Rmu_sc0003786.1_g000005

Microsomal glutathione S-transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003786.1
N/A
Physical Location & Seq
Reverse (-)
31257 .. 36352
5096 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 588 bp
atgggttcttcttcagttgtggaattgcttcctaaagattacgggtatgtggttctggtggctgtcctctacagctttctgaatttcttcatggcggccaaagtgggcaaggccaggaagaagtacaaggtgttttacccgaccatgtatgcatcggagtccgacaacaaagacgccaaggtgttcaactgtgttcagagaggtcaccagaactcccttgaaatgatgcctttgttctttgtcttcctccttttgggtggtctcaggcatccttgcatctccgccgccctcggattgctctataccgtttctcgctatttctatttcaaaggctactccaccggcgacccccaaaagcgtctccctatcggagtacaagaccttgcggcccttcgtgatggagccttggaacgagtggaggtgtatgagcatggtttagcaactcttccaataattacagtggcaacactagggcaaatggtggttgttgtgaatgaaatccgaccattaggctttggtggtcagattaggatccatgacacccccatgacctctgagcttgaaaggcaagaaatccgtgatttatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
MAPEG

Protein Analysis

195

Amino Acids

21.87

Weight (kDa)

8.8

Isoelectric Point (pI)

30.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAPEG PF01124 17 - 125 4.1e-26 MAPEG family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 95, 282, 285, 386
AclWI GGATC 2 cut(s) 526, 539
AcoI YGGCCR 1 cut(s) 96
AcsI RAATTY 1 cut(s) 82
AcyI GRCGYC 1 cut(s) 174
AfaI GTAC 2 cut(s) 125, 375
AfiI CCNNNNNNNGG 1 cut(s) 253
AgsI TTSAA 4 cut(s) 187, 221, 328, 563
AjnI CCWGG 1 cut(s) 113
AluBI AGCT 2 cut(s) 75, 559
AluI AGCT 2 cut(s) 75, 559
Alw26I GTCTC 2 cut(s) 266, 365
AlwI GGATC 2 cut(s) 526, 539
AoxI GGCC 3 cut(s) 96, 111, 387
ApoI RAATTY 1 cut(s) 82
Asp700I GAANNNNTTC 2 cut(s) 27, 86
AspS9I GGNCC 1 cut(s) 388
AsuHPI GGTGA 1 cut(s) 197
BamHI GGATCC 1 cut(s) 531
BbsI GAAGAC 1 cut(s) 235
BccI CCATC 1 cut(s) 392
BciT130I CCWGG 1 cut(s) 115
BcoDI GTCTC 2 cut(s) 266, 365
BfaI CTAG 1 cut(s) 470
BfmI CTRYAG 1 cut(s) 70
BisI GCNGC 3 cut(s) 96, 285, 387
BlsI GCNGC 3 cut(s) 97, 286, 388
Bme1390I CCNGG 1 cut(s) 115
BmgT120I GGNCC 1 cut(s) 388
BmiI GGNNCC 2 cut(s) 403, 533
BmrFI CCNGG 1 cut(s) 115
BmsI GCATC 4 cut(s) 161, 216, 277, 285
BpiI GAAGAC 1 cut(s) 235
BsaBI GATNNNNATC 1 cut(s) 530
BsaHI GRCGYC 1 cut(s) 174
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 3 cut(s) 177, 289, 405
BsaXI ACNNNNNCTCC 2 cut(s) 197, 227
Bsc4I CCNNNNNNNGG 1 cut(s) 253
Bse118I RCCGGY 1 cut(s) 341
Bse8I GATNNNNATC 1 cut(s) 530
BseBI CCWGG 1 cut(s) 115
BseDI CCNNGG 3 cut(s) 177, 289, 405
BseGI GGATG 1 cut(s) 268
BseJI GATNNNNATC 1 cut(s) 530
BseLI CCNNNNNNNGG 1 cut(s) 253
BseMII CTCAG 2 cut(s) 277, 546
BshFI GGCC 3 cut(s) 98, 113, 389
BsiSI CCGG 1 cut(s) 342
BslI CCNNNNNNNGG 1 cut(s) 253
BsmAI GTCTC 2 cut(s) 266, 365
BsmBI CGTCTC 1 cut(s) 365
BsnI GGCC 3 cut(s) 98, 113, 389
Bso31I GGTCTC 1 cut(s) 266
Bsp143I GATC 1 cut(s) 531
BspACI CCGC 4 cut(s) 95, 282, 285, 386
BspANI GGCC 3 cut(s) 98, 113, 389
BspCNI CTCAG 2 cut(s) 276, 547
BspLI GGNNCC 2 cut(s) 403, 533
BspPI GGATC 2 cut(s) 526, 539
BspTNI GGTCTC 1 cut(s) 266
BsrFI RCCGGY 1 cut(s) 341
BssAI RCCGGY 1 cut(s) 341
BssECI CCNNGG 3 cut(s) 177, 289, 405
BssMI GATC 1 cut(s) 531
BssNI GRCGYC 1 cut(s) 174
BssT1I CCWWGG 2 cut(s) 177, 405
Bst2UI CCWGG 1 cut(s) 115
Bst4CI ACNGT 3 cut(s) 191, 307, 460
Bst6I CTCTTC 1 cut(s) 450
BstACI GRCGYC 1 cut(s) 174
BstDEI CTNAG 2 cut(s) 263, 555
BstEII GGTNACC 1 cut(s) 203
BstF5I GGATG 1 cut(s) 268
BstKTI GATC 1 cut(s) 534
BstMAI GTCTC 2 cut(s) 266, 365
BstMBI GATC 1 cut(s) 531
BstMWI GCNNNNNNNGC 1 cut(s) 565
BstNI CCWGG 1 cut(s) 115
BstPI GGTNACC 1 cut(s) 203
BstSCI CCNGG 1 cut(s) 113
BstSFI CTRYAG 1 cut(s) 70
BstV2I GAAGAC 1 cut(s) 235
BstX2I RGATCY 1 cut(s) 531
BstYI RGATCY 1 cut(s) 531
BsuRI GGCC 3 cut(s) 98, 113, 389
BtsCI GGATG 1 cut(s) 268
BtsIMutI CAGTG 1 cut(s) 465
Cfr10I RCCGGY 1 cut(s) 341
Cfr13I GGNCC 1 cut(s) 388
CseI GACGC 2 cut(s) 182, 347
Csp6I GTAC 2 cut(s) 124, 374
CviAII CATG 5 cut(s) 91, 145, 431, 536, 547
CviJI RGCY 9 cut(s) 62, 75, 98, 113, 333, 389, 404, 513, 559
CviKI_1 RGCY 9 cut(s) 62, 75, 98, 113, 333, 389, 404, 513, 559
CviQI GTAC 2 cut(s) 124, 374
DdeI CTNAG 2 cut(s) 263, 555
DpnI GATC 1 cut(s) 533
DpnII GATC 1 cut(s) 531
EaeI YGGCCR 1 cut(s) 96
Eam1104I CTCTTC 1 cut(s) 450
EarI CTCTTC 1 cut(s) 450
EciI GGCGGA 1 cut(s) 271
Eco130I CCWWGG 2 cut(s) 177, 405
Eco31I GGTCTC 1 cut(s) 266
Eco91I GGTNACC 1 cut(s) 203
EcoO65I GGTNACC 1 cut(s) 203
EcoRII CCWGG 1 cut(s) 113
EcoT14I CCWWGG 2 cut(s) 177, 405
EcoT22I ATGCAT 1 cut(s) 154
ErhI CCWWGG 2 cut(s) 177, 405
Esp3I CGTCTC 1 cut(s) 365
FaeI CATG 5 cut(s) 94, 148, 434, 539, 550
FatI CATG 5 cut(s) 90, 144, 430, 535, 546
Fnu4HI GCNGC 3 cut(s) 96, 285, 387
FokI GGATG 1 cut(s) 255
Fsp4HI GCNGC 3 cut(s) 96, 285, 387
FspBI CTAG 1 cut(s) 470
GluI GCNGC 3 cut(s) 96, 285, 387
HaeIII GGCC 3 cut(s) 98, 113, 389
HapII CCGG 1 cut(s) 342
HgaI GACGC 2 cut(s) 182, 347
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 5 cut(s) 94, 148, 434, 539, 550
HinfI GANTC 1 cut(s) 158
HpaII CCGG 1 cut(s) 342
HphI GGTGA 1 cut(s) 197
Hpy188I TCNGA 9 cut(s) 81, 157, 163, 198, 293, 371, 503, 525, 556
Hpy188III TCNNGA 1 cut(s) 395
HpyAV CCTTC 1 cut(s) 401
HpyCH4III ACNGT 3 cut(s) 191, 307, 460
HpyCH4V TGCA 2 cut(s) 152, 276
HpyF10VI GCNNNNNNNGC 1 cut(s) 565
HpyF3I CTNAG 2 cut(s) 263, 555
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 5 cut(s) 94, 148, 434, 539, 550
Kzo9I GATC 1 cut(s) 531
LmnI GCTCC 1 cut(s) 401
LpnPI CCDG 6 cut(s) 41, 100, 127, 221, 250, 355
LweI GCATC 4 cut(s) 161, 216, 277, 285
MaeI CTAG 1 cut(s) 470
MaeIII GTNAC 1 cut(s) 203
MalI GATC 1 cut(s) 533
MboI GATC 1 cut(s) 531
MboII GAAGA 5 cut(s) 3, 79, 130, 235, 437
MflI RGATCY 1 cut(s) 531
MluCI AATT 3 cut(s) 23, 82, 453
MlyI GAGTC 1 cut(s) 167
MmeI TCCRAC 2 cut(s) 186, 526
MnlI CCTC 6 cut(s) 77, 194, 257, 299, 412, 562
Mph1103I ATGCAT 1 cut(s) 154
MroXI GAANNNNTTC 2 cut(s) 27, 86
MslI CAYNNNNRTG 1 cut(s) 545
MspI CCGG 1 cut(s) 342
MspR9I CCNGG 1 cut(s) 115
MvaI CCWGG 1 cut(s) 115
MwoI GCNNNNNNNGC 1 cut(s) 565
NdeII GATC 1 cut(s) 531
NlaIII CATG 5 cut(s) 94, 148, 434, 539, 550
NlaIV GGNNCC 2 cut(s) 403, 533
NmuCI GTSAC 1 cut(s) 203
NsiI ATGCAT 1 cut(s) 154
PdmI GAANNNNTTC 2 cut(s) 27, 86
PkrI GCNGC 3 cut(s) 97, 286, 388
PleI GAGTC 1 cut(s) 166
PpsI GAGTC 1 cut(s) 166
Psp6I CCWGG 1 cut(s) 113
PspEI GGTNACC 1 cut(s) 203
PspGI CCWGG 1 cut(s) 113
PspN4I GGNNCC 2 cut(s) 403, 533
PspPI GGNCC 1 cut(s) 388
PsuI RGATCY 1 cut(s) 531
RsaI GTAC 2 cut(s) 125, 375
RsaNI GTAC 2 cut(s) 124, 374
RseI CAYNNNNRTG 1 cut(s) 545
SatI GCNGC 3 cut(s) 96, 285, 387
Sau3AI GATC 1 cut(s) 531
Sau96I GGNCC 1 cut(s) 388
SchI GAGTC 1 cut(s) 167
ScrFI CCNGG 1 cut(s) 115
SetI ASST 8 cut(s) 77, 132, 183, 205, 384, 423, 554, 561
SfaNI GCATC 4 cut(s) 161, 216, 277, 285
SfcI CTRYAG 1 cut(s) 70
SgrAI CRCCGGYG 1 cut(s) 341
SmiMI CAYNNNNRTG 1 cut(s) 545
Sse9I AATT 3 cut(s) 23, 82, 453
SsiI CCGC 4 cut(s) 95, 282, 285, 386
SspMI CTAG 1 cut(s) 470
StyD4I CCNGG 1 cut(s) 113
StyI CCWWGG 2 cut(s) 177, 405
TaaI ACNGT 3 cut(s) 191, 307, 460
TasI AATT 3 cut(s) 23, 82, 453
TatI WGTACW 2 cut(s) 123, 373
TauI GCSGC 3 cut(s) 98, 287, 389
TscAI CASTG 1 cut(s) 465
TseFI GTSAC 1 cut(s) 203
Tsp45I GTSAC 1 cut(s) 203
TspDTI ATGAA 2 cut(s) 79, 510
TspGWI ACGGA 1 cut(s) 566
TspRI CASTG 1 cut(s) 465
XapI RAATTY 1 cut(s) 82
XmnI GAANNNNTTC 2 cut(s) 27, 86
XspI CTAG 1 cut(s) 470
Zsp2I ATGCAT 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.