Rmu_sc0003848.1_g000021

acid phosphatase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003848.1
N/A
Physical Location & Seq
Reverse (-)
77895 .. 83121
5227 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1581 bp
atggagctatatatatcccaccagattcatctcctcaggccacaaactggttccggtggaaggcacgtccccggcatttcatgcctgagctggagactaggtgttgaaacccacaacatcgttggctggacgactgttccagctgtctgtgaaggctatgttgggcactacatgctaggcaaccagtatagacaggactcgagagctgttactaatgaggctttgctctacgctaagagcctgaaccttacaaaggacggcaagaacttgtgggtcttcgacatcgatgagactactctctccaatctgccttattattctcaccatggattcggagtagaggtatataattccacttcattcgacgcctgggtcttagaaggcacggccccagctttgcctgagagtcttaaactgtacaataagttattagctcttggaattaaggtagcattcataactggaagaggaatctctcaaagaagtgtcacagaaatcaatctcaaatacgttggatatcacacatgggaaaagcttgtgctaaagaattcatcttattctggtaacacatctgctgtgtataaatcatcggagagaaaggaacttgaaaagagtggatatagaataattgggaacattggtgatcaatggagcgatctcttaggcacaaatgtgggcgaccggaccttcaagttgcctgatccaatgtattacattagttcaacaacagaaaggcatgggcagggcaaccggattttggatccatgcgacggtggctatgcagaaacctttgttgagggcagcatgctgagacttgttcttgttttggtttcgggttgcagggcagtcttcatcctatgggtggtggtgcttgatggaggttttgttttcttgaagctagatggtggtgacgtcttcggtgggtcgtggtggcacatctggtgggagtctgacatggaggcaggttgtggagctttggatgggccggatctagagcggaagtcctcactgtcgctaaagtgcggacagcgccactgcaactgcgttcaggcgccgacggaaaggcatgggcagggcaaccggattttggatccatgcgacggtggctatgcagaaacctttgttgagggcagcatgctgagacttgttcttgttttggtttcgggttgcagggcagtctttatcctatgggtggtggtgcttgatggaggttttgttttcttgaagctagatggtggtgacgtcttcggtgggtcgtggtggcacatctggtgggagtctgacatggaggcaggttgtggagatttggatgggccggatctagagcgaaagtccgcactgtcgctaaagtgcggacagcgccactgcaactgcgttcaggcgccgacggtagctcgaatcttgcctaacggaggccagaggcatcccggaccacttctgaacagcgatcgaggtcgaaggagatcgaggttgaaggttctaggcagcgacctcacctgcaactttaaggttctgggtagtgactgcaaactgatatccggcgactcgaccaacaagaagaaggtcgagatcgacccttga

Protein Analysis

526

Amino Acids

58.15

Weight (kDa)

6.57

Isoelectric Point (pI)

33.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acid_phosphat_B PF03767 25 - 239 6.2e-82 HAD superfamily, subfamily IIIB (Acid phosphatase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1505
AasI GACNNNNNNGTC 1 cut(s) 371
AatII GACGTC 2 cut(s) 915, 1245
Acc36I ACCTGC 3 cut(s) 953, 1283, 1505
AccB1I GGYRCC 2 cut(s) 1051, 1381
AccB7I CCANNNNNTGG 1 cut(s) 47
AccBSI CCGCTC 1 cut(s) 997
AciI CCGC 4 cut(s) 997, 1023, 1335, 1353
AclWI GGATC 7 cut(s) 695, 755, 768, 996, 1085, 1098, 1326
AcsI RAATTY 1 cut(s) 547
AcyI GRCGYC 5 cut(s) 366, 912, 1052, 1242, 1382
AfaI GTAC 1 cut(s) 419
AgsI TTSAA 7 cut(s) 107, 608, 691, 723, 895, 1225, 1474
AjiI CACGTC 1 cut(s) 67
AjnI CCWGG 1 cut(s) 368
AjuI GAANNNNNNNTTGG 2 cut(s) 144, 176
AleI CACNNNNGTG 1 cut(s) 671
Alw26I GTCTC 4 cut(s) 88, 284, 805, 1135
AlwI GGATC 7 cut(s) 695, 755, 768, 996, 1085, 1098, 1326
Ama87I CYCGRG 1 cut(s) 199
AoxI GGCC 5 cut(s) 38, 387, 983, 1313, 1414
ApeKI GCWGC 3 cut(s) 801, 1131, 1485
ApoI RAATTY 1 cut(s) 547
AspLEI GCGC 4 cut(s) 1032, 1054, 1362, 1384
AspS9I GGNCC 5 cut(s) 388, 684, 983, 1313, 1430
AsuC2I CCSGG 2 cut(s) 72, 1428
AsuHPI GGTGA 5 cut(s) 314, 653, 920, 1250, 1486
AvaI CYCGRG 1 cut(s) 199
AvaII GGWCC 2 cut(s) 684, 1430
AxyI CCTNAGG 1 cut(s) 35
BaeGI GKGCMC 1 cut(s) 168
BamHI GGATCC 2 cut(s) 760, 1090
BanI GGYRCC 2 cut(s) 1051, 1381
BbsI GAAGAC 4 cut(s) 268, 841, 907, 1237
BbvI GCAGC 3 cut(s) 813, 1143, 1497
BccI CCATC 6 cut(s) 869, 896, 974, 1199, 1226, 1304
BceAI ACGGC 2 cut(s) 274, 402
BciT130I CCWGG 1 cut(s) 370
BclI TGATCA 1 cut(s) 643
BcnI CCSGG 2 cut(s) 72, 1428
BcoDI GTCTC 4 cut(s) 88, 284, 805, 1135
BfaI CTAG 7 cut(s) 98, 176, 899, 992, 1229, 1322, 1481
BfoI RGCGCY 4 cut(s) 1033, 1055, 1363, 1385
BfuAI ACCTGC 3 cut(s) 953, 1283, 1505
BisI GCNGC 3 cut(s) 802, 1132, 1486
BlsI GCNGC 3 cut(s) 803, 1133, 1487
Bme1390I CCNGG 3 cut(s) 72, 370, 1428
Bme18I GGWCC 2 cut(s) 684, 1430
BmeT110I CYCGRG 1 cut(s) 199
BmgBI CACGTC 1 cut(s) 67
BmgT120I GGNCC 5 cut(s) 388, 684, 983, 1313, 1430
BmiI GGNNCC 6 cut(s) 52, 390, 762, 1053, 1092, 1383
BmrFI CCNGG 3 cut(s) 72, 370, 1428
BmsI GCATC 1 cut(s) 1432
BpiI GAAGAC 4 cut(s) 268, 841, 907, 1237
BpmI CTGGAG 1 cut(s) 112
Bpu10I CCTNAGC 1 cut(s) 86
BpuMI CCSGG 2 cut(s) 72, 1428
Bsa29I ATCGAT 1 cut(s) 285
BsaHI GRCGYC 5 cut(s) 366, 912, 1052, 1242, 1382
BsaJI CCNNGG 3 cut(s) 70, 325, 369
BsaWI WCCGGW 4 cut(s) 53, 681, 750, 1080
BsaXI ACNNNNNCTCC 8 cut(s) 85, 115, 327, 357, 870, 900, 1200, 1230
Bse1I ACTGG 3 cut(s) 52, 184, 466
Bse21I CCTNAGG 1 cut(s) 35
BseBI CCWGG 1 cut(s) 370
BseCI ATCGAT 1 cut(s) 285
BseDI CCNNGG 3 cut(s) 70, 325, 369
BseGI GGATG 4 cut(s) 852, 985, 1315, 1423
BseMII CTCAG 5 cut(s) 49, 77, 393, 800, 1130
BseNI ACTGG 3 cut(s) 52, 184, 466
BseRI GAGGAG 1 cut(s) 23
BseSI GKGCMC 1 cut(s) 168
BseXI GCAGC 3 cut(s) 813, 1143, 1497
BseYI CCCAGC 1 cut(s) 391
Bsh1285I CGRYCG 2 cut(s) 682, 1450
BshFI GGCC 5 cut(s) 40, 389, 985, 1315, 1416
BshNI GGYRCC 2 cut(s) 1051, 1381
BshVI ATCGAT 1 cut(s) 285
BsiEI CGRYCG 2 cut(s) 682, 1450
BsiHKCI CYCGRG 1 cut(s) 199
BsiSI CCGG 9 cut(s) 54, 72, 682, 751, 986, 1081, 1316, 1428, 1539
BslFI GGGAC 1 cut(s) 53
BsmAI GTCTC 4 cut(s) 88, 284, 805, 1135
BsmFI GGGAC 1 cut(s) 53
BsmI GAATGC 1 cut(s) 452
BsnI GGCC 5 cut(s) 40, 389, 985, 1315, 1416
BsoBI CYCGRG 1 cut(s) 199
Bsp1286I GDGCHC 1 cut(s) 168
Bsp1407I TGTACA 1 cut(s) 417
Bsp19I CCATGG 1 cut(s) 325
BspACI CCGC 4 cut(s) 997, 1023, 1335, 1353
BspANI GGCC 5 cut(s) 40, 389, 985, 1315, 1416
BspCNI CTCAG 5 cut(s) 48, 78, 394, 801, 1131
BspDI ATCGAT 1 cut(s) 285
BspLI GGNNCC 6 cut(s) 52, 390, 762, 1053, 1092, 1383
BspMI ACCTGC 3 cut(s) 953, 1283, 1505
BspPI GGATC 7 cut(s) 695, 755, 768, 996, 1085, 1098, 1326
BspT107I GGYRCC 2 cut(s) 1051, 1381
BsrBI CCGCTC 1 cut(s) 997
BsrGI TGTACA 1 cut(s) 417
BsrI ACTGG 3 cut(s) 52, 184, 466
BssECI CCNNGG 3 cut(s) 70, 325, 369
BssNI GRCGYC 5 cut(s) 366, 912, 1052, 1242, 1382
BssT1I CCWWGG 1 cut(s) 325
Bst2UI CCWGG 1 cut(s) 370
Bst4CI ACNGT 7 cut(s) 136, 417, 773, 1011, 1103, 1341, 1390
Bst6I CTCTTC 1 cut(s) 460
BstACI GRCGYC 5 cut(s) 366, 912, 1052, 1242, 1382
BstAPI GCANNNNNTGC 2 cut(s) 81, 172
BstAUI TGTACA 1 cut(s) 417
BstC8I GCNNGC 2 cut(s) 806, 1136
BstDEI CTNAG 8 cut(s) 35, 86, 234, 376, 402, 661, 809, 1139
BstDSI CCRYGG 1 cut(s) 325
BstENI CCTNNNNNAGG 2 cut(s) 251, 1410
BstF5I GGATG 4 cut(s) 852, 985, 1315, 1423
BstH2I RGCGCY 4 cut(s) 1033, 1055, 1363, 1385
BstHHI GCGC 4 cut(s) 1032, 1054, 1362, 1384
BstMAI GTCTC 4 cut(s) 88, 284, 805, 1135
BstMCI CGRYCG 2 cut(s) 682, 1450
BstMWI GCNNNNNNNGC 6 cut(s) 81, 172, 774, 1029, 1104, 1359
BstNI CCWGG 1 cut(s) 370
BstNSI RCATGY 3 cut(s) 175, 808, 1138
BstSCI CCNGG 3 cut(s) 70, 368, 1426
BstSLI GKGCMC 1 cut(s) 168
BstV1I GCAGC 3 cut(s) 813, 1143, 1497
BstV2I GAAGAC 4 cut(s) 268, 841, 907, 1237
BstX2I RGATCY 4 cut(s) 760, 988, 1090, 1318
BstYI RGATCY 4 cut(s) 760, 988, 1090, 1318
Bsu15I ATCGAT 1 cut(s) 285
Bsu36I CCTNAGG 1 cut(s) 35
BsuRI GGCC 5 cut(s) 40, 389, 985, 1315, 1416
BsuTUI ATCGAT 1 cut(s) 285
BtgI CCRYGG 1 cut(s) 325
BtrI CACGTC 1 cut(s) 67
BtsCI GGATG 4 cut(s) 852, 985, 1315, 1423
BtsI GCAGTG 2 cut(s) 1033, 1363
BtsIMutI CAGTG 4 cut(s) 1007, 1033, 1337, 1363
BveI ACCTGC 3 cut(s) 953, 1283, 1505
Cac8I GCNNGC 2 cut(s) 806, 1136
CfoI GCGC 4 cut(s) 1032, 1054, 1362, 1384
Cfr13I GGNCC 5 cut(s) 388, 684, 983, 1313, 1430
ClaI ATCGAT 1 cut(s) 285
CseI GACGC 1 cut(s) 374
Csp6I GTAC 1 cut(s) 418
CviQI GTAC 1 cut(s) 418
DdeI CTNAG 8 cut(s) 35, 86, 234, 376, 402, 661, 809, 1139
DinI GGCGCC 2 cut(s) 1053, 1383
DrdI GACNNNNNNGTC 1 cut(s) 371
DseDI GACNNNNNNGTC 1 cut(s) 371
Eam1104I CTCTTC 1 cut(s) 460
EarI CTCTTC 1 cut(s) 460
Eco130I CCWWGG 1 cut(s) 325
Eco32I GATATC 2 cut(s) 518, 1536
Eco47I GGWCC 2 cut(s) 684, 1430
Eco81I CCTNAGG 1 cut(s) 35
Eco88I CYCGRG 1 cut(s) 199
EcoNI CCTNNNNNAGG 2 cut(s) 251, 1410
EcoRI GAATTC 1 cut(s) 547
EcoRII CCWGG 1 cut(s) 368
EcoRV GATATC 2 cut(s) 518, 1536
EcoT14I CCWWGG 1 cut(s) 325
EgeI GGCGCC 2 cut(s) 1053, 1383
EheI GGCGCC 2 cut(s) 1053, 1383
ErhI CCWWGG 1 cut(s) 325
FaqI GGGAC 1 cut(s) 53
FbaI TGATCA 1 cut(s) 643
Fnu4HI GCNGC 3 cut(s) 802, 1132, 1486
FokI GGATG 4 cut(s) 839, 992, 1322, 1410
Fsp4HI GCNGC 3 cut(s) 802, 1132, 1486
FspBI CTAG 7 cut(s) 98, 176, 899, 992, 1229, 1322, 1481
GlaI GCGC 4 cut(s) 1031, 1053, 1361, 1383
GluI GCNGC 3 cut(s) 802, 1132, 1486
GsaI CCCAGC 1 cut(s) 395
GsuI CTGGAG 1 cut(s) 112
HaeII RGCGCY 4 cut(s) 1033, 1055, 1363, 1385
HaeIII GGCC 5 cut(s) 40, 389, 985, 1315, 1416
HapII CCGG 9 cut(s) 54, 72, 682, 751, 986, 1081, 1316, 1428, 1539
HgaI GACGC 1 cut(s) 374
HhaI GCGC 4 cut(s) 1032, 1054, 1362, 1384
Hin1I GRCGYC 5 cut(s) 366, 912, 1052, 1242, 1382
Hin6I GCGC 4 cut(s) 1030, 1052, 1360, 1382
HinP1I GCGC 4 cut(s) 1030, 1052, 1360, 1382
HindIII AAGCTT 1 cut(s) 533
HinfI GANTC 9 cut(s) 25, 197, 330, 406, 471, 947, 1277, 1398, 1544
HpaII CCGG 9 cut(s) 54, 72, 682, 751, 986, 1081, 1316, 1428, 1539
HphI GGTGA 5 cut(s) 314, 653, 920, 1250, 1486
Hpy188I TCNGA 5 cut(s) 335, 592, 952, 1282, 1440
Hpy188III TCNNGA 6 cut(s) 201, 892, 992, 1222, 1322, 1567
Hpy99I CGWCG 5 cut(s) 368, 773, 1060, 1103, 1390
HpyAV CCTTC 7 cut(s) 54, 146, 374, 697, 1452, 1468, 1555
HpyCH4III ACNGT 7 cut(s) 136, 417, 773, 1011, 1103, 1341, 1390
HpyCH4IV ACGT 4 cut(s) 66, 510, 912, 1242
HpyCH4V TGCA 8 cut(s) 782, 840, 1038, 1112, 1170, 1368, 1500, 1527
HpyF10VI GCNNNNNNNGC 6 cut(s) 81, 172, 774, 1029, 1104, 1359
HpyF3I CTNAG 8 cut(s) 35, 86, 234, 376, 402, 661, 809, 1139
HpySE526I ACGT 4 cut(s) 66, 510, 912, 1242
Hsp92I GRCGYC 5 cut(s) 366, 912, 1052, 1242, 1382
HspAI GCGC 4 cut(s) 1030, 1052, 1360, 1382
KasI GGCGCC 2 cut(s) 1051, 1381
Ksp22I TGATCA 1 cut(s) 643
LmnI GCTCC 3 cut(s) 4, 651, 971
Lsp1109I GCAGC 3 cut(s) 813, 1143, 1497
LweI GCATC 1 cut(s) 1432
MaeI CTAG 7 cut(s) 98, 176, 899, 992, 1229, 1322, 1481
MaeII ACGT 4 cut(s) 66, 510, 912, 1242
MaeIII GTNAC 6 cut(s) 208, 487, 563, 908, 1238, 1520
MbiI CCGCTC 1 cut(s) 997
MboII GAAGA 6 cut(s) 268, 477, 841, 907, 1237, 1570
MflI RGATCY 4 cut(s) 760, 988, 1090, 1318
MhlI GDGCHC 1 cut(s) 168
MluCI AATT 4 cut(s) 349, 441, 547, 627
Mly113I GGCGCC 2 cut(s) 1052, 1382
MlyI GAGTC 5 cut(s) 191, 415, 956, 1286, 1538
MmeI TCCRAC 1 cut(s) 493
MseI TTAA 3 cut(s) 411, 444, 1506
MslI CAYNNNNRTG 1 cut(s) 671
MspA1I CMGCKG 1 cut(s) 143
MspI CCGG 9 cut(s) 54, 72, 682, 751, 986, 1081, 1316, 1428, 1539
MspR9I CCNGG 3 cut(s) 72, 370, 1428
Mva1269I GAATGC 1 cut(s) 452
MvaI CCWGG 1 cut(s) 370
MwoI GCNNNNNNNGC 6 cut(s) 81, 172, 774, 1029, 1104, 1359
NarI GGCGCC 2 cut(s) 1052, 1382
NciI CCSGG 2 cut(s) 72, 1428
NcoI CCATGG 1 cut(s) 325
NlaIV GGNNCC 6 cut(s) 52, 390, 762, 1053, 1092, 1383
NmuCI GTSAC 4 cut(s) 487, 908, 1238, 1520
NspI RCATGY 3 cut(s) 175, 808, 1138
OliI CACNNNNGTG 1 cut(s) 671
PaeI GCATGC 2 cut(s) 808, 1138
PaeR7I CTCGAG 1 cut(s) 199
PaqCI CACCTGC 1 cut(s) 1505
PctI GAATGC 1 cut(s) 452
PfeI GAWTC 4 cut(s) 25, 330, 471, 1398
PflMI CCANNNNNTGG 1 cut(s) 47
PfoI TCCNGGA 1 cut(s) 1426
PkrI GCNGC 3 cut(s) 803, 1133, 1487
Ple19I CGATCG 1 cut(s) 1450
PleI GAGTC 5 cut(s) 191, 414, 955, 1285, 1538
PluTI GGCGCC 2 cut(s) 1055, 1385
PpsI GAGTC 5 cut(s) 191, 414, 955, 1285, 1538
Psp6I CCWGG 1 cut(s) 368
PspFI CCCAGC 1 cut(s) 391
PspGI CCWGG 1 cut(s) 368
PspN4I GGNNCC 6 cut(s) 52, 390, 762, 1053, 1092, 1383
PspPI GGNCC 5 cut(s) 388, 684, 983, 1313, 1430
PsuI RGATCY 4 cut(s) 760, 988, 1090, 1318
PvuI CGATCG 1 cut(s) 1450
PvuII CAGCTG 1 cut(s) 143
RsaI GTAC 1 cut(s) 419
RsaNI GTAC 1 cut(s) 418
RseI CAYNNNNRTG 1 cut(s) 671
SaqAI TTAA 3 cut(s) 411, 444, 1506
SatI GCNGC 3 cut(s) 802, 1132, 1486
Sau96I GGNCC 5 cut(s) 388, 684, 983, 1313, 1430
SchI GAGTC 5 cut(s) 191, 415, 956, 1286, 1538
ScrFI CCNGG 3 cut(s) 72, 370, 1428
SduI GDGCHC 1 cut(s) 168
SfaNI GCATC 1 cut(s) 1432
SfoI GGCGCC 2 cut(s) 1053, 1383
Sfr274I CTCGAG 1 cut(s) 199
SinI GGWCC 2 cut(s) 684, 1430
SlaI CTCGAG 1 cut(s) 199
SmiMI CAYNNNNRTG 1 cut(s) 671
SmlI CTYRAG 1 cut(s) 199
SmoI CTYRAG 1 cut(s) 199
SphI GCATGC 2 cut(s) 808, 1138
Sse9I AATT 4 cut(s) 349, 441, 547, 627
SsiI CCGC 4 cut(s) 997, 1023, 1335, 1353
SspDI GGCGCC 2 cut(s) 1051, 1381
SspMI CTAG 7 cut(s) 98, 176, 899, 992, 1229, 1322, 1481
StyD4I CCNGG 3 cut(s) 70, 368, 1426
StyI CCWWGG 1 cut(s) 325
TaaI ACNGT 7 cut(s) 136, 417, 773, 1011, 1103, 1341, 1390
TaiI ACGT 4 cut(s) 69, 513, 915, 1245
TasI AATT 4 cut(s) 349, 441, 547, 627
TatI WGTACW 1 cut(s) 417
TfiI GAWTC 4 cut(s) 25, 330, 471, 1398
Tru1I TTAA 3 cut(s) 411, 444, 1506
Tru9I TTAA 3 cut(s) 411, 444, 1506
TscAI CASTG 4 cut(s) 1014, 1040, 1344, 1370
TseFI GTSAC 4 cut(s) 487, 908, 1238, 1520
TseI GCWGC 3 cut(s) 801, 1131, 1485
Tsp45I GTSAC 4 cut(s) 487, 908, 1238, 1520
TspDTI ATGAA 6 cut(s) 17, 69, 348, 445, 540, 841
TspGWI ACGGA 2 cut(s) 1073, 1425
TspRI CASTG 4 cut(s) 1014, 1040, 1344, 1370
Van91I CCANNNNNTGG 1 cut(s) 47
VpaK11BI GGWCC 2 cut(s) 684, 1430
XagI CCTNNNNNAGG 2 cut(s) 251, 1410
XapI RAATTY 1 cut(s) 547
XbaI TCTAGA 2 cut(s) 991, 1321
XceI RCATGY 3 cut(s) 175, 808, 1138
XcmI CCANNNNNNNNNTGG 1 cut(s) 119
XhoI CTCGAG 1 cut(s) 199
XspI CTAG 7 cut(s) 98, 176, 899, 992, 1229, 1322, 1481
ZraI GACGTC 2 cut(s) 913, 1243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.