Rmu_sc0003808.1_g000015

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003808.1
N/A
Physical Location & Seq
Reverse (-)
78999 .. 84175
5177 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2463 bp
atgttgctcaacacaaattcggctctggggagctattacatggtcggaagagaatacctaagtgctacagttgatacagcatctgacgatgatgctattgcaatccttgaatataatggcaactataccacttcagaagctcctttatttcccgaacaggttcccgattccttatcccaagcaccagcattcaacttctacagaaaaatcagaagcttagccaccccagagtatcctataagtgtcccaaaagagagtgatatcactaccaaaatgtacataacagcttccgccaacgctctttactgtactccagatttaggtcccacatgcgtcaatatatcttttgccgcaagcgtcaataatattagttgggtcaatccgagggaatctatcttgcaagcctactacaacaacataagcgagccggtttatgaaacagatttcccagatgaaccgcctgtttattttaacttcactgcaatagcgatgacactagatccagtgttaacagttcaagggacaaaggtcaaggtgctagaatataatgaaacagttgagatggggtttcaaggaactgatgtgatgggaggttccgtgaatcatccaatgcacctgcatggacatagcttttatgtgcttggttttggttttgggaattacttcgccgagagggactcaaaaaccttcaatttgattgatcctccttatgtagcaacgttcataactccaaaaaatggatgggtagctctcagattcgtagcgaataatccaggtgtatggttttggcattgtcatatggagagacacttgacatggggtatggagtctgcttttatagtgaagaacgggggcacacctgagactactatgctcccccctccggctacaatgcctttgcatggcagctaccagctattcgctgtaagaaagcatggagtaaagcaaccaagaaatccatggtttgatggcccggaatatgtgacacaatgcccaatttcaccgggaacaaattttacctatcaagttcaattgaccacagaagaaggaactgtatggtggcatgctcatagtgactggacgagagctagcgttcacggtaccattgtcgtcttgcctgctcttggaacaacatttccatttcctgagcccgatgaagaggagagcattgtgtttggatcttggtatttgggaaatttgaaacaaacgattgacgagtgtatggtgccagaaaatgctaccaacttacccgaagcagatgcttacacaataaatggccaacctggggattttgctctatgctccaagaattcaacatatcgtcttaaggtggactatggcaagacgtatcttcttcggatactgaacgccaatattgatgcagagatgtactttgctattgctgagcacaatctcactatggttggcatggacggttcctataccaaacccatcaacacaagctacataatgataagccctggacaaacaatggatgtattgctcaacacaaattcgtctctgggcagctattacatggtcgcaagagaatacgtgagtgctacagttaactcagtatctagctatctggatgatgctgttgcaatccttgaatataatggcaactataccacttcggaagctccgatatatcctgaaaaccttcccatgtccttatcccaagaaccagcatacgacttcctcaggaaaattagaagcttagccaccccagaatatcctataaatgtcccaaaagagagtgacgttactaagagaatgtatataacagcttcctccaacgctctttactgtactccagatttaggtcccacatgtgtcaacatatcttgggctgcaagcgtcaataatattagttgggttaatccatcagaatctatcttgcaagcctactacaacaacataagcgaaccagtttatgaaacagacttcccagatgagccgcctgtttattttaacttcactgatgattcatcagcaatagatgtaggcttaacagtccaagggacaaaggtgacgatgctggaatacaatgaaacagttgagatggtgtttcaaggaactgatgtggagggagcggccgtgaatcatccaatgcacgtgcatggacttagcttttatgtgcttggttttggttttgggaattacttcgccgagagggactcaaaaaccttcaatttgattgatcctccttatgtagcaacgttcataactccaaaaaatggatgggtagctctcagattcgtagcgaataatccaggtgtatggttttggcattgtcatatggagagacacttgacatggggtatggagtctgcttttatagtgaagaacgggggcacacctgagactactatgctccctcctccggctacaatgccttcctgtgacgttccattgaagtcttcagccatcctagagaagcaactagaacggactaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

820

Amino Acids

91.48

Weight (kDa)

4.7

Isoelectric Point (pI)

41.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_2 PF07731 149 - 283 4.3e-37 Multicopper oxidase
Cu-oxidase_3 PF07732 308 - 373 4.8e-20 Multicopper oxidase
Cu-oxidase PF00394 389 - 542 2.5e-32 Multicopper oxidase
Cu-oxidase_2 PF07731 650 - 784 8e-35 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 624
Acc36I ACCTGC 1 cut(s) 624
Acc65I GGTACC 1 cut(s) 1100
AccB1I GGYRCC 2 cut(s) 1100, 1225
AccB7I CCANNNNNTGG 2 cut(s) 737, 2240
AccBSI CCGCTC 1 cut(s) 2096
AciI CCGC 5 cut(s) 291, 351, 458, 1961, 2096
AclI AACGTT 2 cut(s) 719, 2222
AclWI GGATC 4 cut(s) 494, 695, 1186, 2198
AcoI YGGCCR 2 cut(s) 1276, 2097
AcsI RAATTY 5 cut(s) 16, 1012, 1195, 1309, 1513
AcuI CTGAAG 2 cut(s) 117, 2409
AcvI CACGTG 1 cut(s) 2119
AfaI GTAC 5 cut(s) 278, 310, 1102, 1391, 1813
AfiI CCNNNNNNNGG 9 cut(s) 320, 737, 883, 902, 1124, 1285, 1823, 2240, 2386
AflII CTTAAG 1 cut(s) 1325
AflIII ACRYGT 1 cut(s) 1832
AjnI CCWGG 4 cut(s) 772, 1282, 1480, 2275
AloI GAACNNNNNNTCC 2 cut(s) 1120, 1152
Alw21I GWGCWC 1 cut(s) 1410
Alw26I GTCTC 5 cut(s) 799, 857, 1524, 2302, 2360
AlwI GGATC 4 cut(s) 494, 695, 1186, 2198
AlwNI CAGNNNCTG 1 cut(s) 83
AoxI GGCC 3 cut(s) 970, 1276, 2097
ApeKI GCWGC 3 cut(s) 906, 1527, 1853
ApoI RAATTY 5 cut(s) 16, 1012, 1195, 1309, 1513
Asp700I GAANNNNTTC 4 cut(s) 159, 662, 1662, 2165
Asp718I GGTACC 1 cut(s) 1100
AspS9I GGNCC 3 cut(s) 323, 971, 1826
AsuC2I CCSGG 2 cut(s) 974, 1005
AsuHPI GGTGA 2 cut(s) 993, 2044
AsuNHI GCTAGC 1 cut(s) 1088
AvaII GGWCC 2 cut(s) 323, 1826
AxyI CCTNAGG 1 cut(s) 1703
BaeGI GKGCMC 2 cut(s) 857, 2360
BaeI ACNNNNGTAYC 2 cut(s) 1092, 1125
BalI TGGCCA 1 cut(s) 1278
BanI GGYRCC 2 cut(s) 1100, 1225
BanII GRGCYC 1 cut(s) 1152
BbrPI CACGTG 1 cut(s) 2119
BbsI GAAGAC 1 cut(s) 2415
Bbv12I GWGCWC 1 cut(s) 1410
BbvI GCAGC 3 cut(s) 918, 1539, 1840
BccI CCATC 9 cut(s) 556, 580, 735, 962, 1460, 1894, 2059, 2238, 2438
BceAI ACGGC 1 cut(s) 2084
BcgI CGANNNNNNTGC 2 cut(s) 1241, 1275
BciT130I CCWGG 4 cut(s) 774, 1284, 1482, 2277
BciVI GTATCC 2 cut(s) 243, 1353
BcnI CCSGG 2 cut(s) 974, 1005
BcoDI GTCTC 5 cut(s) 799, 857, 1524, 2302, 2360
BfaI CTAG 6 cut(s) 497, 539, 1089, 1581, 2435, 2447
BfmI CTRYAG 3 cut(s) 66, 199, 1563
BfrI CTTAAG 1 cut(s) 1325
BfuAI ACCTGC 1 cut(s) 624
BfuI GTATCC 2 cut(s) 243, 1353
BisI GCNGC 6 cut(s) 351, 907, 1528, 1854, 1961, 2097
BlpI GCTNAGC 3 cut(s) 217, 1404, 1720
BlsI GCNGC 6 cut(s) 352, 908, 1529, 1855, 1962, 2098
Bme1390I CCNGG 6 cut(s) 774, 974, 1005, 1284, 1482, 2277
Bme18I GGWCC 2 cut(s) 323, 1826
BmgT120I GGNCC 3 cut(s) 323, 971, 1826
BmiI GGNNCC 7 cut(s) 162, 325, 595, 1102, 1227, 1438, 1828
BmrFI CCNGG 6 cut(s) 774, 974, 1005, 1284, 1482, 2277
BmsI GCATC 6 cut(s) 82, 89, 1249, 1369, 1585, 2028
BmtI GCTAGC 1 cut(s) 1092
BoxI GACNNNNGTC 1 cut(s) 527
BpiI GAAGAC 1 cut(s) 2415
BplI GAGNNNNNCTC 4 cut(s) 662, 694, 2165, 2197
BpmI CTGGAG 2 cut(s) 297, 1800
Bpu10I CCTNAGC 1 cut(s) 1146
Bpu1102I GCTNAGC 3 cut(s) 217, 1404, 1720
BpuMI CCSGG 2 cut(s) 974, 1005
BsaAI YACGTR 2 cut(s) 1555, 2119
BsaJI CCNNGG 5 cut(s) 383, 959, 1283, 1480, 2020
BsaXI ACNNNNNCTCC 4 cut(s) 582, 612, 2085, 2115
Bsc4I CCNNNNNNNGG 9 cut(s) 320, 737, 883, 902, 1124, 1285, 1823, 2240, 2386
Bse118I RCCGGY 1 cut(s) 427
Bse1I ACTGG 3 cut(s) 503, 1082, 1931
Bse21I CCTNAGG 1 cut(s) 1703
BseBI CCWGG 4 cut(s) 774, 1284, 1482, 2277
BseDI CCNNGG 5 cut(s) 383, 959, 1283, 1480, 2020
BseGI GGATG 7 cut(s) 604, 746, 1501, 1597, 2107, 2249, 2430
BseLI CCNNNNNNNGG 9 cut(s) 320, 737, 883, 902, 1124, 1285, 1823, 2240, 2386
BseMII CTCAG 8 cut(s) 766, 852, 1137, 1395, 1587, 1717, 2269, 2355
BseNI ACTGG 3 cut(s) 503, 1082, 1931
BseRI GAGGAG 2 cut(s) 1175, 2373
BseSI GKGCMC 2 cut(s) 857, 2360
BseX3I CGGCCG 1 cut(s) 2097
BseXI GCAGC 3 cut(s) 918, 1539, 1840
Bsh1285I CGRYCG 1 cut(s) 2100
BshFI GGCC 3 cut(s) 972, 1278, 2099
BshNI GGYRCC 2 cut(s) 1100, 1225
BsiEI CGRYCG 1 cut(s) 2100
BsiHKAI GWGCWC 1 cut(s) 1410
BsiSI CCGG 5 cut(s) 428, 884, 974, 1004, 2387
BslFI GGGAC 8 cut(s) 230, 309, 535, 689, 1733, 1812, 2038, 2192
BslI CCNNNNNNNGG 9 cut(s) 320, 737, 883, 902, 1124, 1285, 1823, 2240, 2386
BsmAI GTCTC 5 cut(s) 799, 857, 1524, 2302, 2360
BsmBI CGTCTC 1 cut(s) 1524
BsmFI GGGAC 8 cut(s) 230, 309, 535, 689, 1733, 1812, 2038, 2192
BsmI GAATGC 1 cut(s) 188
BsnI GGCC 3 cut(s) 972, 1278, 2099
Bsp1286I GDGCHC 4 cut(s) 857, 1152, 1410, 2360
Bsp1407I TGTACA 1 cut(s) 276
Bsp143I GATC 4 cut(s) 499, 700, 1178, 2203
Bsp1720I GCTNAGC 3 cut(s) 217, 1404, 1720
Bsp19I CCATGG 1 cut(s) 959
BspACI CCGC 5 cut(s) 291, 351, 458, 1961, 2096
BspANI GGCC 3 cut(s) 972, 1278, 2099
BspCNI CTCAG 8 cut(s) 765, 853, 1138, 1396, 1586, 1716, 2268, 2356
BspLI GGNNCC 7 cut(s) 162, 325, 595, 1102, 1227, 1438, 1828
BspMI ACCTGC 1 cut(s) 624
BspOI GCTAGC 1 cut(s) 1092
BspPI GGATC 4 cut(s) 494, 695, 1186, 2198
BspT107I GGYRCC 2 cut(s) 1100, 1225
BspTI CTTAAG 1 cut(s) 1325
BsrBI CCGCTC 1 cut(s) 2096
BsrFI RCCGGY 1 cut(s) 427
BsrGI TGTACA 1 cut(s) 276
BsrI ACTGG 3 cut(s) 503, 1082, 1931
BssAI RCCGGY 1 cut(s) 427
BssECI CCNNGG 5 cut(s) 383, 959, 1283, 1480, 2020
BssMI GATC 4 cut(s) 499, 700, 1178, 2203
BssT1I CCWWGG 2 cut(s) 959, 2020
Bst2UI CCWGG 4 cut(s) 774, 1284, 1482, 2277
Bst6I CTCTTC 2 cut(s) 43, 1152
BstAFI CTTAAG 1 cut(s) 1325
BstAUI TGTACA 1 cut(s) 276
BstBAI YACGTR 2 cut(s) 1555, 2119
BstC8I GCNNGC 8 cut(s) 355, 402, 425, 1065, 1090, 1119, 1858, 1905
BstDSI CCRYGG 1 cut(s) 959
BstF5I GGATG 7 cut(s) 604, 746, 1501, 1597, 2107, 2249, 2430
BstKTI GATC 4 cut(s) 502, 703, 1181, 2206
BstMAI GTCTC 5 cut(s) 799, 857, 1524, 2302, 2360
BstMBI GATC 4 cut(s) 499, 700, 1178, 2203
BstMCI CGRYCG 1 cut(s) 2100
BstNI CCWGG 4 cut(s) 774, 1284, 1482, 2277
BstNSI RCATGY 3 cut(s) 333, 1067, 1836
BstPAI GACNNNNGTC 1 cut(s) 527
BstSCI CCNGG 6 cut(s) 772, 972, 1003, 1282, 1480, 2275
BstSFI CTRYAG 3 cut(s) 66, 199, 1563
BstSLI GKGCMC 2 cut(s) 857, 2360
BstV1I GCAGC 3 cut(s) 918, 1539, 1840
BstV2I GAAGAC 1 cut(s) 2415
BstX2I RGATCY 2 cut(s) 499, 1178
BstXI CCANNNNNNTGG 2 cut(s) 780, 2283
BstYI RGATCY 2 cut(s) 499, 1178
BstZI CGGCCG 1 cut(s) 2097
Bsu36I CCTNAGG 1 cut(s) 1703
BsuI GTATCC 2 cut(s) 243, 1353
BsuRI GGCC 3 cut(s) 972, 1278, 2099
BtgI CCRYGG 1 cut(s) 959
BtgZI GCGATG 1 cut(s) 503
BtsCI GGATG 7 cut(s) 604, 746, 1501, 1597, 2107, 2249, 2430
BtsI GCAGTG 1 cut(s) 477
BtsIMutI CAGTG 3 cut(s) 477, 510, 1980
BveI ACCTGC 1 cut(s) 624
Cac8I GCNNGC 8 cut(s) 355, 402, 425, 1065, 1090, 1119, 1858, 1905
CaiI CAGNNNCTG 1 cut(s) 83
Cfr10I RCCGGY 1 cut(s) 427
Cfr13I GGNCC 3 cut(s) 323, 971, 1826
CseI GACGC 3 cut(s) 322, 346, 1849
Csp6I GTAC 5 cut(s) 277, 309, 1101, 1390, 1812
CviQI GTAC 5 cut(s) 277, 309, 1101, 1390, 1812
DpnI GATC 4 cut(s) 501, 702, 1180, 2205
DpnII GATC 4 cut(s) 499, 700, 1178, 2203
EaeI YGGCCR 2 cut(s) 1276, 2097
EagI CGGCCG 1 cut(s) 2097
Eam1104I CTCTTC 2 cut(s) 43, 1152
EarI CTCTTC 2 cut(s) 43, 1152
EciI GGCGGA 1 cut(s) 280
EclXI CGGCCG 1 cut(s) 2097
Eco130I CCWWGG 2 cut(s) 959, 2020
Eco24I GRGCYC 1 cut(s) 1152
Eco32I GATATC 1 cut(s) 262
Eco47I GGWCC 2 cut(s) 323, 1826
Eco52I CGGCCG 1 cut(s) 2097
Eco57I CTGAAG 2 cut(s) 117, 2409
Eco72I CACGTG 1 cut(s) 2119
Eco81I CCTNAGG 1 cut(s) 1703
EcoO109I RGGNCCY 2 cut(s) 323, 1826
EcoRI GAATTC 1 cut(s) 1309
EcoRII CCWGG 4 cut(s) 772, 1282, 1480, 2275
EcoRV GATATC 1 cut(s) 262
EcoT14I CCWWGG 2 cut(s) 959, 2020
EcoT38I GRGCYC 1 cut(s) 1152
ErhI CCWWGG 2 cut(s) 959, 2020
Esp3I CGTCTC 1 cut(s) 1524
FaqI GGGAC 8 cut(s) 230, 309, 535, 689, 1733, 1812, 2038, 2192
FauNDI CATATG 2 cut(s) 798, 2301
Fnu4HI GCNGC 6 cut(s) 351, 907, 1528, 1854, 1961, 2097
FokI GGATG 7 cut(s) 591, 753, 1508, 1604, 2094, 2256, 2417
FriOI GRGCYC 1 cut(s) 1152
Fsp4HI GCNGC 6 cut(s) 351, 907, 1528, 1854, 1961, 2097
FspBI CTAG 6 cut(s) 497, 539, 1089, 1581, 2435, 2447
GluI GCNGC 6 cut(s) 351, 907, 1528, 1854, 1961, 2097
GsuI CTGGAG 2 cut(s) 297, 1800
HaeIII GGCC 3 cut(s) 972, 1278, 2099
HapII CCGG 5 cut(s) 428, 884, 974, 1004, 2387
HgaI GACGC 3 cut(s) 322, 346, 1849
HincII GTYRAC 3 cut(s) 510, 1570, 1840
HindII GTYRAC 3 cut(s) 510, 1570, 1840
HindIII AAGCTT 2 cut(s) 214, 1717
HpaI GTTAAC 2 cut(s) 510, 1570
HpaII CCGG 5 cut(s) 428, 884, 974, 1004, 2387
HphI GGTGA 2 cut(s) 993, 2044
Hpy166II GTNNAC 5 cut(s) 510, 1096, 1333, 1570, 1840
Hpy188III TCNNGA 8 cut(s) 152, 164, 314, 1145, 1589, 1655, 1705, 1817
Hpy8I GTNNAC 5 cut(s) 510, 1096, 1333, 1570, 1840
HpyAV CCTTC 5 cut(s) 697, 1040, 1673, 2200, 2409
HpyCH4IV ACGT 7 cut(s) 719, 1346, 1554, 1764, 2118, 2222, 2409
HpySE526I ACGT 7 cut(s) 719, 1346, 1554, 1764, 2118, 2222, 2409
KpnI GGTACC 1 cut(s) 1104
KspAI GTTAAC 2 cut(s) 510, 1570
Kzo9I GATC 4 cut(s) 499, 700, 1178, 2203
LmnI GCTCC 7 cut(s) 30, 145, 879, 1307, 1648, 2093, 2382
Lsp1109I GCAGC 3 cut(s) 918, 1539, 1840
LweI GCATC 6 cut(s) 82, 89, 1249, 1369, 1585, 2028
MaeI CTAG 6 cut(s) 497, 539, 1089, 1581, 2435, 2447
MaeII ACGT 7 cut(s) 719, 1346, 1554, 1764, 2118, 2222, 2409
MaeIII GTNAC 6 cut(s) 982, 1073, 1760, 1765, 2032, 2405
MalI GATC 4 cut(s) 501, 702, 1180, 2205
MbiI CCGCTC 1 cut(s) 2096
MboI GATC 4 cut(s) 499, 700, 1178, 2203
MboII GAAGA 8 cut(s) 60, 856, 1055, 1169, 1343, 1346, 2359, 2415
MfeI CAATTG 1 cut(s) 1031
MflI RGATCY 2 cut(s) 499, 1178
MhlI GDGCHC 4 cut(s) 857, 1152, 1410, 2360
MlsI TGGCCA 1 cut(s) 1278
MluNI TGGCCA 1 cut(s) 1278
MlyI GAGTC 4 cut(s) 671, 836, 2174, 2339
MmeI TCCRAC 2 cut(s) 25, 1821
Mox20I TGGCCA 1 cut(s) 1278
MroXI GAANNNNTTC 4 cut(s) 159, 662, 1662, 2165
MscI TGGCCA 1 cut(s) 1278
MseI TTAA 8 cut(s) 471, 509, 1326, 1569, 1881, 1974, 2012, 2461
MslI CAYNNNNRTG 2 cut(s) 618, 2121
Msp20I TGGCCA 1 cut(s) 1278
MspCI CTTAAG 1 cut(s) 1325
MspI CCGG 5 cut(s) 428, 884, 974, 1004, 2387
MspR9I CCNGG 6 cut(s) 774, 974, 1005, 1284, 1482, 2277
MunI CAATTG 1 cut(s) 1031
Mva1269I GAATGC 1 cut(s) 188
MvaI CCWGG 4 cut(s) 774, 1284, 1482, 2277
NciI CCSGG 2 cut(s) 974, 1005
NcoI CCATGG 1 cut(s) 959
NdeI CATATG 2 cut(s) 798, 2301
NdeII GATC 4 cut(s) 499, 700, 1178, 2203
NheI GCTAGC 1 cut(s) 1088
NlaIV GGNNCC 7 cut(s) 162, 325, 595, 1102, 1227, 1438, 1828
NmeAIII GCCGAG 2 cut(s) 694, 2197
NmuCI GTSAC 5 cut(s) 982, 1073, 1760, 2032, 2405
NspI RCATGY 3 cut(s) 333, 1067, 1836
PaeI GCATGC 1 cut(s) 1067
PaqCI CACCTGC 1 cut(s) 624
PciI ACATGT 1 cut(s) 1832
PcsI WCGNNNNNNNCGW 1 cut(s) 1643
PctI GAATGC 1 cut(s) 188
PdmI GAANNNNTTC 4 cut(s) 159, 662, 1662, 2165
PfeI GAWTC 8 cut(s) 167, 389, 601, 756, 1892, 1988, 2104, 2259
PflMI CCANNNNNTGG 2 cut(s) 737, 2240
PkrI GCNGC 6 cut(s) 352, 908, 1529, 1855, 1962, 2098
PleI GAGTC 4 cut(s) 671, 835, 2174, 2338
PmaCI CACGTG 1 cut(s) 2119
PmlI CACGTG 1 cut(s) 2119
PpsI GAGTC 4 cut(s) 671, 835, 2174, 2338
Ppu21I YACGTR 2 cut(s) 1555, 2119
PpuMI RGGWCCY 2 cut(s) 323, 1826
PscI ACATGT 1 cut(s) 1832
PshAI GACNNNNGTC 1 cut(s) 527
Psp1406I AACGTT 2 cut(s) 719, 2222
Psp5II RGGWCCY 2 cut(s) 323, 1826
Psp6I CCWGG 4 cut(s) 772, 1282, 1480, 2275
PspCI CACGTG 1 cut(s) 2119
PspGI CCWGG 4 cut(s) 772, 1282, 1480, 2275
PspN4I GGNNCC 7 cut(s) 162, 325, 595, 1102, 1227, 1438, 1828
PspPI GGNCC 3 cut(s) 323, 971, 1826
PspPPI RGGWCCY 2 cut(s) 323, 1826
PsrI GAACNNNNNNTAC 2 cut(s) 1000, 1032
PstNI CAGNNNCTG 1 cut(s) 83
PsuI RGATCY 2 cut(s) 499, 1178
RsaI GTAC 5 cut(s) 278, 310, 1102, 1391, 1813
RsaNI GTAC 5 cut(s) 277, 309, 1101, 1390, 1812
RseI CAYNNNNRTG 2 cut(s) 618, 2121
SaqAI TTAA 8 cut(s) 471, 509, 1326, 1569, 1881, 1974, 2012, 2461
SatI GCNGC 6 cut(s) 351, 907, 1528, 1854, 1961, 2097
Sau3AI GATC 4 cut(s) 499, 700, 1178, 2203
Sau96I GGNCC 3 cut(s) 323, 971, 1826
SchI GAGTC 4 cut(s) 671, 836, 2174, 2339
ScrFI CCNGG 6 cut(s) 774, 974, 1005, 1284, 1482, 2277
SduI GDGCHC 4 cut(s) 857, 1152, 1410, 2360
SfaNI GCATC 6 cut(s) 82, 89, 1249, 1369, 1585, 2028
SfcI CTRYAG 3 cut(s) 66, 199, 1563
SinI GGWCC 2 cut(s) 323, 1826
SmiMI CAYNNNNRTG 2 cut(s) 618, 2121
SmlI CTYRAG 1 cut(s) 1325
SmoI CTYRAG 1 cut(s) 1325
SphI GCATGC 1 cut(s) 1067
SsiI CCGC 5 cut(s) 291, 351, 458, 1961, 2096
SspI AATATT 3 cut(s) 367, 1375, 1870
SspMI CTAG 6 cut(s) 497, 539, 1089, 1581, 2435, 2447
StyD4I CCNGG 6 cut(s) 772, 972, 1003, 1282, 1480, 2275
StyI CCWWGG 2 cut(s) 959, 2020
TaiI ACGT 7 cut(s) 722, 1349, 1557, 1767, 2121, 2225, 2412
TatI WGTACW 4 cut(s) 276, 308, 1389, 1811
TauI GCSGC 3 cut(s) 353, 1963, 2099
TfiI GAWTC 8 cut(s) 167, 389, 601, 756, 1892, 1988, 2104, 2259
Tru1I TTAA 8 cut(s) 471, 509, 1326, 1569, 1881, 1974, 2012, 2461
Tru9I TTAA 8 cut(s) 471, 509, 1326, 1569, 1881, 1974, 2012, 2461
TscAI CASTG 3 cut(s) 484, 510, 1987
TseFI GTSAC 5 cut(s) 982, 1073, 1760, 2032, 2405
TseI GCWGC 3 cut(s) 906, 1527, 1853
Tsp45I GTSAC 5 cut(s) 982, 1073, 1760, 2032, 2405
TspDTI ATGAA 9 cut(s) 450, 468, 564, 712, 1170, 1953, 1980, 2067, 2215
TspGWI ACGGA 1 cut(s) 586
TspRI CASTG 3 cut(s) 484, 510, 1987
Van91I CCANNNNNTGG 2 cut(s) 737, 2240
Vha464I CTTAAG 1 cut(s) 1325
VpaK11BI GGWCC 2 cut(s) 323, 1826
XapI RAATTY 5 cut(s) 16, 1012, 1195, 1309, 1513
XceI RCATGY 3 cut(s) 333, 1067, 1836
XcmI CCANNNNNNNNNTGG 3 cut(s) 738, 957, 2241
XmnI GAANNNNTTC 4 cut(s) 159, 662, 1662, 2165
XspI CTAG 6 cut(s) 497, 539, 1089, 1581, 2435, 2447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.