64
CaiI CAGNNNCTG 1 cut(s) 257
CfoI GCGC 1 cut(s) 16
Cfr10I RCCGGY 1 cut(s) 16
Cfr13I GGNCC 4 cut(s) 135, 136, 145, 1148
ClaI ATCGAT 2 cut(s) 321, 579
Csp6I GTAC 3 cut(s) 336, 452, 764
CviAII CATG 1 cut(s) 1055
CviQI GTAC 3 cut(s) 336, 452, 764
DdeI CTNAG 4 cut(s) 128, 1044, 1073, 1175
DinI GGCGCC 1 cut(s) 15
DpnI GATC 3 cut(s) 324, 578, 651
DpnII GATC 3 cut(s) 322, 576, 649
Eam1104I CTCTTC 2 cut(s) 360, 921
EarI CTCTTC 2 cut(s) 360, 921
Ecl136II GAGCTC 1 cut(s) 640
Eco130I CCWWGG 2 cut(s) 409, 925
Eco147I AGGCCT 1 cut(s) 164
Eco24I GRGCYC 2 cut(s) 139, 642
Eco47I GGWCC 1 cut(s) 1148
Eco53kI GAGCTC 1 cut(s) 640
Eco81I CCTNAGG 1 cut(s) 128
EcoICRI GAGCTC 1 cut(s) 640
EcoO109I RGGNCCY 1 cut(s) 136
EcoRI GAATTC 1 cut(s) 753
EcoRII CCWGG 1 cut(s) 645
EcoT14I CCWWGG 2 cut(s) 409, 925
EcoT22I ATGCAT 1 cut(s) 1060
EcoT38I GRGCYC 2 cut(s) 139, 642
EgeI GGCGCC 1 cut(s) 15
EheI GGCGCC 1 cut(s) 15
ErhI CCWWGG 2 cut(s) 409, 925
FaeI CATG 1 cut(s) 1058
FatI CATG 1 cut(s) 1054
FauNDI CATATG 3 cut(s) 268, 838, 951
Fnu4HI GCNGC 7 cut(s) 9, 12, 30, 39, 42, 255, 258
FokI GGATG 4 cut(s) 212, 232, 920, 950
FriOI GRGCYC 2 cut(s) 139, 642
Fsp4HI GCNGC 7 cut(s) 9, 12, 30, 39, 42, 255, 258
FspBI CTAG 4 cut(s) 45, 326, 750, 1237
GlaI GCGC 1 cut(s) 15
GluI GCNGC 7 cut(s) 9, 12, 30, 39, 42, 255, 258
GsuI CTGGAG 1 cut(s) 417
HaeII RGCGCY 1 cut(s) 17
HaeIII GGCC 5 cut(s) 137, 147, 164, 848, 1187
HapII CCGG 2 cut(s) 17, 216
HhaI GCGC 1 cut(s) 16
Hin1I GRCGYC 1 cut(s) 14
Hin1II CATG 1 cut(s) 1058
Hin6I GCGC 1 cut(s) 14
HinP1I GCGC 1 cut(s) 14
HincII GTYRAC 1 cut(s) 442
HindII GTYRAC 1 cut(s) 442
HinfI GANTC 5 cut(s) 98, 176, 581, 671, 743
HpaII CCGG 2 cut(s) 17, 216
HphI GGTGA 4 cut(s) 107, 394, 752, 1118
Hpy166II GTNNAC 2 cut(s) 442, 1126
Hpy188I TCNGA 3 cut(s) 155, 1029, 1216
Hpy188III TCNNGA 3 cut(s) 821, 890, 1162
Hpy8I GTNNAC 2 cut(s) 442, 1126
HpyAV CCTTC 6 cut(s) 362, 504, 877, 1096, 1159, 1190
HpyCH4III ACNGT 6 cut(s) 24, 71, 794, 1015, 1085, 1120
HpyCH4V TGCA 6 cut(s) 260, 266, 489, 836, 944, 1058
HpyF10VI GCNNNNNNNGC 7 cut(s) 17, 26, 35, 38, 263, 854, 1233
HpyF3I CTNAG 4 cut(s) 128, 1044, 1073, 1175
Hsp92I GRCGYC 1 cut(s) 14
Hsp92II CATG 1 cut(s) 1058
HspAI GCGC 1 cut(s) 14
KasI GGCGCC 1 cut(s) 13
KroI GCCGGC 1 cut(s) 16
KroNI GCCGGC 1 cut(s) 18
Kzo9I GATC 3 cut(s) 322, 576, 649
LmnI GCTCC 2 cut(s) 637, 799
Lsp1109I GCAGC 1 cut(s) 244
LweI GCATC 4 cut(s) 190, 685, 822, 931
MaeI CTAG 4 cut(s) 45, 326, 750, 1237
MaeIII GTNAC 2 cut(s) 95, 910
MalI GATC 3 cut(s) 324, 578, 651
MbiI CCGCTC 1 cut(s) 870
MboI GATC 3 cut(s) 322, 576, 649
MboII GAAGA 5 cut(s) 316, 377, 431, 543, 908
MfeI CAATTG 1 cut(s) 261
MflI RGATCY 1 cut(s) 649
MhlI GDGCHC 2 cut(s) 139, 642
MluCI AATT 9 cut(s) 107, 261, 360, 372, 629, 753, 861, 1067, 1092
Mly113I GGCGCC 1 cut(s) 14
MlyI GAGTC 2 cut(s) 92, 680
Mph1103I ATGCAT 1 cut(s) 1060
MroNI GCCGGC 1 cut(s) 16
MseI TTAA 2 cut(s) 789, 1136
MspA1I CMGCKG 1 cut(s) 257
MspI CCGG 2 cut(s) 17, 216
MspR9I CCNGG 2 cut(s) 217, 647
MunI CAATTG 1 cut(s) 261
MvaI CCWGG 1 cut(s) 647
MwoI GCNNNNNNNGC 7 cut(s) 17, 26, 35, 38, 263, 854, 1233
NaeI GCCGGC 1 cut(s) 18
NarI GGCGCC 1 cut(s) 14
NciI CCSGG 1 cut(s) 217
NdeI CATATG 3 cut(s) 268, 838, 951
NdeII GATC 3 cut(s) 322, 576, 649
NgoMIV GCCGGC 1 cut(s) 16
NlaIII CATG 1 cut(s) 1058
NlaIV GGNNCC 4 cut(s) 15, 137, 138, 874
NmuCI GTSAC 2 cut(s) 95, 910
NsiI ATGCAT 1 cut(s) 1060
NspI RCATGY 1 cut(s) 1058
PceI AGGCCT 1 cut(s) 164
PdiI GCCGGC 1 cut(s) 18
PfeI GAWTC 3 cut(s) 176, 581, 743
PkrI GCNGC 7 cut(s) 10, 13, 31, 40, 43, 256, 259
PleI GAGTC 2 cut(s) 92, 679
PluTI GGCGCC 1 cut(s) 17
PpsI GAGTC 2 cut(s) 92, 679
Psp124BI GAGCTC 1 cut(s) 642
Psp6I CCWGG 1 cut(s) 645
PspGI CCWGG 1 cut(s) 645
PspN4I GGNNCC 4 cut(s) 15, 137, 138, 874
PspOMI GGGCCC 1 cut(s) 135
PspPI GGNCC 4 cut(s) 135, 136, 145, 1148
PstNI CAGNNNCTG 1 cut(s) 257
PsuI RGATCY 1 cut(s) 649
RsaI GTAC 3 cut(s) 337, 453, 765
RsaNI GTAC 3 cut(s) 336, 452, 764
SacI GAGCTC 1 cut(s) 642
SaqAI TTAA 2 cut(s) 789, 1136
SatI GCNGC 7 cut(s) 9, 12, 30, 39, 42, 255, 258
Sau3AI GATC 3 cut(s) 322, 576, 649
Sau96I GGNCC 4 cut(s) 135, 136, 145, 1148
SchI GAGTC 2 cut(s) 92, 680
ScrFI CCNGG 2 cut(s) 217, 647
SduI GDGCHC 2 cut(s) 139, 642
SfaNI GCATC 4 cut(s) 190, 685, 822, 931
SfcI CTRYAG 1 cut(s) 249
SfoI GGCGCC 1 cut(s) 15
SinI GGWCC 1 cut(s) 1148
Sse9I AATT 9 cut(s) 107, 261, 360, 372, 629, 753, 861, 1067, 1092
SseBI AGGCCT 1 cut(s) 164
SsiI CCGC 8 cut(s) 8, 11, 29, 32, 38, 41, 255, 870
SspDI GGCGCC 1 cut(s) 13
SspI AATATT 1 cut(s) 1140
SspMI CTAG 4 cut(s) 45, 326, 750, 1237
SstI GAGCTC 1 cut(s) 642
StuI AGGCCT 1 cut(s) 164
StyD4I CCNGG 2 cut(s) 215, 645
StyI CCWWGG 2 cut(s) 409, 925
TaaI ACNGT 6 cut(s) 24, 71, 794, 1015, 1085, 1120
TaqI TCGA 4 cut(s) 321, 342, 426, 579
TasI AATT 9 cut(s) 107, 261, 360, 372, 629, 753, 861, 1067, 1092
TatI WGTACW 1 cut(s) 451
TauI GCSGC 6 cut(s) 11, 14, 32, 41, 44, 257
TfiI GAWTC 3 cut(s) 176, 581, 743
Tru1I TTAA 2 cut(s) 789, 1136
Tru9I TTAA 2 cut(s) 789, 1136
TscAI CASTG 2 cut(s) 27, 1125
TseFI GTSAC 2 cut(s) 95, 910
TseI GCWGC 1 cut(s) 257
Tsp45I GTSAC 2 cut(s) 95, 910
TspDTI ATGAA 3 cut(s) 236, 840, 1115
TspRI CASTG 2 cut(s) 27, 1125
VpaK11BI GGWCC 1 cut(s) 1148
XapI RAATTY 5 cut(s) 107, 372, 629, 753, 1092
XceI RCATGY 1 cut(s) 1058
XspI CTAG 4 cut(s) 45, 326, 750, 1237
Zsp2I ATGCAT 1 cut(s) 1060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.